RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 CDCA5Q96FF9 252 aa21.43■■□□□ 1.02
CPNE1-224ENST00000483359 STRBPQ96SI9 672 aaKnown RBP21.43■■□□□ 1.02
CPNE1-224ENST00000483359 HELLSQ9NRZ9 838 aa21.43■■□□□ 1.02
CPNE1-224ENST00000483359 SLC4A4Q9Y6R1 1079 aa21.43■■□□□ 1.02
CPNE1-224ENST00000483359 ITGBL1O95965 494 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-224ENST00000483359 CHMLP26374 656 aa21.42■■□□□ 1.02
CPNE1-224ENST00000483359 MCMDC2Q4G0Z9 681 aa21.42■■□□□ 1.02
CPNE1-224ENST00000483359 FKBP1CQ5VVH2 108 aa21.42■■□□□ 1.02
CPNE1-224ENST00000483359 ZSCAN29Q8IWY8 852 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-224ENST00000483359 IL25Q9H293 177 aa21.42■■□□□ 1.02
CPNE1-224ENST00000483359 SAP30BPQ9UHR5 308 aaKnown RBP21.42■■□□□ 1.02
CPNE1-224ENST00000483359 NAV1Q8NEY1 1877 aa21.42■■□□□ 1.02
CPNE1-224ENST00000483359 FAM83AQ86UY5 434 aa21.41■■□□□ 1.02
CPNE1-224ENST00000483359 OSBPL5Q9H0X9 879 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-224ENST00000483359 FAM151AQ8WW52 585 aa21.41■■□□□ 1.02
CPNE1-224ENST00000483359 NBPF12Q5TAG4 269 aaPredicted RBP21.4■■□□□ 1.02
CPNE1-224ENST00000483359 TICAM2Q86XR7 235 aa21.4■■□□□ 1.02
CPNE1-224ENST00000483359 ENTPD3O75355 529 aa21.39■■□□□ 1.02
CPNE1-224ENST00000483359 APPP05067 770 aa21.39■■□□□ 1.02
CPNE1-224ENST00000483359 VPS53Q5VIR6 699 aa21.39■■□□□ 1.02
CPNE1-224ENST00000483359 TEPSINQ96N21 525 aa21.39■■□□□ 1.02
CPNE1-224ENST00000483359 FZD1Q9UP38 647 aa21.39■■□□□ 1.02
CPNE1-224ENST00000483359 PPP2R3BQ9Y5P8 575 aa21.39■■□□□ 1.02
CPNE1-224ENST00000483359 CCDC171Q6TFL3 1326 aa21.39■■□□□ 1.01
CPNE1-224ENST00000483359 DDTLA6NHG4 134 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-224ENST00000483359 FSTL1Q12841 308 aa21.39■■□□□ 1.01
CPNE1-224ENST00000483359 PRKG1Q13976 671 aa21.39■■□□□ 1.01
CPNE1-224ENST00000483359 SH3BP5LQ7L8J4 393 aa21.39■■□□□ 1.01
CPNE1-224ENST00000483359 DCP1AQ9NPI6 582 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-224ENST00000483359 PALD1Q9ULE6 856 aa21.39■■□□□ 1.01
CPNE1-224ENST00000483359 DDX60LQ5H9U9 1706 aaKnown RBP21.39■■□□□ 1.01
CPNE1-224ENST00000483359 SSC5DA1L4H1 1573 aa21.39■■□□□ 1.01
CPNE1-224ENST00000483359 BAZ2AQ9UIF9 1905 aaKnown RBP21.38■■□□□ 1.01
CPNE1-224ENST00000483359 CSRNP1Q96S65 589 aa21.38■■□□□ 1.01
CPNE1-224ENST00000483359 MCM9Q9NXL9 1143 aa21.38■■□□□ 1.01
CPNE1-224ENST00000483359 MYH1P12882 1939 aa21.38■■□□□ 1.01
CPNE1-224ENST00000483359 PASKQ96RG2 1323 aa21.38■■□□□ 1.01
CPNE1-224ENST00000483359 CDC45O75419 566 aa21.37■■□□□ 1.01
CPNE1-224ENST00000483359 CELF2O95319 508 aaKnown RBP21.37■■□□□ 1.01
CPNE1-224ENST00000483359 EPB41L4AQ9HCS5 686 aaPredicted RBP21.37■■□□□ 1.01
CPNE1-224ENST00000483359 SLURP2P0DP57 97 aa21.37■■□□□ 1.01
CPNE1-224ENST00000483359 GNAT2P19087 354 aa21.37■■□□□ 1.01
CPNE1-224ENST00000483359 RPAP1Q9BWH6 1393 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-224ENST00000483359 GSG1L2A8MUP6 293 aa21.36■■□□□ 1.01
CPNE1-224ENST00000483359 MKRN1Q9UHC7 482 aaKnown RBP21.36■■□□□ 1.01
CPNE1-224ENST00000483359 FOXP2O15409 715 aa21.36■■□□□ 1.01
CPNE1-224ENST00000483359 NPM3O75607 178 aaKnown RBP21.36■■□□□ 1.01
CPNE1-224ENST00000483359 EVX2Q03828 476 aa21.36■■□□□ 1.01
CPNE1-224ENST00000483359 MIGA2Q7L4E1 593 aa21.36■■□□□ 1.01
CPNE1-224ENST00000483359 RUFY2Q8WXA3 655 aa21.36■■□□□ 1.01
CPNE1-224ENST00000483359 DDRGK1Q96HY6 314 aa21.36■■□□□ 1.01
CPNE1-224ENST00000483359 ATP8A2Q9NTI2 1148 aa21.36■■□□□ 1.01
CPNE1-224ENST00000483359 NF2P35240 595 aa21.35■■□□□ 1.01
CPNE1-224ENST00000483359 TDO2P48775 406 aa21.35■■□□□ 1.01
CPNE1-224ENST00000483359 CASC1Q6TDU7 716 aa21.35■■□□□ 1.01
CPNE1-224ENST00000483359 ATRNL1Q5VV63 1379 aa21.35■■□□□ 1.01
CPNE1-224ENST00000483359 RAD50Q92878 1312 aa21.34■■□□□ 1.01
CPNE1-224ENST00000483359 TRPM7Q96QT4 1865 aa21.34■■□□□ 1.01
CPNE1-224ENST00000483359 CYP2D7A0A087X1C5 515 aa21.34■■□□□ 1.01
CPNE1-224ENST00000483359 FAM196BA6NMK8 535 aa21.34■■□□□ 1.01
CPNE1-224ENST00000483359 PATL2C9JE40 543 aaKnown RBP21.34■■□□□ 1.01
CPNE1-224ENST00000483359 POLR3DP05423 398 aaPredicted RBP21.34■■□□□ 1.01
CPNE1-224ENST00000483359 CYP2D6P10635 497 aa21.34■■□□□ 1.01
CPNE1-224ENST00000483359 TTLL12Q14166 644 aaPredicted RBP21.34■■□□□ 1.01
CPNE1-224ENST00000483359 SUPT20HL1Q3ZLR7 823 aa21.34■■□□□ 1.01
CPNE1-224ENST00000483359 IFNL3Q8IZI9 196 aa21.34■■□□□ 1.01
CPNE1-224ENST00000483359 SIPA1L1O43166 1804 aa21.34■■□□□ 1.01
CPNE1-224ENST00000483359 SGSM2O43147 1006 aa21.34■■□□□ 1.01
CPNE1-224ENST00000483359 HSPD1P10809 573 aaKnown RBP21.34■■□□□ 1.01
CPNE1-224ENST00000483359 MFAP1P55081 439 aaKnown RBP21.34■■□□□ 1.01
CPNE1-224ENST00000483359 CST9Q5W186 159 aa21.34■■□□□ 1.01
CPNE1-224ENST00000483359 MOB2Q70IA6 237 aa21.34■■□□□ 1.01
CPNE1-224ENST00000483359 COL2A1P02458 1487 aaPredicted RBP21.33■■□□□ 1.01
CPNE1-224ENST00000483359 SMIM22K7EJ46 135 aa21.33■■□□□ 1.01
CPNE1-224ENST00000483359 ESYT1Q9BSJ8 1104 aa21.33■■□□□ 1.01
CPNE1-224ENST00000483359 NAPBQ9H115 298 aa21.33■■□□□ 1.01
CPNE1-224ENST00000483359 DHX36Q9H2U1 1008 aaKnown RBP21.33■■□□□ 1.01
CPNE1-224ENST00000483359 USP17L12C9JPN9 530 aa21.32■■□□□ 1
CPNE1-224ENST00000483359 USP17L21D6R901 530 aa21.32■■□□□ 1
CPNE1-224ENST00000483359 HLA-DOAP06340 250 aa21.32■■□□□ 1
CPNE1-224ENST00000483359 PLCD1P51178 756 aa21.32■■□□□ 1
CPNE1-224ENST00000483359 NACAP1Q9BZK3 213 aa21.32■■□□□ 1
CPNE1-224ENST00000483359 CTR9Q6PD62 1173 aa21.32■■□□□ 1
CPNE1-224ENST00000483359 STK11IPQ8N1F8 1099 aa21.32■■□□□ 1
CPNE1-224ENST00000483359 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.32■■□□□ 1
CPNE1-224ENST00000483359 GBA2Q9HCG7 927 aaPredicted RBP21.31■■□□□ 1
CPNE1-224ENST00000483359 LAMB1P07942 1786 aa21.31■■□□□ 1
CPNE1-224ENST00000483359 MINDY4BA8MYZ0 360 aa21.3■■□□□ 1
CPNE1-224ENST00000483359 AMOTL1Q8IY63 956 aa21.3■■□□□ 1
CPNE1-224ENST00000483359 CRACR2BQ8N4Y2 399 aaPredicted RBP21.3■■□□□ 1
CPNE1-224ENST00000483359 PI4KBQ9UBF8 816 aa21.3■■□□□ 1
CPNE1-224ENST00000483359 ARPP21Q9UBL0 812 aaPredicted RBP21.3■■□□□ 1
CPNE1-224ENST00000483359 ANGEL1Q9UNK9 670 aaKnown RBP21.3■■□□□ 1
CPNE1-224ENST00000483359 C1QTNF8P60827 252 aa21.3■■□□□ 1
CPNE1-224ENST00000483359 TTC6Q86TZ1 520 aa21.3■■□□□ 1
CPNE1-224ENST00000483359 TRIM34Q9BYJ4 488 aa21.3■■□□□ 1
CPNE1-224ENST00000483359 PPP1R12BO60237 982 aaPredicted RBP21.29■■□□□ 1
CPNE1-224ENST00000483359 GIMAP6Q6P9H5 292 aa21.29■■□□□ 1
CPNE1-224ENST00000483359 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.29■■□□□ 19e-8■■■■■ 116.8
CPNE1-224ENST00000483359 ANO2Q9NQ90 1003 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms