RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-212	ENST00000483617	PHKA1	P46020	1223 aa		13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	CDAN1	Q8IWY9	1227 aa		13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	ANKRD13A	Q8IZ07	590 aa		13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	SLC10A4	Q96EP9	437 aa		13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	WNK4	Q96J92	1243 aa		13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	ESYT1	Q9BSJ8	1104 aa		13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	MRI	Q9BWK5	157 aa		13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	TMEM39B	Q9GZU3	492 aa		13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	SNRK	Q9NRH2	765 aa		13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	TMOD2	Q9NZR1	351 aa		13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	DENND2A	Q9ULE3	1009 aa		13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	MANSC4	A6NHS7	340 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPN18-212	ENST00000483617	CCDC85C	A6NKD9	419 aa		13.66	□□□□□ -0.22
PTPN18-212	ENST00000483617	TBC1D8	O95759	1140 aa		13.66	□□□□□ -0.22
PTPN18-212	ENST00000483617	CACNB3	P54284	484 aa		13.66	□□□□□ -0.22
PTPN18-212	ENST00000483617	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.66	□□□□□ -0.22
PTPN18-212	ENST00000483617	HHIPL2	Q6UWX4	724 aa		13.66	□□□□□ -0.22
PTPN18-212	ENST00000483617	SPATA5	Q8NB90	893 aa		13.66	□□□□□ -0.22
PTPN18-212	ENST00000483617	RAD50	Q92878	1312 aa		13.65	□□□□□ -0.22
PTPN18-212	ENST00000483617	EPB41L2	O43491	1005 aa	Known RBP	13.65	□□□□□ -0.22
PTPN18-212	ENST00000483617	MCAM	P43121	646 aa		13.65	□□□□□ -0.22
PTPN18-212	ENST00000483617	MAP3K12	Q12852	859 aa		13.65	□□□□□ -0.22
PTPN18-212	ENST00000483617	CWC27	Q6UX04	472 aa	Known RBP	13.65	□□□□□ -0.22
PTPN18-212	ENST00000483617	CTU1	Q7Z7A3	348 aa	Known RBP	13.65	□□□□□ -0.22
PTPN18-212	ENST00000483617	CFHR5	Q9BXR6	569 aa		13.65	□□□□□ -0.22
PTPN18-212	ENST00000483617	C22orf23	Q9BZE7	217 aa		13.65	□□□□□ -0.22
PTPN18-212	ENST00000483617	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN18-212	ENST00000483617	SALL1	Q9NSC2	1324 aa		13.64	□□□□□ -0.23
PTPN18-212	ENST00000483617	ZBTB22	O15209	634 aa		13.64	□□□□□ -0.23
PTPN18-212	ENST00000483617	ALDH1A1	P00352	501 aa		13.64	□□□□□ -0.23
PTPN18-212	ENST00000483617	PRDX5	P30044	214 aa		13.64	□□□□□ -0.23
PTPN18-212	ENST00000483617	ZAP70	P43403	619 aa		13.64	□□□□□ -0.23
PTPN18-212	ENST00000483617	INHBE	P58166	350 aa		13.64	□□□□□ -0.23
PTPN18-212	ENST00000483617	NOM1	Q5C9Z4	860 aa	Known RBP	13.64	□□□□□ -0.23
PTPN18-212	ENST00000483617	FKBP1C	Q5VVH2	108 aa		13.64	□□□□□ -0.23
PTPN18-212	ENST00000483617	FAM83A	Q86UY5	434 aa		13.64	□□□□□ -0.23
PTPN18-212	ENST00000483617	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN18-212	ENST00000483617	ANO2	Q9NQ90	1003 aa		13.64	□□□□□ -0.23
PTPN18-212	ENST00000483617	GPR25	O00155	361 aa		13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	RNF113A	O15541	343 aa	Known RBP	13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	SGSM2	O43147	1006 aa		13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	SEC24B	O95487	1268 aa		13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	LDHB	P07195	334 aa	Known RBP	13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	GJA5	P36382	358 aa		13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	DIXDC1	Q155Q3	683 aa		13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	IFNL1	Q8IU54	200 aa		13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	ZGPAT	Q8N5A5	531 aa	Known RBP	13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	OPTN	Q96CV9	577 aa		13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	EDC3	Q96F86	508 aa	Known RBP	13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	ELP3	Q9H9T3	547 aa		13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	HMG20B	Q9P0W2	317 aa		13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	LRP2BP	Q9P2M1	347 aa		13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	DAGLA	Q9Y4D2	1042 aa		13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	PDS5A	Q29RF7	1337 aa	Known RBP	13.63	□□□□□ -0.23
PTPN18-212	ENST00000483617	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	IGSF3	O75054	1194 aa		13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	IDH1	O75874	414 aa	Known RBP	13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	NMI	Q13287	307 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	RASGRF1	Q13972	1273 aa		13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	VGLL4	Q14135	290 aa		13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	TMED8	Q6PL24	325 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	HOOK2	Q96ED9	719 aa		13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	DDRGK1	Q96HY6	314 aa		13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	TBC1D32	Q96NH3	1257 aa		13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	HELLS	Q9NRZ9	838 aa		13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	CSAD	Q9Y600	493 aa		13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	NDUFB9	Q9Y6M9	179 aa		13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	MYH7	P12883	1935 aa		13.62	□□□□□ -0.23
PTPN18-212	ENST00000483617	CYP2E1	P05181	493 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN18-212	ENST00000483617	MAP3K9	P80192	1104 aa		13.61	□□□□□ -0.23
PTPN18-212	ENST00000483617	MCMDC2	Q4G0Z9	681 aa		13.61	□□□□□ -0.23
PTPN18-212	ENST00000483617	R3HDML	Q9H3Y0	253 aa		13.61	□□□□□ -0.23
PTPN18-212	ENST00000483617	DAXX	Q9UER7	740 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN18-212	ENST00000483617	TESPA1	A2RU30	521 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN18-212	ENST00000483617	FKTN	O75072	461 aa		13.6	□□□□□ -0.23
PTPN18-212	ENST00000483617	PKN2	Q16513	984 aa	Known RBP	13.6	□□□□□ -0.23
PTPN18-212	ENST00000483617	SLC9C2	Q5TAH2	1124 aa		13.6	□□□□□ -0.23
PTPN18-212	ENST00000483617	DCAF15	Q66K64	600 aa		13.6	□□□□□ -0.23
PTPN18-212	ENST00000483617	OTUD7B	Q6GQQ9	843 aa		13.6	□□□□□ -0.23
PTPN18-212	ENST00000483617	CDC42EP5	Q6NZY7	148 aa		13.6	□□□□□ -0.23
PTPN18-212	ENST00000483617	CNKSR2	Q8WXI2	1034 aa		13.6	□□□□□ -0.23
PTPN18-212	ENST00000483617	WRNIP1	Q96S55	665 aa		13.6	□□□□□ -0.23
PTPN18-212	ENST00000483617	USP26	Q9BXU7	913 aa		13.6	□□□□□ -0.23
PTPN18-212	ENST00000483617	ABCF2	Q9UG63	623 aa		13.6	□□□□□ -0.23
PTPN18-212	ENST00000483617	NFIA	Q12857	509 aa		13.59	□□□□□ -0.23
PTPN18-212	ENST00000483617	RNF20	Q5VTR2	975 aa		13.59	□□□□□ -0.23
PTPN18-212	ENST00000483617	PI16	Q6UXB8	463 aa		13.59	□□□□□ -0.23
PTPN18-212	ENST00000483617	ERICH6	Q7L0X2	663 aa		13.59	□□□□□ -0.23
PTPN18-212	ENST00000483617	DZIP1	Q86YF9	867 aa	Known RBP	13.59	□□□□□ -0.23
PTPN18-212	ENST00000483617	FAM151A	Q8WW52	585 aa		13.59	□□□□□ -0.23
PTPN18-212	ENST00000483617	APPBP2	Q92624	585 aa		13.59	□□□□□ -0.23
PTPN18-212	ENST00000483617	ANTXR1	Q9H6X2	564 aa		13.59	□□□□□ -0.23
PTPN18-212	ENST00000483617	RAI14	Q9P0K7	980 aa		13.59	□□□□□ -0.23
PTPN18-212	ENST00000483617	SNCAIP	Q9Y6H5	919 aa		13.59	□□□□□ -0.23
PTPN18-212	ENST00000483617	GAK	O14976	1311 aa		13.59	□□□□□ -0.23
PTPN18-212	ENST00000483617		A0A0D9SFI3	127 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms