RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 MIGA1Q8NAN2 632 aa16.26■□□□□ 0.19
SSR1-208ENST00000483409 PLCG2P16885 1265 aa16.25■□□□□ 0.19
SSR1-208ENST00000483409 PPP4CP60510 307 aa16.25■□□□□ 0.19
SSR1-208ENST00000483409 SLC9C2Q5TAH2 1124 aa16.25■□□□□ 0.19
SSR1-208ENST00000483409 DCAF15Q66K64 600 aa16.25■□□□□ 0.19
SSR1-208ENST00000483409 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
SSR1-208ENST00000483409 HOOK2Q96ED9 719 aa16.25■□□□□ 0.19
SSR1-208ENST00000483409 NAV1Q8NEY1 1877 aa16.25■□□□□ 0.19
SSR1-208ENST00000483409 SIPA1L1O43166 1804 aa16.24■□□□□ 0.19
SSR1-208ENST00000483409 ZNF532Q9HCE3 1301 aa16.24■□□□□ 0.19
SSR1-208ENST00000483409 LAMB1P07942 1786 aa16.24■□□□□ 0.19
SSR1-208ENST00000483409 DDTLA6NHG4 134 aaPredicted RBP16.24■□□□□ 0.19
SSR1-208ENST00000483409 MAP4K4O95819 1239 aaPredicted RBP16.24■□□□□ 0.19
SSR1-208ENST00000483409 MX1P20591 662 aa16.24■□□□□ 0.19
SSR1-208ENST00000483409 MAP2K1Q02750 393 aaPredicted RBP16.24■□□□□ 0.19
SSR1-208ENST00000483409 SH3BP5LQ7L8J4 393 aa16.24■□□□□ 0.19
SSR1-208ENST00000483409 SMC5Q8IY18 1101 aa16.24■□□□□ 0.19
SSR1-208ENST00000483409 ANKRD13AQ8IZ07 590 aa16.24■□□□□ 0.19
SSR1-208ENST00000483409 SLC10A4Q96EP9 437 aa16.24■□□□□ 0.19
SSR1-208ENST00000483409 WRNIP1Q96S55 665 aa16.24■□□□□ 0.19
SSR1-208ENST00000483409 CSRNP1Q96S65 589 aa16.24■□□□□ 0.19
SSR1-208ENST00000483409 LNPKQ9C0E8 428 aa16.24■□□□□ 0.19
SSR1-208ENST00000483409 TTC41PQ6P2S7 1318 aa16.23■□□□□ 0.19
SSR1-208ENST00000483409 NPM3O75607 178 aaKnown RBP16.23■□□□□ 0.19
SSR1-208ENST00000483409 MAP3K9P80192 1104 aa16.23■□□□□ 0.19
SSR1-208ENST00000483409 KIF23Q02241 960 aaPredicted RBP16.23■□□□□ 0.19
SSR1-208ENST00000483409 SLFNL1Q499Z3 407 aa16.23■□□□□ 0.19
SSR1-208ENST00000483409 MAPKAPK5Q8IW41 473 aa16.23■□□□□ 0.19
SSR1-208ENST00000483409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.23■□□□□ 0.19
SSR1-208ENST00000483409 TGFBRAP1Q8WUH2 860 aa16.23■□□□□ 0.19
SSR1-208ENST00000483409 AIDAQ96BJ3 306 aa16.23■□□□□ 0.19
SSR1-208ENST00000483409 ZNF341Q9BYN7 854 aa16.23■□□□□ 0.19
SSR1-208ENST00000483409 OSBPL5Q9H0X9 879 aaPredicted RBP16.23■□□□□ 0.19
SSR1-208ENST00000483409 ELP3Q9H9T3 547 aa16.23■□□□□ 0.19
SSR1-208ENST00000483409 WBP1LQ9NX94 342 aa16.23■□□□□ 0.19
SSR1-208ENST00000483409 ATRNL1Q5VV63 1379 aa16.23■□□□□ 0.19
SSR1-208ENST00000483409 FLT1P17948 1338 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 SALL3Q9BXA9 1300 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 ATAD5Q96QE3 1844 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 TCRBV5S4A2TA0A5A2 114 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 ERC2O15083 957 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 CHGBP05060 677 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 SLURP2P0DP57 97 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 ADD2P35612 726 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 VGLL4Q14135 290 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 TMED8Q6PL24 325 aaPredicted RBP16.22■□□□□ 0.19
SSR1-208ENST00000483409 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.22■□□□□ 0.19
SSR1-208ENST00000483409 PI4K2BQ8TCG2 481 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 WNK4Q96J92 1243 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.22■□□□□ 0.19
SSR1-208ENST00000483409 CSADQ9Y600 493 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 DOCK1Q14185 1865 aa16.22■□□□□ 0.19
SSR1-208ENST00000483409 COL2A1P02458 1487 aaPredicted RBP16.22■□□□□ 0.19
SSR1-208ENST00000483409 BAZ2AQ9UIF9 1905 aaKnown RBP16.21■□□□□ 0.19
SSR1-208ENST00000483409 MAGEB6P1A0A0J9YX57 407 aa16.21■□□□□ 0.19
SSR1-208ENST00000483409 UNCXA6NJT0 531 aa16.21■□□□□ 0.19
SSR1-208ENST00000483409 FOXN1O15353 648 aa16.21■□□□□ 0.19
SSR1-208ENST00000483409 GLRX3O76003 335 aaKnown RBP16.21■□□□□ 0.19
SSR1-208ENST00000483409 SPRYD7Q5W111 196 aa16.21■□□□□ 0.19
SSR1-208ENST00000483409 ZKSCAN4Q969J2 545 aaPredicted RBP16.21■□□□□ 0.19
SSR1-208ENST00000483409 RIOK1Q9BRS2 568 aaKnown RBP16.21■□□□□ 0.19
SSR1-208ENST00000483409 DDX60LQ5H9U9 1706 aaKnown RBP16.21■□□□□ 0.19
SSR1-208ENST00000483409 INPP5BP32019 993 aa16.2■□□□□ 0.18
SSR1-208ENST00000483409 GJA5P36382 358 aa16.2■□□□□ 0.18
SSR1-208ENST00000483409 USP5P45974 858 aa16.2■□□□□ 0.18
SSR1-208ENST00000483409 NUCB1Q02818 461 aa16.2■□□□□ 0.18
SSR1-208ENST00000483409 CHD1LQ86WJ1 897 aa16.2■□□□□ 0.18
SSR1-208ENST00000483409 CERS3Q8IU89 383 aa16.2■□□□□ 0.18
SSR1-208ENST00000483409 KBTBD3Q8NAB2 608 aa16.2■□□□□ 0.18
SSR1-208ENST00000483409 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
SSR1-208ENST00000483409 OPTNQ96CV9 577 aa16.2■□□□□ 0.18
SSR1-208ENST00000483409 BEGAINQ9BUH8 593 aa16.2■□□□□ 0.18
SSR1-208ENST00000483409 SAP30BPQ9UHR5 308 aaKnown RBP16.2■□□□□ 0.18
SSR1-208ENST00000483409 FAM196BA6NMK8 535 aa16.19■□□□□ 0.18
SSR1-208ENST00000483409 PDE1AP54750 535 aa16.19■□□□□ 0.18
SSR1-208ENST00000483409 SLC4A8Q2Y0W8 1093 aa16.19■□□□□ 0.18
SSR1-208ENST00000483409 LCORLQ8N3X6 602 aa16.19■□□□□ 0.18
SSR1-208ENST00000483409 SNCAIPQ9Y6H5 919 aa16.19■□□□□ 0.18
SSR1-208ENST00000483409 MBD4O95243 580 aa16.18■□□□□ 0.18
SSR1-208ENST00000483409 ZBTB48P10074 688 aaPredicted RBP16.18■□□□□ 0.18
SSR1-208ENST00000483409 UBE3CQ15386 1083 aa16.18■□□□□ 0.18
SSR1-208ENST00000483409 ZSCAN25Q6NSZ9 544 aa16.18■□□□□ 0.18
SSR1-208ENST00000483409 OTUD5Q96G74 571 aa16.18■□□□□ 0.18
SSR1-208ENST00000483409 ARMT1Q9H993 441 aa16.18■□□□□ 0.18
SSR1-208ENST00000483409 STAP2Q9UGK3 403 aa16.18■□□□□ 0.18
SSR1-208ENST00000483409 TSKSQ9UJT2 592 aa16.18■□□□□ 0.18
SSR1-208ENST00000483409 ZNF112Q9UJU3 913 aa16.18■□□□□ 0.18
SSR1-208ENST00000483409 PALD1Q9ULE6 856 aa16.18■□□□□ 0.18
SSR1-208ENST00000483409 PHIPQ8WWQ0 1821 aa16.17■□□□□ 0.18
SSR1-208ENST00000483409 PHF20L1A8MW92 1017 aa16.17■□□□□ 0.18
SSR1-208ENST00000483409 CRNKL1Q9BZJ0 848 aaKnown RBP16.17■□□□□ 0.18
SSR1-208ENST00000483409 DHX36Q9H2U1 1008 aaKnown RBP16.17■□□□□ 0.18
SSR1-208ENST00000483409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.17■□□□□ 0.18
SSR1-208ENST00000483409 MYH8P13535 1937 aa16.17■□□□□ 0.18
SSR1-208ENST00000483409 SPDYE5A6NIY4 337 aa16.16■□□□□ 0.18
SSR1-208ENST00000483409 CTCFP49711 727 aaPredicted RBP16.16■□□□□ 0.18
SSR1-208ENST00000483409 MAP3K10Q02779 954 aa16.16■□□□□ 0.18
SSR1-208ENST00000483409 SREBF2Q12772 1141 aa16.16■□□□□ 0.18
SSR1-208ENST00000483409 REM2Q8IYK8 340 aaPredicted RBP16.16■□□□□ 0.18
SSR1-208ENST00000483409 SDR42E1Q8WUS8 393 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms