RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 SNAPC2Q13487 334 aa11.97□□□□□ -0.49
TMEM39A-207ENST00000482162 CCL15Q16663 113 aa11.97□□□□□ -0.49
TMEM39A-207ENST00000482162 OTOP1Q7RTM1 612 aa11.97□□□□□ -0.49
TMEM39A-207ENST00000482162 PANK1Q8TE04 598 aa11.97□□□□□ -0.49
TMEM39A-207ENST00000482162 DBNDD2Q9BQY9 259 aa11.97□□□□□ -0.49
TMEM39A-207ENST00000482162 C1orf115Q9H7X2 142 aa11.97□□□□□ -0.49
TMEM39A-207ENST00000482162 DDX4Q9NQI0 724 aaKnown RBP11.97□□□□□ -0.49
TMEM39A-207ENST00000482162 DDTLA6NHG4 134 aaPredicted RBP11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 BTBD19C9JJ37 291 aa11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 LDHCP07864 332 aa11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 MS4A1P11836 297 aa11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 PPP4CP60510 307 aa11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 GSTO1P78417 241 aa11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 SP3Q02447 781 aa11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 GORABQ5T7V8 394 aa11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 EAF2Q96CJ1 260 aaPredicted RBP11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 ERO1AQ96HE7 468 aa11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 ZBTB40Q9NUA8 1239 aa11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 DBNLQ9UJU6 430 aaKnown RBP11.96□□□□□ -0.49
TMEM39A-207ENST00000482162 CXCL11O14625 94 aa11.95□□□□□ -0.5
TMEM39A-207ENST00000482162 TLR2O60603 784 aa11.95□□□□□ -0.5
TMEM39A-207ENST00000482162 CYP2E1P05181 493 aaPredicted RBP11.95□□□□□ -0.5
TMEM39A-207ENST00000482162 CCDC158Q5M9N0 1113 aa11.95□□□□□ -0.5
TMEM39A-207ENST00000482162 ZFYVE28Q9HCC9 887 aa11.95□□□□□ -0.5
TMEM39A-207ENST00000482162 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.95□□□□□ -0.5
TMEM39A-207ENST00000482162 COL2A1P02458 1487 aaPredicted RBP11.95□□□□□ -0.5
TMEM39A-207ENST00000482162 CTNND1O60716 968 aaKnown RBP11.94□□□□□ -0.5
TMEM39A-207ENST00000482162 PTPRAP18433 802 aa11.94□□□□□ -0.5
TMEM39A-207ENST00000482162 ANKRD23Q86SG2 305 aa11.94□□□□□ -0.5
TMEM39A-207ENST00000482162 METTL16Q86W50 562 aaKnown RBP11.94□□□□□ -0.5
TMEM39A-207ENST00000482162 SIRT2Q8IXJ6 389 aa11.94□□□□□ -0.5
TMEM39A-207ENST00000482162 PTPN22Q9Y2R2 807 aa11.94□□□□□ -0.5
TMEM39A-207ENST00000482162 TRIM17Q9Y577 477 aa11.94□□□□□ -0.5
TMEM39A-207ENST00000482162 TNRC18O15417 2968 aaPredicted RBP11.94□□□□□ -0.5
TMEM39A-207ENST00000482162 ADGRA2Q96PE1 1338 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 SLC34A2O95436 690 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 SLURP2P0DP57 97 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 TAF1CQ15572 869 aaPredicted RBP11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 GPAT2Q6NUI2 795 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 C17orf99Q6UX52 265 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 ERC1Q8IUD2 1116 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 RPAP2Q8IXW5 612 aaPredicted RBP11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 SCYL3Q8IZE3 742 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 CD99L2Q8TCZ2 262 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 ARMC5Q96C12 935 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 SNRKQ9NRH2 765 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 RAI14Q9P0K7 980 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 LRP2BPQ9P2M1 347 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 AFG3L2Q9Y4W6 797 aa11.93□□□□□ -0.5
TMEM39A-207ENST00000482162 OS9Q13438 667 aaPredicted RBP11.92□□□□□ -0.5
TMEM39A-207ENST00000482162 TTC39AQ5SRH9 613 aa11.92□□□□□ -0.5
TMEM39A-207ENST00000482162 TMED8Q6PL24 325 aaPredicted RBP11.92□□□□□ -0.5
TMEM39A-207ENST00000482162 ADGRA1Q86SQ6 560 aa11.92□□□□□ -0.5
TMEM39A-207ENST00000482162 OSBPL5Q9H0X9 879 aaPredicted RBP11.92□□□□□ -0.5
TMEM39A-207ENST00000482162 EFCC1Q9HA90 598 aa11.92□□□□□ -0.5
TMEM39A-207ENST00000482162 PIH1D3Q9NQM4 214 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-207ENST00000482162 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-207ENST00000482162 RCAN3Q9UKA8 241 aa11.92□□□□□ -0.5
TMEM39A-207ENST00000482162 PDE4DIPQ5VU43 2346 aa11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 A0A0G2JLL6 359 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 ZAP70P43403 619 aa11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 SOX10P56693 466 aa11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 PDE3AQ14432 1141 aa11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 HSP90AB4PQ58FF6 505 aa11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 NAA16Q6N069 864 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 RHPN1Q8TCX5 695 aa11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 SH3RF3Q8TEJ3 882 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 CCDC8Q9H0W5 538 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 SLC45A1Q9Y2W3 748 aa11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 ZHX2Q9Y6X8 837 aa11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 KIAA0100Q14667 2235 aaKnown RBP11.91□□□□□ -0.5
TMEM39A-207ENST00000482162 AK9Q5TCS8 1911 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 HTTP42858 3142 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 PDHXO00330 501 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 BAG3O95817 575 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 GNRH1P01148 92 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 PLCG2P16885 1265 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 LACTBP83111 547 aaPredicted RBP11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 PICALMQ13492 652 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 RRP1BQ14684 758 aaKnown RBP11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 ARHGEF6Q15052 776 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 ZSCAN29Q8IWY8 852 aaPredicted RBP11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 DHX36Q9H2U1 1008 aaKnown RBP11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 PICK1Q9NRD5 415 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 PI4KBQ9UBF8 816 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 EXOC6BQ9Y2D4 811 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 COG6Q9Y2V7 657 aa11.9□□□□□ -0.5
TMEM39A-207ENST00000482162 BCRP11274 1271 aa11.89□□□□□ -0.51
TMEM39A-207ENST00000482162 FASTKD5Q7L8L6 764 aaKnown RBP11.89□□□□□ -0.51
TMEM39A-207ENST00000482162 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
TMEM39A-207ENST00000482162 TEX11Q8IYF3 940 aa11.89□□□□□ -0.51
TMEM39A-207ENST00000482162 HERC5Q9UII4 1024 aaKnown RBP11.89□□□□□ -0.51
TMEM39A-207ENST00000482162 DOCK2Q92608 1830 aa11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 RAB11FIP3O75154 756 aa11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 CTGFP29279 349 aa11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 CAP2P40123 477 aa11.88□□□□□ -0.51
TMEM39A-207ENST00000482162 AACSQ86V21 672 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms