RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 NTRK3Q16288 839 aa17.72■□□□□ 0.43
C9orf3-218ENST00000482056 MFSD6Q6ZSS7 791 aa17.72■□□□□ 0.43
C9orf3-218ENST00000482056 TRIM22Q8IYM9 498 aa17.72■□□□□ 0.43
C9orf3-218ENST00000482056 KIF18AQ8NI77 898 aa17.72■□□□□ 0.43
C9orf3-218ENST00000482056 MPHOSPH8Q99549 860 aa17.72■□□□□ 0.43
C9orf3-218ENST00000482056 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.72■□□□□ 0.43
C9orf3-218ENST00000482056 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.72■□□□□ 0.43
C9orf3-218ENST00000482056 CGNQ9P2M7 1197 aaKnown RBP17.72■□□□□ 0.43
C9orf3-218ENST00000482056 DENND2AQ9ULE3 1009 aa17.72■□□□□ 0.43
C9orf3-218ENST00000482056 KAT6BQ8WYB5 2073 aa17.72■□□□□ 0.43
C9orf3-218ENST00000482056 KCNJ6P48051 423 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 AKNAD1Q5T1N1 836 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 MAP3K14Q99558 947 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 SLC26A6Q9BXS9 759 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 UBN2Q6ZU65 1347 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 DISP2A7MBM2 1401 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 ERICH2A1L162 156 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 USP27XA6NNY8 438 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 CCP110O43303 1012 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 TUBB4AP04350 444 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 SHC4Q6S5L8 630 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 MTA3Q9BTC8 594 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 NID2Q14112 1375 aa17.71■□□□□ 0.43
C9orf3-218ENST00000482056 IFNAR1P17181 557 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 FANCCQ00597 558 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 MYL5Q02045 173 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 NCAPHQ15003 741 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 TMTC2Q8N394 836 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 HELBQ8NG08 1087 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-218ENST00000482056 SYTL4Q96C24 671 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-218ENST00000482056 SLC4A9Q96Q91 983 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 FEZ1Q99689 392 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 ZSWIM5Q9P217 1185 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 PSDA5PKW4 1024 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-218ENST00000482056 EXOC5O00471 708 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 RANBP6O60518 1105 aaKnown RBP17.7■□□□□ 0.42
C9orf3-218ENST00000482056 TDO2P48775 406 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 CTDSPL2Q05D32 466 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 RASGRF1Q13972 1273 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 NOSTRINQ8IVI9 506 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 ELOA2Q8IYF1 753 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-218ENST00000482056 KRI1Q8N9T8 703 aaKnown RBP17.7■□□□□ 0.42
C9orf3-218ENST00000482056 RNF41Q9H4P4 317 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-218ENST00000482056 ARMT1Q9H993 441 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 SENP2Q9HC62 589 aa17.7■□□□□ 0.42
C9orf3-218ENST00000482056 EPB41L4AQ9HCS5 686 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-218ENST00000482056 TRMT1Q9NXH9 659 aaKnown RBP17.7■□□□□ 0.42
C9orf3-218ENST00000482056 COL14A1Q05707 1796 aaKnown RBP17.69■□□□□ 0.42
C9orf3-218ENST00000482056 RCAN1P53805 252 aa17.69■□□□□ 0.42
C9orf3-218ENST00000482056 CNNM3Q8NE01 707 aa17.69■□□□□ 0.42
C9orf3-218ENST00000482056 STAG1Q8WVM7 1258 aa17.69■□□□□ 0.42
C9orf3-218ENST00000482056 FAM217BQ9NTX9 383 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-218ENST00000482056 TAOK2Q9UL54 1235 aa17.69■□□□□ 0.42
C9orf3-218ENST00000482056 PNPLA7Q6ZV29 1317 aa17.69■□□□□ 0.42
C9orf3-218ENST00000482056 PLCH1Q4KWH8 1693 aa17.69■□□□□ 0.42
C9orf3-218ENST00000482056 LMOD1P29536 600 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-218ENST00000482056 WTAPQ15007 396 aa17.68■□□□□ 0.42
C9orf3-218ENST00000482056 RTN1Q16799 776 aa17.68■□□□□ 0.42
C9orf3-218ENST00000482056 NOL10Q9BSC4 688 aaKnown RBP17.68■□□□□ 0.42
C9orf3-218ENST00000482056 MYL10Q9BUA6 226 aa17.68■□□□□ 0.42
C9orf3-218ENST00000482056 UTP14AQ9BVJ6 771 aaKnown RBP17.68■□□□□ 0.42
C9orf3-218ENST00000482056 TOMM22Q9NS69 142 aa17.68■□□□□ 0.42
C9orf3-218ENST00000482056 KCNH3Q9ULD8 1083 aa17.68■□□□□ 0.42
C9orf3-218ENST00000482056 GSG1L2A8MUP6 293 aa17.68■□□□□ 0.42
C9orf3-218ENST00000482056 SERPINC1P01008 464 aa17.68■□□□□ 0.42
C9orf3-218ENST00000482056 IGHMBP2P38935 993 aaKnown RBP17.68■□□□□ 0.42
C9orf3-218ENST00000482056 CCDC152Q4G0S7 254 aa17.68■□□□□ 0.42
C9orf3-218ENST00000482056 KRBA2Q6ZNG9 492 aa17.68■□□□□ 0.42
C9orf3-218ENST00000482056 NKX2-3Q8TAU0 364 aa17.68■□□□□ 0.42
C9orf3-218ENST00000482056 SLC4A4Q9Y6R1 1079 aa17.68■□□□□ 0.42
C9orf3-218ENST00000482056 MMP1P03956 469 aa17.67■□□□□ 0.42
C9orf3-218ENST00000482056 UBASH3AP57075 661 aa17.67■□□□□ 0.42
C9orf3-218ENST00000482056 PNOCQ13519 176 aa17.67■□□□□ 0.42
C9orf3-218ENST00000482056 PARP10Q53GL7 1025 aa17.67■□□□□ 0.42
C9orf3-218ENST00000482056 RILPL1Q5EBL4 403 aa17.67■□□□□ 0.42
C9orf3-218ENST00000482056 ARMCX5Q6P1M9 558 aa17.67■□□□□ 0.42
C9orf3-218ENST00000482056 ERO1AQ96HE7 468 aa17.67■□□□□ 0.42
C9orf3-218ENST00000482056 FOXP1Q9H334 677 aaPredicted RBP17.67■□□□□ 0.42
C9orf3-218ENST00000482056 CEP131Q9UPN4 1083 aa17.67■□□□□ 0.42
C9orf3-218ENST00000482056 DEXIO95424 95 aa17.66■□□□□ 0.42
C9orf3-218ENST00000482056 RRP12Q5JTH9 1297 aaKnown RBP17.66■□□□□ 0.42
C9orf3-218ENST00000482056 ISM2Q6H9L7 571 aa17.66■□□□□ 0.42
C9orf3-218ENST00000482056 CLIC6Q96NY7 704 aa17.66■□□□□ 0.42
C9orf3-218ENST00000482056 DACH1Q9UI36 760 aa17.66■□□□□ 0.42
C9orf3-218ENST00000482056 CBX1P83916 185 aa17.66■□□□□ 0.42
C9orf3-218ENST00000482056 ZNF335Q9H4Z2 1342 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-218ENST00000482056 SUSD4Q5VX71 490 aa17.65■□□□□ 0.42
C9orf3-218ENST00000482056 DIS3L2Q8IYB7 885 aaKnown RBP17.65■□□□□ 0.42
C9orf3-218ENST00000482056 PPP1R13BQ96KQ4 1090 aa17.65■□□□□ 0.42
C9orf3-218ENST00000482056 INCENPQ9NQS7 918 aa17.65■□□□□ 0.42
C9orf3-218ENST00000482056 LRP2BPQ9P2M1 347 aa17.65■□□□□ 0.42
C9orf3-218ENST00000482056 BCORQ6W2J9 1755 aa17.65■□□□□ 0.42
C9orf3-218ENST00000482056 STRCQ7RTU9 1775 aa17.65■□□□□ 0.42
C9orf3-218ENST00000482056 RTL9Q8NET4 1388 aa17.65■□□□□ 0.42
C9orf3-218ENST00000482056 SLU7O95391 586 aaKnown RBP17.64■□□□□ 0.41
C9orf3-218ENST00000482056 EIF5P55010 431 aaKnown RBP17.64■□□□□ 0.41
C9orf3-218ENST00000482056 PPP2R5BQ15173 497 aa17.64■□□□□ 0.41
C9orf3-218ENST00000482056 CFAP100Q494V2 611 aa17.64■□□□□ 0.41
C9orf3-218ENST00000482056 LONRF3Q496Y0 759 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms