RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
VARS-225ENST00000482996 PLCG2P16885 1265 aa16.94■□□□□ 0.3
VARS-225ENST00000482996 GTF2A2P52657 109 aa16.94■□□□□ 0.3
VARS-225ENST00000482996 ZKSCAN4Q969J2 545 aaPredicted RBP16.94■□□□□ 0.3
VARS-225ENST00000482996 OTUD5Q96G74 571 aa16.94■□□□□ 0.3
VARS-225ENST00000482996 SNCAIPQ9Y6H5 919 aa16.94■□□□□ 0.3
VARS-225ENST00000482996 RRP1P56182 461 aaKnown RBP16.93■□□□□ 0.3
VARS-225ENST00000482996 TEX11Q8IYF3 940 aa16.93■□□□□ 0.3
VARS-225ENST00000482996 CNKSR2Q8WXI2 1034 aa16.93■□□□□ 0.3
VARS-225ENST00000482996 CFHR5Q9BXR6 569 aa16.93■□□□□ 0.3
VARS-225ENST00000482996 BCL11AQ9H165 835 aa16.93■□□□□ 0.3
VARS-225ENST00000482996 DDX4Q9NQI0 724 aaKnown RBP16.93■□□□□ 0.3
VARS-225ENST00000482996 PIH1D3Q9NQM4 214 aaKnown RBP16.93■□□□□ 0.3
VARS-225ENST00000482996 ZNF112Q9UJU3 913 aa16.93■□□□□ 0.3
VARS-225ENST00000482996 TESPA1A2RU30 521 aaPredicted RBP16.92■□□□□ 0.3
VARS-225ENST00000482996 IDH1O75874 414 aaKnown RBP16.92■□□□□ 0.3
VARS-225ENST00000482996 INPP5BP32019 993 aa16.92■□□□□ 0.3
VARS-225ENST00000482996 DGKZQ13574 1117 aa16.92■□□□□ 0.3
VARS-225ENST00000482996 NOM1Q5C9Z4 860 aaKnown RBP16.92■□□□□ 0.3
VARS-225ENST00000482996 AATFQ9NY61 560 aaKnown RBP eCLIP16.92■□□□□ 0.3
VARS-225ENST00000482996 CCL15-CCL14A0A0B4J2E2 113 aa16.91■□□□□ 0.3
VARS-225ENST00000482996 GPR25O00155 361 aa16.91■□□□□ 0.3
VARS-225ENST00000482996 IGF2BP3O00425 579 aaKnown RBP eCLIP16.91■□□□□ 0.3
VARS-225ENST00000482996 CYP7A1P22680 504 aa16.91■□□□□ 0.3
VARS-225ENST00000482996 PPP4CP60510 307 aa16.91■□□□□ 0.3
VARS-225ENST00000482996 MAP3K12Q12852 859 aa16.91■□□□□ 0.3
VARS-225ENST00000482996 PPIL2Q13356 520 aa16.91■□□□□ 0.3
VARS-225ENST00000482996 CCL15Q16663 113 aa16.91■□□□□ 0.3
VARS-225ENST00000482996 TMED8Q6PL24 325 aaPredicted RBP16.91■□□□□ 0.3
VARS-225ENST00000482996 SH3BP5LQ7L8J4 393 aa16.91■□□□□ 0.3
VARS-225ENST00000482996 ABHD8Q96I13 439 aa16.91■□□□□ 0.3
VARS-225ENST00000482996 MS4A4AQ96JQ5 239 aa16.91■□□□□ 0.3
VARS-225ENST00000482996 MAST2Q6P0Q8 1798 aa16.9■□□□□ 0.3
VARS-225ENST00000482996 DDTLA6NHG4 134 aaPredicted RBP16.9■□□□□ 0.3
VARS-225ENST00000482996 CETPP11597 493 aa16.9■□□□□ 0.3
VARS-225ENST00000482996 PPATQ06203 517 aa16.9■□□□□ 0.3
VARS-225ENST00000482996 SNAPC2Q13487 334 aa16.9■□□□□ 0.3
VARS-225ENST00000482996 TTF1Q15361 905 aaPredicted RBP16.9■□□□□ 0.3
VARS-225ENST00000482996 NOL9Q5SY16 702 aaKnown RBP16.9■□□□□ 0.3
VARS-225ENST00000482996 CERS3Q8IU89 383 aa16.9■□□□□ 0.3
VARS-225ENST00000482996 SH3RF3Q8TEJ3 882 aaPredicted RBP16.9■□□□□ 0.3
VARS-225ENST00000482996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.9■□□□□ 0.3
VARS-225ENST00000482996 ZNF296Q8WUU4 475 aaPredicted RBP16.9■□□□□ 0.3
VARS-225ENST00000482996 LRRCC1Q9C099 1032 aa16.9■□□□□ 0.3
VARS-225ENST00000482996 MCOLN1Q9GZU1 580 aa16.9■□□□□ 0.3
VARS-225ENST00000482996 OSBPL5Q9H0X9 879 aaPredicted RBP16.9■□□□□ 0.3
VARS-225ENST00000482996 NDUFB9Q9Y6M9 179 aa16.9■□□□□ 0.3
VARS-225ENST00000482996 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.3
VARS-225ENST00000482996 FKTNO75072 461 aa16.89■□□□□ 0.29
VARS-225ENST00000482996 MAP3K10Q02779 954 aa16.89■□□□□ 0.29
VARS-225ENST00000482996 CTU1Q7Z7A3 348 aaKnown RBP16.89■□□□□ 0.29
VARS-225ENST00000482996 BRI3BPQ8WY22 251 aa16.89■□□□□ 0.29
VARS-225ENST00000482996 PTPN18Q99952 460 aa16.89■□□□□ 0.29
VARS-225ENST00000482996 PICK1Q9NRD5 415 aa16.89■□□□□ 0.29
VARS-225ENST00000482996 COL2A1P02458 1487 aaPredicted RBP16.88■□□□□ 0.29
VARS-225ENST00000482996 LAMB1P07942 1786 aa16.88■□□□□ 0.29
VARS-225ENST00000482996 IRF6O14896 467 aa16.88■□□□□ 0.29
VARS-225ENST00000482996 ADGRA1Q86SQ6 560 aa16.88■□□□□ 0.29
VARS-225ENST00000482996 MAGEB6Q8N7X4 407 aa16.88■□□□□ 0.29
VARS-225ENST00000482996 DNAJC2Q99543 621 aaKnown RBP16.88■□□□□ 0.29
VARS-225ENST00000482996 R3HDMLQ9H3Y0 253 aa16.88■□□□□ 0.29
VARS-225ENST00000482996 ANTXR1Q9H6X2 564 aa16.88■□□□□ 0.29
VARS-225ENST00000482996 DOCK2Q92608 1830 aa16.88■□□□□ 0.29
VARS-225ENST00000482996 PHF20L1A8MW92 1017 aa16.87■□□□□ 0.29
VARS-225ENST00000482996 TBC1D12O60347 775 aa16.87■□□□□ 0.29
VARS-225ENST00000482996 SCYL3Q8IZE3 742 aa16.87■□□□□ 0.29
VARS-225ENST00000482996 TGFBRAP1Q8WUH2 860 aa16.87■□□□□ 0.29
VARS-225ENST00000482996 DHX36Q9H2U1 1008 aaKnown RBP16.87■□□□□ 0.29
VARS-225ENST00000482996 DCTPP1Q9H773 170 aa16.87■□□□□ 0.29
VARS-225ENST00000482996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.87■□□□□ 0.29
VARS-225ENST00000482996 GOLIM4O00461 696 aa16.86■□□□□ 0.29
VARS-225ENST00000482996 CTNND1O60716 968 aaKnown RBP16.86■□□□□ 0.29
VARS-225ENST00000482996 CRHR2Q13324 411 aa16.86■□□□□ 0.29
VARS-225ENST00000482996 TAF1CQ15572 869 aaPredicted RBP16.86■□□□□ 0.29
VARS-225ENST00000482996 MAPKAPK5Q8IW41 473 aa16.86■□□□□ 0.29
VARS-225ENST00000482996 MIGA1Q8NAN2 632 aa16.86■□□□□ 0.29
VARS-225ENST00000482996 ZFYVE28Q9HCC9 887 aa16.86■□□□□ 0.29
VARS-225ENST00000482996 ZCCHC17Q9NP64 241 aaKnown RBP16.86■□□□□ 0.29
VARS-225ENST00000482996 MYO5AQ9Y4I1 1855 aaKnown RBP16.86■□□□□ 0.29
VARS-225ENST00000482996 SMARCA5O60264 1052 aaPredicted RBP16.85■□□□□ 0.29
VARS-225ENST00000482996 ATP5JP18859 108 aa16.85■□□□□ 0.29
VARS-225ENST00000482996 DYNLL1P63167 89 aaKnown RBP16.85■□□□□ 0.29
VARS-225ENST00000482996 PKN2Q16513 984 aaKnown RBP16.85■□□□□ 0.29
VARS-225ENST00000482996 BOLA2Q9H3K6 86 aa16.85■□□□□ 0.29
VARS-225ENST00000482996 PI4KBQ9UBF8 816 aa16.85■□□□□ 0.29
VARS-225ENST00000482996 HERC5Q9UII4 1024 aaKnown RBP16.85■□□□□ 0.29
VARS-225ENST00000482996 KCNH4Q9UQ05 1017 aa16.85■□□□□ 0.29
VARS-225ENST00000482996 FLT1P17948 1338 aa16.85■□□□□ 0.29
VARS-225ENST00000482996 BTBD19C9JJ37 291 aa16.84■□□□□ 0.29
VARS-225ENST00000482996 CXCL11O14625 94 aa16.84■□□□□ 0.29
VARS-225ENST00000482996 USP5P45974 858 aa16.84■□□□□ 0.29
VARS-225ENST00000482996 SLC9C2Q5TAH2 1124 aa16.84■□□□□ 0.29
VARS-225ENST00000482996 FAM43AQ8N2R8 423 aa16.84■□□□□ 0.29
VARS-225ENST00000482996 GPATCH3Q96I76 525 aa16.84■□□□□ 0.29
VARS-225ENST00000482996 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
VARS-225ENST00000482996 TRIM34Q9BYJ4 488 aa16.84■□□□□ 0.29
VARS-225ENST00000482996 PAG1Q9NWQ8 432 aa16.84■□□□□ 0.29
VARS-225ENST00000482996 ZHX2Q9Y6X8 837 aa16.84■□□□□ 0.29
VARS-225ENST00000482996 CCDC85CA6NKD9 419 aa16.83■□□□□ 0.28
VARS-225ENST00000482996 FAM196BA6NMK8 535 aa16.83■□□□□ 0.28
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