RNA–Protein interactions for RNA: ENST00000482143.5

TSPAN1-207, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-207ENST00000482143 SLC4A10Q6U841 1118 aa16.16■□□□□ 0.18
TSPAN1-207ENST00000482143 HHIPL2Q6UWX4 724 aa16.16■□□□□ 0.18
TSPAN1-207ENST00000482143 DIS3LQ8TF46 1054 aaKnown RBP16.16■□□□□ 0.18
TSPAN1-207ENST00000482143 MRIQ9BWK5 157 aa16.16■□□□□ 0.18
TSPAN1-207ENST00000482143 BICC1Q9H694 974 aaKnown RBP16.16■□□□□ 0.18
TSPAN1-207ENST00000482143 PAK6Q9NQU5 681 aaPredicted RBP16.16■□□□□ 0.18
TSPAN1-207ENST00000482143 IRF5Q13568 498 aa16.15■□□□□ 0.18
TSPAN1-207ENST00000482143 NOL9Q5SY16 702 aaKnown RBP16.15■□□□□ 0.18
TSPAN1-207ENST00000482143 GPAT2Q6NUI2 795 aa16.15■□□□□ 0.18
TSPAN1-207ENST00000482143 TDHQ8IZJ6 230 aa16.15■□□□□ 0.18
TSPAN1-207ENST00000482143 MRPL50Q8N5N7 158 aaKnown RBP16.15■□□□□ 0.18
TSPAN1-207ENST00000482143 COL25A1Q9BXS0 654 aaPredicted RBP16.15■□□□□ 0.18
TSPAN1-207ENST00000482143 UBE2OQ9C0C9 1292 aaKnown RBP16.15■□□□□ 0.18
TSPAN1-207ENST00000482143 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.15■□□□□ 0.18
TSPAN1-207ENST00000482143 ZNF112Q9UJU3 913 aa16.15■□□□□ 0.18
TSPAN1-207ENST00000482143 SUGT1Q9Y2Z0 365 aa16.15■□□□□ 0.18
TSPAN1-207ENST00000482143 LRIT3Q3SXY7 679 aa16.14■□□□□ 0.17
TSPAN1-207ENST00000482143 LRRC24Q50LG9 513 aa16.14■□□□□ 0.17
TSPAN1-207ENST00000482143 ANKLE1Q8NAG6 615 aa16.14■□□□□ 0.17
TSPAN1-207ENST00000482143 MTMR10Q9NXD2 777 aa16.14■□□□□ 0.17
TSPAN1-207ENST00000482143 ZHX2Q9Y6X8 837 aa16.14■□□□□ 0.17
TSPAN1-207ENST00000482143 KIF16BQ96L93 1317 aa16.14■□□□□ 0.17
TSPAN1-207ENST00000482143 PDE8BO95263 885 aa16.13■□□□□ 0.17
TSPAN1-207ENST00000482143 MAGEA10P43363 369 aaPredicted RBP16.13■□□□□ 0.17
TSPAN1-207ENST00000482143 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.13■□□□□ 0.17
TSPAN1-207ENST00000482143 NBPF3Q9H094 633 aa16.13■□□□□ 0.17
TSPAN1-207ENST00000482143 CRISPLD2Q9H0B8 497 aa16.13■□□□□ 0.17
TSPAN1-207ENST00000482143 PTPRCP08575 1304 aa16.13■□□□□ 0.17
TSPAN1-207ENST00000482143 UNC80Q8N2C7 3258 aa16.13■□□□□ 0.17
TSPAN1-207ENST00000482143 PHIPQ8WWQ0 1821 aa16.12■□□□□ 0.17
TSPAN1-207ENST00000482143 A0A0G2JLL6 359 aaPredicted RBP16.12■□□□□ 0.17
TSPAN1-207ENST00000482143 FGFR2P21802 821 aa16.12■□□□□ 0.17
TSPAN1-207ENST00000482143 PRRT2Q7Z6L0 340 aaPredicted RBP16.12■□□□□ 0.17
TSPAN1-207ENST00000482143 ZSCAN29Q8IWY8 852 aaPredicted RBP16.12■□□□□ 0.17
TSPAN1-207ENST00000482143 FAM9BQ8IZU0 186 aa16.12■□□□□ 0.17
TSPAN1-207ENST00000482143 ANKRD13CQ8N6S4 541 aa16.12■□□□□ 0.17
TSPAN1-207ENST00000482143 USP44Q9H0E7 712 aa16.12■□□□□ 0.17
TSPAN1-207ENST00000482143 C11orf49Q9H6J7 331 aa16.12■□□□□ 0.17
TSPAN1-207ENST00000482143 MYH2Q9UKX2 1941 aa16.11■□□□□ 0.17
TSPAN1-207ENST00000482143 HMGCRP04035 888 aa16.11■□□□□ 0.17
TSPAN1-207ENST00000482143 IFIT1P09914 478 aaKnown RBP16.11■□□□□ 0.17
TSPAN1-207ENST00000482143 SCYL3Q8IZE3 742 aa16.11■□□□□ 0.17
TSPAN1-207ENST00000482143 WDR66Q8TBY9 1149 aa16.11■□□□□ 0.17
TSPAN1-207ENST00000482143 HMX1Q9NP08 348 aaPredicted RBP16.11■□□□□ 0.17
TSPAN1-207ENST00000482143 PNMA3Q9UL41 463 aa16.11■□□□□ 0.17
TSPAN1-207ENST00000482143 SLC45A1Q9Y2W3 748 aa16.11■□□□□ 0.17
TSPAN1-207ENST00000482143 LRRFIP2Q9Y608 721 aaKnown RBP16.11■□□□□ 0.17
TSPAN1-207ENST00000482143 TRIM75PA6NK02 468 aa16.1■□□□□ 0.17
TSPAN1-207ENST00000482143 RFX5P48382 616 aaPredicted RBP16.1■□□□□ 0.17
TSPAN1-207ENST00000482143 NFIAQ12857 509 aa16.1■□□□□ 0.17
TSPAN1-207ENST00000482143 CDC42EP5Q6NZY7 148 aa16.1■□□□□ 0.17
TSPAN1-207ENST00000482143 KLHDC4Q8TBB5 520 aa16.1■□□□□ 0.17
TSPAN1-207ENST00000482143 SSH1Q8WYL5 1049 aa16.1■□□□□ 0.17
TSPAN1-207ENST00000482143 USP40Q9NVE5 1235 aa16.1■□□□□ 0.17
TSPAN1-207ENST00000482143 DAGLAQ9Y4D2 1042 aa16.1■□□□□ 0.17
TSPAN1-207ENST00000482143 PTPRAP18433 802 aa16.09■□□□□ 0.17
TSPAN1-207ENST00000482143 DIXDC1Q155Q3 683 aa16.09■□□□□ 0.17
TSPAN1-207ENST00000482143 ATAD5Q96QE3 1844 aa16.09■□□□□ 0.17
TSPAN1-207ENST00000482143 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
TSPAN1-207ENST00000482143 PUM3Q15397 648 aaKnown RBP16.08■□□□□ 0.16
TSPAN1-207ENST00000482143 AFG3L2Q9Y4W6 797 aa16.08■□□□□ 0.16
TSPAN1-207ENST00000482143 LDHBP07195 334 aaKnown RBP16.07■□□□□ 0.16
TSPAN1-207ENST00000482143 FAM198AQ9UFP1 575 aa16.07■□□□□ 0.16
TSPAN1-207ENST00000482143 AGTPBP1Q9UPW5 1226 aa16.07■□□□□ 0.16
TSPAN1-207ENST00000482143 LOC285556D6RIA3 1793 aa16.06■□□□□ 0.16
TSPAN1-207ENST00000482143 E9PSI1 815 aa16.06■□□□□ 0.16
TSPAN1-207ENST00000482143 SLC5A1P13866 664 aa16.06■□□□□ 0.16
TSPAN1-207ENST00000482143 SLFN5Q08AF3 891 aa16.06■□□□□ 0.16
TSPAN1-207ENST00000482143 FAM110CQ1W6H9 321 aa16.06■□□□□ 0.16
TSPAN1-207ENST00000482143 ATG9AQ7Z3C6 839 aa16.06■□□□□ 0.16
TSPAN1-207ENST00000482143 FAM161BQ96MY7 647 aa16.06■□□□□ 0.16
TSPAN1-207ENST00000482143 PHF20L1A8MW92 1017 aa16.05■□□□□ 0.16
TSPAN1-207ENST00000482143 EYA2O00167 538 aa16.05■□□□□ 0.16
TSPAN1-207ENST00000482143 ZBTB22O15209 634 aa16.05■□□□□ 0.16
TSPAN1-207ENST00000482143 PRDX5P30044 214 aa16.05■□□□□ 0.16
TSPAN1-207ENST00000482143 RGS3P49796 1198 aa16.05■□□□□ 0.16
TSPAN1-207ENST00000482143 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
TSPAN1-207ENST00000482143 ZFPM1Q8IX07 1006 aa16.05■□□□□ 0.16
TSPAN1-207ENST00000482143 TRMT2AQ8IZ69 625 aaKnown RBP16.05■□□□□ 0.16
TSPAN1-207ENST00000482143 PLXNB2O15031 1838 aa16.05■□□□□ 0.16
TSPAN1-207ENST00000482143 CTNND1O60716 968 aaKnown RBP16.04■□□□□ 0.16
TSPAN1-207ENST00000482143 GCLCP48506 637 aaPredicted RBP16.04■□□□□ 0.16
TSPAN1-207ENST00000482143 TRIM32Q13049 653 aa16.04■□□□□ 0.16
TSPAN1-207ENST00000482143 PABPC4Q13310 644 aaKnown RBP eCLIP16.04■□□□□ 0.16
TSPAN1-207ENST00000482143 ALDH1L2Q3SY69 923 aa16.04■□□□□ 0.16
TSPAN1-207ENST00000482143 TREML2Q5T2D2 321 aa16.04■□□□□ 0.16
TSPAN1-207ENST00000482143 GNL3LQ9NVN8 582 aaKnown RBP16.04■□□□□ 0.16
TSPAN1-207ENST00000482143 FRMPD3Q5JV73 1810 aa16.03■□□□□ 0.16
TSPAN1-207ENST00000482143 ENTPD3O75355 529 aa16.03■□□□□ 0.16
TSPAN1-207ENST00000482143 PICALMQ13492 652 aa16.03■□□□□ 0.16
TSPAN1-207ENST00000482143 LPIN2Q92539 896 aa16.03■□□□□ 0.16
TSPAN1-207ENST00000482143 LBHD1Q9BQE6 289 aaPredicted RBP16.03■□□□□ 0.16
TSPAN1-207ENST00000482143 FBXO3Q9UK99 471 aa16.03■□□□□ 0.16
TSPAN1-207ENST00000482143 OGDHLQ9ULD0 1010 aa16.03■□□□□ 0.16
TSPAN1-207ENST00000482143 ATRNL1Q5VV63 1379 aa16.02■□□□□ 0.16
TSPAN1-207ENST00000482143 ZNF697Q5TEC3 545 aa16.02■□□□□ 0.16
TSPAN1-207ENST00000482143 CCDC84Q86UT8 332 aaPredicted RBP16.02■□□□□ 0.16
TSPAN1-207ENST00000482143 PROCA1Q8NCQ7 364 aaPredicted RBP16.02■□□□□ 0.16
TSPAN1-207ENST00000482143 GUCD1Q96NT3 240 aa16.02■□□□□ 0.16
TSPAN1-207ENST00000482143 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms