RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 FAM83AQ86UY5 434 aa23.26■■□□□ 1.31
SEMA4D-218ENST00000482128 U3KPZ7 1027 aaPredicted RBP23.26■■□□□ 1.31
SEMA4D-218ENST00000482128 TCP10L2B9ZVM9 353 aa23.25■■□□□ 1.31
SEMA4D-218ENST00000482128 PTH1RQ03431 593 aa23.25■■□□□ 1.31
SEMA4D-218ENST00000482128 NFIAQ12857 509 aa23.25■■□□□ 1.31
SEMA4D-218ENST00000482128 MAP4K1Q92918 833 aa23.25■■□□□ 1.31
SEMA4D-218ENST00000482128 DCPSQ96C86 337 aaKnown RBP23.25■■□□□ 1.31
SEMA4D-218ENST00000482128 BACH2Q9BYV9 841 aa23.25■■□□□ 1.31
SEMA4D-218ENST00000482128 OSBPL5Q9H0X9 879 aaPredicted RBP23.25■■□□□ 1.31
SEMA4D-218ENST00000482128 UPF2Q9HAU5 1272 aaKnown RBP23.25■■□□□ 1.31
SEMA4D-218ENST00000482128 EPB41L4AQ9HCS5 686 aaPredicted RBP23.25■■□□□ 1.31
SEMA4D-218ENST00000482128 MCM9Q9NXL9 1143 aa23.25■■□□□ 1.31
SEMA4D-218ENST00000482128 ARPP21Q9UBL0 812 aaPredicted RBP23.25■■□□□ 1.31
SEMA4D-218ENST00000482128 FOXP2O15409 715 aa23.24■■□□□ 1.31
SEMA4D-218ENST00000482128 GPBP1L1Q9HC44 474 aaPredicted RBP23.24■■□□□ 1.31
SEMA4D-218ENST00000482128 NMRK2Q9NPI5 230 aa23.24■■□□□ 1.31
SEMA4D-218ENST00000482128 DDX4Q9NQI0 724 aaKnown RBP23.24■■□□□ 1.31
SEMA4D-218ENST00000482128 FAM198AQ9UFP1 575 aa23.24■■□□□ 1.31
SEMA4D-218ENST00000482128 MKRN1Q9UHC7 482 aaKnown RBP23.24■■□□□ 1.31
SEMA4D-218ENST00000482128 TCP10Q12799 353 aa23.23■■□□□ 1.31
SEMA4D-218ENST00000482128 FAM151AQ8WW52 585 aa23.23■■□□□ 1.31
SEMA4D-218ENST00000482128 DHX36Q9H2U1 1008 aaKnown RBP23.23■■□□□ 1.31
SEMA4D-218ENST00000482128 ECM29Q5VYK3 1845 aa23.23■■□□□ 1.31
SEMA4D-218ENST00000482128 ASTN2O75129 1339 aaPredicted RBP23.23■■□□□ 1.31
SEMA4D-218ENST00000482128 COL2A1P02458 1487 aaPredicted RBP23.23■■□□□ 1.31
SEMA4D-218ENST00000482128 FGAP02671 866 aa23.22■■□□□ 1.31
SEMA4D-218ENST00000482128 POLR3DP05423 398 aaPredicted RBP23.22■■□□□ 1.31
SEMA4D-218ENST00000482128 HLA-DOAP06340 250 aa23.22■■□□□ 1.31
SEMA4D-218ENST00000482128 MCCP23508 829 aa23.22■■□□□ 1.31
SEMA4D-218ENST00000482128 SULF1Q8IWU6 871 aa23.22■■□□□ 1.31
SEMA4D-218ENST00000482128 CLEC11AQ9Y240 323 aa23.22■■□□□ 1.31
SEMA4D-218ENST00000482128 PPP2R3BQ9Y5P8 575 aa23.22■■□□□ 1.31
SEMA4D-218ENST00000482128 RBM8AQ9Y5S9 174 aaKnown RBP23.22■■□□□ 1.31
SEMA4D-218ENST00000482128 IMMTQ16891 758 aaKnown RBP23.21■■□□□ 1.31
SEMA4D-218ENST00000482128 SBK1Q52WX2 424 aa23.21■■□□□ 1.31
SEMA4D-218ENST00000482128 TTC6Q86TZ1 520 aa23.21■■□□□ 1.31
SEMA4D-218ENST00000482128 LDHDQ86WU2 507 aa23.21■■□□□ 1.31
SEMA4D-218ENST00000482128 ZSCAN29Q8IWY8 852 aaPredicted RBP23.21■■□□□ 1.31
SEMA4D-218ENST00000482128 PGAP2Q9UHJ9 254 aa23.21■■□□□ 1.31
SEMA4D-218ENST00000482128 SAP30BPQ9UHR5 308 aaKnown RBP23.21■■□□□ 1.31
SEMA4D-218ENST00000482128 CNTNAP1P78357 1384 aa23.2■■□□□ 1.3
SEMA4D-218ENST00000482128 USP17L12C9JPN9 530 aa23.2■■□□□ 1.3
SEMA4D-218ENST00000482128 USP17L21D6R901 530 aa23.2■■□□□ 1.3
SEMA4D-218ENST00000482128 SEC24BO95487 1268 aa23.2■■□□□ 1.3
SEMA4D-218ENST00000482128 YY1P25490 414 aa23.2■■□□□ 1.3
SEMA4D-218ENST00000482128 RASA3Q14644 834 aa23.2■■□□□ 1.3
SEMA4D-218ENST00000482128 RNF20Q5VTR2 975 aa23.2■■□□□ 1.3
SEMA4D-218ENST00000482128 CTR9Q6PD62 1173 aa23.2■■□□□ 1.3
SEMA4D-218ENST00000482128 USP26Q9BXU7 913 aa23.2■■□□□ 1.3
SEMA4D-218ENST00000482128 DEFB129Q9H1M3 183 aa23.2■■□□□ 1.3
SEMA4D-218ENST00000482128 NAV1Q8NEY1 1877 aa23.19■■□□□ 1.3
SEMA4D-218ENST00000482128 ATRNL1Q5VV63 1379 aa23.19■■□□□ 1.3
SEMA4D-218ENST00000482128 SLC3A2P08195 630 aaKnown RBP23.19■■□□□ 1.3
SEMA4D-218ENST00000482128 PALD1Q9ULE6 856 aa23.19■■□□□ 1.3
SEMA4D-218ENST00000482128 FOCADQ5VW36 1801 aa23.19■■□□□ 1.3
SEMA4D-218ENST00000482128 MINDY4BA8MYZ0 360 aa23.18■■□□□ 1.3
SEMA4D-218ENST00000482128 ZNF213O14771 459 aa23.18■■□□□ 1.3
SEMA4D-218ENST00000482128 KRT26Q7Z3Y9 468 aa23.18■■□□□ 1.3
SEMA4D-218ENST00000482128 TMEM39BQ9GZU3 492 aa23.18■■□□□ 1.3
SEMA4D-218ENST00000482128 ZKSCAN1P17029 563 aaPredicted RBP23.17■■□□□ 1.3
SEMA4D-218ENST00000482128 PPARAQ07869 468 aa23.17■■□□□ 1.3
SEMA4D-218ENST00000482128 C12orf60Q5U649 245 aa23.17■■□□□ 1.3
SEMA4D-218ENST00000482128 ZFPM1Q8IX07 1006 aa23.17■■□□□ 1.3
SEMA4D-218ENST00000482128 HOOK2Q96ED9 719 aa23.17■■□□□ 1.3
SEMA4D-218ENST00000482128 PI4KBQ9UBF8 816 aa23.17■■□□□ 1.3
SEMA4D-218ENST00000482128 TAOK2Q9UL54 1235 aa23.17■■□□□ 1.3
SEMA4D-218ENST00000482128 CDK5RAP2Q96SN8 1893 aa23.17■■□□□ 1.3
SEMA4D-218ENST00000482128 DDX60LQ5H9U9 1706 aaKnown RBP23.16■■□□□ 1.3
SEMA4D-218ENST00000482128 HSPA4P34932 840 aa23.16■■□□□ 1.3
SEMA4D-218ENST00000482128 NECTIN1Q15223 517 aa23.16■■□□□ 1.3
SEMA4D-218ENST00000482128 CREB3L3Q68CJ9 461 aa23.16■■□□□ 1.3
SEMA4D-218ENST00000482128 CDC37L1Q7L3B6 337 aa23.16■■□□□ 1.3
SEMA4D-218ENST00000482128 CSRNP1Q96S65 589 aa23.16■■□□□ 1.3
SEMA4D-218ENST00000482128 TRIM34Q9BYJ4 488 aa23.16■■□□□ 1.3
SEMA4D-218ENST00000482128 ANAPC4Q9UJX5 808 aa23.16■■□□□ 1.3
SEMA4D-218ENST00000482128 DDTLA6NHG4 134 aaPredicted RBP23.15■■□□□ 1.3
SEMA4D-218ENST00000482128 CYP2D6P10635 497 aa23.15■■□□□ 1.3
SEMA4D-218ENST00000482128 SLC4A8Q2Y0W8 1093 aa23.15■■□□□ 1.3
SEMA4D-218ENST00000482128 EHD4Q9H223 541 aa23.15■■□□□ 1.3
SEMA4D-218ENST00000482128 ZNF287Q9HBT7 754 aa23.15■■□□□ 1.3
SEMA4D-218ENST00000482128 ROBO3Q96MS0 1386 aa23.14■■□□□ 1.3
SEMA4D-218ENST00000482128 CYP2D7A0A087X1C5 515 aa23.14■■□□□ 1.29
SEMA4D-218ENST00000482128 SLC27A2O14975 620 aa23.14■■□□□ 1.29
SEMA4D-218ENST00000482128 POTEIP0CG38 1075 aa23.14■■□□□ 1.29
SEMA4D-218ENST00000482128 POTEJP0CG39 1038 aa23.14■■□□□ 1.29
SEMA4D-218ENST00000482128 HAND2P61296 217 aa23.14■■□□□ 1.29
SEMA4D-218ENST00000482128 SH3BP5LQ7L8J4 393 aa23.14■■□□□ 1.29
SEMA4D-218ENST00000482128 CRACR2BQ8N4Y2 399 aaPredicted RBP23.14■■□□□ 1.29
SEMA4D-218ENST00000482128 RNF41Q9H4P4 317 aaPredicted RBP23.14■■□□□ 1.29
SEMA4D-218ENST00000482128 SERPINB13Q9UIV8 391 aa23.14■■□□□ 1.29
SEMA4D-218ENST00000482128 SCAF8Q9UPN6 1271 aaKnown RBP23.14■■□□□ 1.29
SEMA4D-218ENST00000482128 CYP21A2P08686 494 aa23.13■■□□□ 1.29
SEMA4D-218ENST00000482128 PCP11498 1178 aaKnown RBP23.13■■□□□ 1.29
SEMA4D-218ENST00000482128 PLCD1P51178 756 aa23.13■■□□□ 1.29
SEMA4D-218ENST00000482128 PDE4BQ07343 736 aa23.13■■□□□ 1.29
SEMA4D-218ENST00000482128 SUPT20HL1Q3ZLR7 823 aa23.13■■□□□ 1.29
SEMA4D-218ENST00000482128 FOXP4Q8IVH2 680 aaPredicted RBP23.13■■□□□ 1.29
SEMA4D-218ENST00000482128 SWAP70Q9UH65 585 aa23.13■■□□□ 1.29
SEMA4D-218ENST00000482128 HERC5Q9UII4 1024 aaKnown RBP23.13■■□□□ 1.29
SEMA4D-218ENST00000482128 ADM5C9JUS6 153 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms