RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ATAD5Q96QE3 1844 aa15.89■□□□□ 0.13
HDAC1-208ENST00000482310 WDHD1O75717 1129 aaPredicted RBP15.88■□□□□ 0.13
HDAC1-208ENST00000482310 APPP05067 770 aa15.88■□□□□ 0.13
HDAC1-208ENST00000482310 PPP4CP60510 307 aa15.88■□□□□ 0.13
HDAC1-208ENST00000482310 APOBEC3FQ8IUX4 373 aaKnown RBP15.88■□□□□ 0.13
HDAC1-208ENST00000482310 SULF1Q8IWU6 871 aa15.88■□□□□ 0.13
HDAC1-208ENST00000482310 ZFPM1Q8IX07 1006 aa15.88■□□□□ 0.13
HDAC1-208ENST00000482310 SMC1BQ8NDV3 1235 aa15.88■□□□□ 0.13
HDAC1-208ENST00000482310 TMEM39BQ9GZU3 492 aa15.88■□□□□ 0.13
HDAC1-208ENST00000482310 HELLSQ9NRZ9 838 aa15.88■□□□□ 0.13
HDAC1-208ENST00000482310 FAM198AQ9UFP1 575 aa15.88■□□□□ 0.13
HDAC1-208ENST00000482310 CCDC171Q6TFL3 1326 aa15.88■□□□□ 0.13
HDAC1-208ENST00000482310 CNTNAP1P78357 1384 aa15.87■□□□□ 0.13
HDAC1-208ENST00000482310 OTOFQ9HC10 1997 aa15.87■□□□□ 0.13
HDAC1-208ENST00000482310 TRAF5O00463 557 aa15.87■□□□□ 0.13
HDAC1-208ENST00000482310 IGSF3O75054 1194 aa15.87■□□□□ 0.13
HDAC1-208ENST00000482310 FMR1Q06787 632 aaKnown RBP eCLIP15.87■□□□□ 0.136e-7■□□□□ 9.4
HDAC1-208ENST00000482310 RASA3Q14644 834 aa15.87■□□□□ 0.13
HDAC1-208ENST00000482310 VPS53Q5VIR6 699 aa15.87■□□□□ 0.13
HDAC1-208ENST00000482310 TMED8Q6PL24 325 aaPredicted RBP15.87■□□□□ 0.13
HDAC1-208ENST00000482310 CASC1Q6TDU7 716 aa15.87■□□□□ 0.13
HDAC1-208ENST00000482310 ZSCAN29Q8IWY8 852 aaPredicted RBP15.87■□□□□ 0.13
HDAC1-208ENST00000482310 CDAN1Q8IWY9 1227 aa15.87■□□□□ 0.13
HDAC1-208ENST00000482310 RUFY2Q8WXA3 655 aa15.87■□□□□ 0.13
HDAC1-208ENST00000482310 STRBPQ96SI9 672 aaKnown RBP15.87■□□□□ 0.13
HDAC1-208ENST00000482310 FLT1P17948 1338 aa15.87■□□□□ 0.13
HDAC1-208ENST00000482310 TNNI2P48788 182 aa15.86■□□□□ 0.13
HDAC1-208ENST00000482310 CHADLQ6NUI6 762 aa15.86■□□□□ 0.13
HDAC1-208ENST00000482310 DEFB129Q9H1M3 183 aa15.86■□□□□ 0.13
HDAC1-208ENST00000482310 ZNF408Q9H9D4 720 aa15.86■□□□□ 0.13
HDAC1-208ENST00000482310 PITPNM2Q9BZ72 1349 aa15.86■□□□□ 0.13
HDAC1-208ENST00000482310 TDO2P48775 406 aa15.85■□□□□ 0.13
HDAC1-208ENST00000482310 TNFAIP1Q13829 316 aa15.85■□□□□ 0.13
HDAC1-208ENST00000482310 CERS3Q8IU89 383 aa15.85■□□□□ 0.13
HDAC1-208ENST00000482310 STK11IPQ8N1F8 1099 aa15.85■□□□□ 0.13
HDAC1-208ENST00000482310 ZC3H15Q8WU90 426 aaKnown RBP15.85■□□□□ 0.13
HDAC1-208ENST00000482310 ESYT1Q9BSJ8 1104 aa15.85■□□□□ 0.13
HDAC1-208ENST00000482310 OSBPL5Q9H0X9 879 aaPredicted RBP15.85■□□□□ 0.13
HDAC1-208ENST00000482310 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.85■□□□□ 0.13
HDAC1-208ENST00000482310 CYP2D7A0A087X1C5 515 aa15.84■□□□□ 0.13
HDAC1-208ENST00000482310 SLURP2P0DP57 97 aa15.84■□□□□ 0.13
HDAC1-208ENST00000482310 CYP2D6P10635 497 aa15.84■□□□□ 0.13
HDAC1-208ENST00000482310 EVX2Q03828 476 aa15.84■□□□□ 0.13
HDAC1-208ENST00000482310 PRKG1Q13976 671 aa15.84■□□□□ 0.13
HDAC1-208ENST00000482310 IDI2Q9BXS1 227 aa15.84■□□□□ 0.13
HDAC1-208ENST00000482310 EPB41L4AQ9HCS5 686 aaPredicted RBP15.84■□□□□ 0.13
HDAC1-208ENST00000482310 DCP1AQ9NPI6 582 aaPredicted RBP15.84■□□□□ 0.13
HDAC1-208ENST00000482310 MCM9Q9NXL9 1143 aa15.84■□□□□ 0.13
HDAC1-208ENST00000482310 PGAP2Q9UHJ9 254 aa15.84■□□□□ 0.13
HDAC1-208ENST00000482310 PALD1Q9ULE6 856 aa15.84■□□□□ 0.13
HDAC1-208ENST00000482310 FZD1Q9UP38 647 aa15.84■□□□□ 0.13
HDAC1-208ENST00000482310 RAD50Q92878 1312 aa15.84■□□□□ 0.13
HDAC1-208ENST00000482310 DDTLA6NHG4 134 aaPredicted RBP15.83■□□□□ 0.12
HDAC1-208ENST00000482310 GSG1L2A8MUP6 293 aa15.83■□□□□ 0.12
HDAC1-208ENST00000482310 SGSM2O43147 1006 aa15.83■□□□□ 0.12
HDAC1-208ENST00000482310 POLR3DP05423 398 aaPredicted RBP15.83■□□□□ 0.12
HDAC1-208ENST00000482310 GNAT2P19087 354 aa15.83■□□□□ 0.12
HDAC1-208ENST00000482310 MFAP1P55081 439 aaKnown RBP15.83■□□□□ 0.12
HDAC1-208ENST00000482310 CDC37L1Q7L3B6 337 aa15.83■□□□□ 0.12
HDAC1-208ENST00000482310 CDCA5Q96FF9 252 aa15.83■□□□□ 0.12
HDAC1-208ENST00000482310 DDRGK1Q96HY6 314 aa15.83■□□□□ 0.12
HDAC1-208ENST00000482310 ANO2Q9NQ90 1003 aa15.83■□□□□ 0.12
HDAC1-208ENST00000482310 FAM196BA6NMK8 535 aa15.82■□□□□ 0.12
HDAC1-208ENST00000482310 MINDY4BA8MYZ0 360 aa15.82■□□□□ 0.12
HDAC1-208ENST00000482310 PATL2C9JE40 543 aaKnown RBP15.82■□□□□ 0.12
HDAC1-208ENST00000482310 FOXP2O15409 715 aa15.82■□□□□ 0.12
HDAC1-208ENST00000482310 ENTPD3O75355 529 aa15.82■□□□□ 0.12
HDAC1-208ENST00000482310 HSPD1P10809 573 aaKnown RBP15.82■□□□□ 0.12
HDAC1-208ENST00000482310 NBPF12Q5TAG4 269 aaPredicted RBP15.82■□□□□ 0.12
HDAC1-208ENST00000482310 SH3BP5LQ7L8J4 393 aa15.82■□□□□ 0.12
HDAC1-208ENST00000482310 FAM83AQ86UY5 434 aa15.82■□□□□ 0.12
HDAC1-208ENST00000482310 FAM151AQ8WW52 585 aa15.82■□□□□ 0.12
HDAC1-208ENST00000482310 CSRNP1Q96S65 589 aa15.82■□□□□ 0.12
HDAC1-208ENST00000482310 NAPBQ9H115 298 aa15.82■□□□□ 0.12
HDAC1-208ENST00000482310 SSC5DA1L4H1 1573 aa15.82■□□□□ 0.12
HDAC1-208ENST00000482310 SMIM22K7EJ46 135 aa15.81■□□□□ 0.12
HDAC1-208ENST00000482310 PTH1RQ03431 593 aa15.81■□□□□ 0.12
HDAC1-208ENST00000482310 DOCK1Q14185 1865 aa15.81■□□□□ 0.12
HDAC1-208ENST00000482310 FKBP1CQ5VVH2 108 aa15.81■□□□□ 0.12
HDAC1-208ENST00000482310 KIAA1211Q6ZU35 1233 aa15.81■□□□□ 0.12
HDAC1-208ENST00000482310 MIGA2Q7L4E1 593 aa15.81■□□□□ 0.12
HDAC1-208ENST00000482310 TICAM2Q86XR7 235 aa15.81■□□□□ 0.12
HDAC1-208ENST00000482310 IFNL3Q8IZI9 196 aa15.81■□□□□ 0.12
HDAC1-208ENST00000482310 NACAP1Q9BZK3 213 aa15.81■□□□□ 0.12
HDAC1-208ENST00000482310 ATP8A2Q9NTI2 1148 aa15.81■□□□□ 0.12
HDAC1-208ENST00000482310 USP17L12C9JPN9 530 aa15.8■□□□□ 0.12
HDAC1-208ENST00000482310 USP17L21D6R901 530 aa15.8■□□□□ 0.12
HDAC1-208ENST00000482310 CAPN15O75808 1086 aa15.8■□□□□ 0.12
HDAC1-208ENST00000482310 HSPA1AP0DMV8 641 aaKnown RBP15.8■□□□□ 0.12
HDAC1-208ENST00000482310 HSPA1BP0DMV9 641 aaKnown RBP15.8■□□□□ 0.12
HDAC1-208ENST00000482310 HAND2P61296 217 aa15.8■□□□□ 0.12
HDAC1-208ENST00000482310 TTLL12Q14166 644 aaPredicted RBP15.8■□□□□ 0.12
HDAC1-208ENST00000482310 AMOTL1Q8IY63 956 aa15.8■□□□□ 0.12
HDAC1-208ENST00000482310 TEPSINQ96N21 525 aa15.8■□□□□ 0.12
HDAC1-208ENST00000482310 PAPPA2Q9BXP8 1791 aa15.8■□□□□ 0.12
HDAC1-208ENST00000482310 RPAP1Q9BWH6 1393 aaPredicted RBP15.79■□□□□ 0.12
HDAC1-208ENST00000482310 CELF2O95319 508 aaKnown RBP15.79■□□□□ 0.12
HDAC1-208ENST00000482310 HLA-DOAP06340 250 aa15.79■□□□□ 0.12
HDAC1-208ENST00000482310 PLCD1P51178 756 aa15.79■□□□□ 0.12
HDAC1-208ENST00000482310 CTR9Q6PD62 1173 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms