RNA–Protein interactions for RNA: ENST00000482420.1

TMEM139-208, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-208ENST00000482420 DDX4Q9NQI0 724 aaKnown RBP23.57■■□□□ 1.36
TMEM139-208ENST00000482420 PICK1Q9NRD5 415 aa23.57■■□□□ 1.36
TMEM139-208ENST00000482420 ZHX2Q9Y6X8 837 aa23.57■■□□□ 1.36
TMEM139-208ENST00000482420 DDTLA6NHG4 134 aaPredicted RBP23.56■■□□□ 1.36
TMEM139-208ENST00000482420 SLF2Q8IX21 1173 aa23.56■■□□□ 1.36
TMEM139-208ENST00000482420 NEUROD6Q96NK8 337 aa23.56■■□□□ 1.36
TMEM139-208ENST00000482420 PARK7Q99497 189 aaKnown RBP23.56■■□□□ 1.36
TMEM139-208ENST00000482420 AKAP2Q9Y2D5 859 aa23.56■■□□□ 1.36
TMEM139-208ENST00000482420 PTPRAP18433 802 aa23.55■■□□□ 1.36
TMEM139-208ENST00000482420 OSBPP22059 807 aa23.55■■□□□ 1.36
TMEM139-208ENST00000482420 MVPQ14764 893 aaKnown RBP23.55■■□□□ 1.36
TMEM139-208ENST00000482420 SPTY2D1Q68D10 685 aaPredicted RBP23.55■■□□□ 1.36
TMEM139-208ENST00000482420 GPAT2Q6NUI2 795 aa23.55■■□□□ 1.36
TMEM139-208ENST00000482420 ARHGAP45Q92619 1136 aa23.55■■□□□ 1.36
TMEM139-208ENST00000482420 SRRDQ9UH36 339 aa23.55■■□□□ 1.36
TMEM139-208ENST00000482420 TNNQ9UQP3 1299 aa23.55■■□□□ 1.36
TMEM139-208ENST00000482420 MROH7-TTC4A0A0A0MT08 1334 aa23.55■■□□□ 1.36
TMEM139-208ENST00000482420 PDS5AQ29RF7 1337 aaKnown RBP23.55■■□□□ 1.36
TMEM139-208ENST00000482420 PRMT2P55345 433 aa23.54■■□□□ 1.36
TMEM139-208ENST00000482420 MECOMQ03112 1051 aa23.54■■□□□ 1.36
TMEM139-208ENST00000482420 MTFR1Q15390 333 aa23.54■■□□□ 1.36
TMEM139-208ENST00000482420 PI16Q6UXB8 463 aa23.54■■□□□ 1.36
TMEM139-208ENST00000482420 ERICH6Q7L0X2 663 aa23.54■■□□□ 1.36
TMEM139-208ENST00000482420 RAET1EQ8TD07 263 aa23.54■■□□□ 1.36
TMEM139-208ENST00000482420 FRAT1Q92837 279 aaPredicted RBP23.54■■□□□ 1.36
TMEM139-208ENST00000482420 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.54■■□□□ 1.36
TMEM139-208ENST00000482420 CXCL11O14625 94 aa23.53■■□□□ 1.36
TMEM139-208ENST00000482420 TRIM27P14373 513 aa23.53■■□□□ 1.36
TMEM139-208ENST00000482420 MTX1Q13505 466 aa23.53■■□□□ 1.36
TMEM139-208ENST00000482420 HABP4Q5JVS0 413 aaKnown RBP23.53■■□□□ 1.36
TMEM139-208ENST00000482420 GADL1Q6ZQY3 521 aa23.53■■□□□ 1.36
TMEM139-208ENST00000482420 MYPNQ86TC9 1320 aa23.53■■□□□ 1.36
TMEM139-208ENST00000482420 A0A0G2JLL6 359 aaPredicted RBP23.52■■□□□ 1.36
TMEM139-208ENST00000482420 ZBTB22O15209 634 aa23.52■■□□□ 1.36
TMEM139-208ENST00000482420 HOXD10P28358 340 aa23.52■■□□□ 1.36
TMEM139-208ENST00000482420 GORABQ5T7V8 394 aa23.52■■□□□ 1.36
TMEM139-208ENST00000482420 TBC1D9Q6ZT07 1266 aa23.52■■□□□ 1.36
TMEM139-208ENST00000482420 PRRT2Q7Z6L0 340 aaPredicted RBP23.52■■□□□ 1.36
TMEM139-208ENST00000482420 CLUAP1Q96AJ1 413 aa23.52■■□□□ 1.36
TMEM139-208ENST00000482420 FAM163AQ96GL9 167 aaPredicted RBP23.52■■□□□ 1.36
TMEM139-208ENST00000482420 HMG20BQ9P0W2 317 aa23.52■■□□□ 1.36
TMEM139-208ENST00000482420 TRIM75PA6NK02 468 aa23.51■■□□□ 1.35
TMEM139-208ENST00000482420 CCER2I3L3R5 266 aa23.51■■□□□ 1.35
TMEM139-208ENST00000482420 FASTKD5Q7L8L6 764 aaKnown RBP23.51■■□□□ 1.35
TMEM139-208ENST00000482420 CCDC84Q86UT8 332 aaPredicted RBP23.51■■□□□ 1.35
TMEM139-208ENST00000482420 ZNF384Q8TF68 577 aa23.51■■□□□ 1.35
TMEM139-208ENST00000482420 AFG3L2Q9Y4W6 797 aa23.51■■□□□ 1.35
TMEM139-208ENST00000482420 DOCK1Q14185 1865 aa23.51■■□□□ 1.35
TMEM139-208ENST00000482420 GPR75-ASB3A0A0A6YYF3 556 aa23.5■■□□□ 1.35
TMEM139-208ENST00000482420 FAM196BA6NMK8 535 aa23.5■■□□□ 1.35
TMEM139-208ENST00000482420 BCAR3O75815 825 aa23.5■■□□□ 1.35
TMEM139-208ENST00000482420 BCRP11274 1271 aa23.5■■□□□ 1.35
TMEM139-208ENST00000482420 GRK4P32298 578 aa23.5■■□□□ 1.35
TMEM139-208ENST00000482420 FCGRTP55899 365 aa23.5■■□□□ 1.35
TMEM139-208ENST00000482420 PRKCZQ05513 592 aa23.5■■□□□ 1.35
TMEM139-208ENST00000482420 SPATA5Q8NB90 893 aa23.5■■□□□ 1.35
TMEM139-208ENST00000482420 PNMA6EA0A0J9YXQ4 647 aa23.49■■□□□ 1.35
TMEM139-208ENST00000482420 IPO8O15397 1037 aaKnown RBP23.49■■□□□ 1.35
TMEM139-208ENST00000482420 CTNND1O60716 968 aaKnown RBP23.49■■□□□ 1.35
TMEM139-208ENST00000482420 GNAI2P04899 355 aa23.49■■□□□ 1.35
TMEM139-208ENST00000482420 RHBDL3P58872 404 aa23.49■■□□□ 1.35
TMEM139-208ENST00000482420 ATF7IPQ6VMQ6 1270 aa23.49■■□□□ 1.35
TMEM139-208ENST00000482420 RAI14Q9P0K7 980 aa23.49■■□□□ 1.35
TMEM139-208ENST00000482420 BIN2Q9UBW5 565 aaPredicted RBP23.49■■□□□ 1.35
TMEM139-208ENST00000482420 MAP3K10Q02779 954 aa23.48■■□□□ 1.35
TMEM139-208ENST00000482420 SHISA4Q96DD7 197 aa23.48■■□□□ 1.35
TMEM139-208ENST00000482420 G3BP1Q13283 466 aaKnown RBP eCLIP23.47■■□□□ 1.35
TMEM139-208ENST00000482420 SMCR8Q8TEV9 937 aaPredicted RBP23.47■■□□□ 1.35
TMEM139-208ENST00000482420 NSUN4Q96CB9 384 aaKnown RBP23.47■■□□□ 1.35
TMEM139-208ENST00000482420 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.47■■□□□ 1.35
TMEM139-208ENST00000482420 GABRQQ9UN88 632 aa23.47■■□□□ 1.35
TMEM139-208ENST00000482420 MGAMO43451 1857 aa23.46■■□□□ 1.35
TMEM139-208ENST00000482420 PTPRFP10586 1907 aa23.46■■□□□ 1.35
TMEM139-208ENST00000482420 ARID4AP29374 1257 aaPredicted RBP23.46■■□□□ 1.35
TMEM139-208ENST00000482420 MCAMP43121 646 aa23.46■■□□□ 1.35
TMEM139-208ENST00000482420 GSTO1P78417 241 aa23.46■■□□□ 1.35
TMEM139-208ENST00000482420 PHIPQ8WWQ0 1821 aa23.46■■□□□ 1.35
TMEM139-208ENST00000482420 CCL5P13501 91 aa23.45■■□□□ 1.34
TMEM139-208ENST00000482420 RNF208Q9H0X6 261 aa23.45■■□□□ 1.34
TMEM139-208ENST00000482420 LRP2BPQ9P2M1 347 aa23.45■■□□□ 1.34
TMEM139-208ENST00000482420 LDHCP07864 332 aa23.44■■□□□ 1.34
TMEM139-208ENST00000482420 OSBPL5Q9H0X9 879 aaPredicted RBP23.44■■□□□ 1.34
TMEM139-208ENST00000482420 COLQQ9Y215 455 aaPredicted RBP23.44■■□□□ 1.34
TMEM139-208ENST00000482420 SLC45A1Q9Y2W3 748 aa23.44■■□□□ 1.34
TMEM139-208ENST00000482420 H0YGN5 161 aa23.43■■□□□ 1.34
TMEM139-208ENST00000482420 UBXN2AP68543 259 aa23.43■■□□□ 1.34
TMEM139-208ENST00000482420 TREML2Q5T2D2 321 aa23.43■■□□□ 1.34
TMEM139-208ENST00000482420 TMEM57Q8N5G2 664 aa23.43■■□□□ 1.34
TMEM139-208ENST00000482420 SNRKQ9NRH2 765 aa23.43■■□□□ 1.34
TMEM139-208ENST00000482420 AGTPBP1Q9UPW5 1226 aa23.43■■□□□ 1.34
TMEM139-208ENST00000482420 TNPO2O14787 897 aaKnown RBP23.42■■□□□ 1.34
TMEM139-208ENST00000482420 TBC1D12O60347 775 aa23.42■■□□□ 1.34
TMEM139-208ENST00000482420 NPM3O75607 178 aaKnown RBP23.42■■□□□ 1.34
TMEM139-208ENST00000482420 FLT3LGP49771 235 aa23.42■■□□□ 1.34
TMEM139-208ENST00000482420 TEX11Q8IYF3 940 aa23.42■■□□□ 1.34
TMEM139-208ENST00000482420 ANKRD13CQ8N6S4 541 aa23.42■■□□□ 1.34
TMEM139-208ENST00000482420 SLAIN1Q8ND83 568 aa23.42■■□□□ 1.34
TMEM139-208ENST00000482420 NKX2-3Q8TAU0 364 aa23.42■■□□□ 1.34
TMEM139-208ENST00000482420 UQCRFS1P1P0C7P4 283 aa23.41■■□□□ 1.34
TMEM139-208ENST00000482420 GJA8P48165 433 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms