RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 DYNLL1P63167 89 aaKnown RBP25.3■■□□□ 1.64
SEC13-217ENST00000482647 DCAF15Q66K64 600 aa25.3■■□□□ 1.64
SEC13-217ENST00000482647 ZSCAN29Q8IWY8 852 aaPredicted RBP25.3■■□□□ 1.64
SEC13-217ENST00000482647 JMYQ8N9B5 988 aa25.3■■□□□ 1.64
SEC13-217ENST00000482647 PCNTO95613 3336 aa25.3■■□□□ 1.64
SEC13-217ENST00000482647 MAGEB6P1A0A0J9YX57 407 aa25.29■■□□□ 1.64
SEC13-217ENST00000482647 TCRBV5S4A2TA0A5A2 114 aa25.29■■□□□ 1.64
SEC13-217ENST00000482647 NEFLP07196 543 aa25.29■■□□□ 1.64
SEC13-217ENST00000482647 ADD2P35612 726 aa25.29■■□□□ 1.64
SEC13-217ENST00000482647 KBTBD3Q8NAB2 608 aa25.29■■□□□ 1.64
SEC13-217ENST00000482647 UBE3CQ15386 1083 aa25.28■■□□□ 1.64
SEC13-217ENST00000482647 TGFBRAP1Q8WUH2 860 aa25.28■■□□□ 1.64
SEC13-217ENST00000482647 CSRNP1Q96S65 589 aa25.28■■□□□ 1.64
SEC13-217ENST00000482647 MAST2Q6P0Q8 1798 aa25.28■■□□□ 1.64
SEC13-217ENST00000482647 MAP2K2P36507 400 aa25.27■■□□□ 1.64
SEC13-217ENST00000482647 LRRFIP1Q32MZ4 808 aaKnown RBP25.27■■□□□ 1.64
SEC13-217ENST00000482647 MIGA2Q7L4E1 593 aa25.27■■□□□ 1.64
SEC13-217ENST00000482647 OSBPL5Q9H0X9 879 aaPredicted RBP25.27■■□□□ 1.64
SEC13-217ENST00000482647 NOGQ13253 232 aa25.26■■□□□ 1.63
SEC13-217ENST00000482647 SH3BP5LQ7L8J4 393 aa25.26■■□□□ 1.63
SEC13-217ENST00000482647 ANKRD13AQ8IZ07 590 aa25.26■■□□□ 1.63
SEC13-217ENST00000482647 SLC10A4Q96EP9 437 aa25.26■■□□□ 1.63
SEC13-217ENST00000482647 RIOK1Q9BRS2 568 aaKnown RBP25.26■■□□□ 1.63
SEC13-217ENST00000482647 ZNF341Q9BYN7 854 aa25.26■■□□□ 1.63
SEC13-217ENST00000482647 DDTLA6NHG4 134 aaPredicted RBP25.25■■□□□ 1.63
SEC13-217ENST00000482647 FAM155AB1AL88 458 aaPredicted RBP25.25■■□□□ 1.63
SEC13-217ENST00000482647 SLC10A3P09131 477 aa25.25■■□□□ 1.63
SEC13-217ENST00000482647 USP5P45974 858 aa25.25■■□□□ 1.63
SEC13-217ENST00000482647 MAP3K9P80192 1104 aa25.25■■□□□ 1.63
SEC13-217ENST00000482647 MAPKAPK5Q8IW41 473 aa25.25■■□□□ 1.63
SEC13-217ENST00000482647 DHX36Q9H2U1 1008 aaKnown RBP25.25■■□□□ 1.63
SEC13-217ENST00000482647 FLT1P17948 1338 aa25.24■■□□□ 1.63
SEC13-217ENST00000482647 AOC2O75106 756 aa25.24■■□□□ 1.63
SEC13-217ENST00000482647 ZFYP08048 801 aaPredicted RBP25.24■■□□□ 1.63
SEC13-217ENST00000482647 RASAL3Q86YV0 1011 aa25.24■■□□□ 1.63
SEC13-217ENST00000482647 PLEKHM2Q8IWE5 1019 aa25.24■■□□□ 1.63
SEC13-217ENST00000482647 MYO5AQ9Y4I1 1855 aaKnown RBP25.23■■□□□ 1.63
SEC13-217ENST00000482647 DOCK2Q92608 1830 aa25.23■■□□□ 1.63
SEC13-217ENST00000482647 ATRNL1Q5VV63 1379 aa25.23■■□□□ 1.63
SEC13-217ENST00000482647 RNF113AO15541 343 aaKnown RBP25.23■■□□□ 1.63
SEC13-217ENST00000482647 SLFNL1Q499Z3 407 aa25.23■■□□□ 1.63
SEC13-217ENST00000482647 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.23■■□□□ 1.63
SEC13-217ENST00000482647 EVI5LQ96CN4 794 aa25.23■■□□□ 1.63
SEC13-217ENST00000482647 FSD1Q9BTV5 496 aa25.23■■□□□ 1.63
SEC13-217ENST00000482647 CRNKL1Q9BZJ0 848 aaKnown RBP25.23■■□□□ 1.63
SEC13-217ENST00000482647 OSBPL3Q9H4L5 887 aa25.23■■□□□ 1.63
SEC13-217ENST00000482647 CSADQ9Y600 493 aa25.23■■□□□ 1.63
SEC13-217ENST00000482647 CLMNQ96JQ2 1002 aa25.22■■□□□ 1.63
SEC13-217ENST00000482647 WRNIP1Q96S55 665 aa25.22■■□□□ 1.63
SEC13-217ENST00000482647 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.22■■□□□ 1.63
SEC13-217ENST00000482647 CHGBP05060 677 aa25.21■■□□□ 1.63
SEC13-217ENST00000482647 MAP2K1Q02750 393 aaPredicted RBP25.21■■□□□ 1.63
SEC13-217ENST00000482647 MAP3K10Q02779 954 aa25.21■■□□□ 1.63
SEC13-217ENST00000482647 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.21■■□□□ 1.63
SEC13-217ENST00000482647 LCORLQ8N3X6 602 aa25.21■■□□□ 1.63
SEC13-217ENST00000482647 PI4KBQ9UBF8 816 aa25.21■■□□□ 1.63
SEC13-217ENST00000482647 COL2A1P02458 1487 aaPredicted RBP25.21■■□□□ 1.63
SEC13-217ENST00000482647 TBC1D12O60347 775 aa25.2■■□□□ 1.62
SEC13-217ENST00000482647 MBD4O95243 580 aa25.2■■□□□ 1.62
SEC13-217ENST00000482647 VGLL4Q14135 290 aa25.2■■□□□ 1.62
SEC13-217ENST00000482647 AIDAQ96BJ3 306 aa25.2■■□□□ 1.62
SEC13-217ENST00000482647 ARMT1Q9H993 441 aa25.2■■□□□ 1.62
SEC13-217ENST00000482647 ZNF112Q9UJU3 913 aa25.2■■□□□ 1.62
SEC13-217ENST00000482647 KIF23Q02241 960 aaPredicted RBP25.19■■□□□ 1.62
SEC13-217ENST00000482647 APPBP2Q92624 585 aa25.19■■□□□ 1.62
SEC13-217ENST00000482647 ZKSCAN4Q969J2 545 aaPredicted RBP25.19■■□□□ 1.62
SEC13-217ENST00000482647 PUS7LQ9H0K6 701 aaKnown RBP25.19■■□□□ 1.62
SEC13-217ENST00000482647 ELP3Q9H9T3 547 aa25.19■■□□□ 1.62
SEC13-217ENST00000482647 SAP30BPQ9UHR5 308 aaKnown RBP25.19■■□□□ 1.62
SEC13-217ENST00000482647 PALD1Q9ULE6 856 aa25.19■■□□□ 1.62
SEC13-217ENST00000482647 TRIM6-TRIM34B2RNG4 842 aa25.18■■□□□ 1.62
SEC13-217ENST00000482647 SPRYD7Q5W111 196 aa25.18■■□□□ 1.62
SEC13-217ENST00000482647 TICAM2Q86XR7 235 aa25.18■■□□□ 1.62
SEC13-217ENST00000482647 FOXP4Q8IVH2 680 aaPredicted RBP25.18■■□□□ 1.62
SEC13-217ENST00000482647 REM2Q8IYK8 340 aaPredicted RBP25.18■■□□□ 1.62
SEC13-217ENST00000482647 HLA-DOAP06340 250 aa25.17■■□□□ 1.62
SEC13-217ENST00000482647 CENPQQ7L2Z9 268 aaPredicted RBP25.17■■□□□ 1.62
SEC13-217ENST00000482647 WNK4Q96J92 1243 aa25.17■■□□□ 1.62
SEC13-217ENST00000482647 ZIC5Q96T25 663 aa25.17■■□□□ 1.62
SEC13-217ENST00000482647 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.17■■□□□ 1.62
SEC13-217ENST00000482647 HERC5Q9UII4 1024 aaKnown RBP25.17■■□□□ 1.62
SEC13-217ENST00000482647 PHF20L1A8MW92 1017 aa25.16■■□□□ 1.62
SEC13-217ENST00000482647 ZBTB48P10074 688 aaPredicted RBP25.16■■□□□ 1.62
SEC13-217ENST00000482647 PDE4AP27815 886 aa25.16■■□□□ 1.62
SEC13-217ENST00000482647 MKRN3Q13064 507 aaKnown RBP25.16■■□□□ 1.62
SEC13-217ENST00000482647 INPP5BP32019 993 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 TTC6Q86TZ1 520 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 SDR42E1Q8WUS8 393 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 OSBP2Q969R2 916 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 OPTNQ96CV9 577 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 CCDC136Q96JN2 1154 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 BEGAINQ9BUH8 593 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 TRIM34Q9BYJ4 488 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 ATP8A2Q9NTI2 1148 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 WBP1LQ9NX94 342 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 SNCAIPQ9Y6H5 919 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 SLC4A4Q9Y6R1 1079 aa25.15■■□□□ 1.62
SEC13-217ENST00000482647 PRKAB2O43741 272 aa25.14■■□□□ 1.62
SEC13-217ENST00000482647 CRACR2BQ8N4Y2 399 aaPredicted RBP25.14■■□□□ 1.62
SEC13-217ENST00000482647 RILPL2Q969X0 211 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms