RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 PDE4CQ08493 712 aa4.2□□□□□ -1.74
USH2A-204ENST00000481786 ZNF211Q13398 564 aaPredicted RBP4.2□□□□□ -1.74
USH2A-204ENST00000481786 SPRED3Q2MJR0 410 aa4.2□□□□□ -1.74
USH2A-204ENST00000481786 C8orf34Q49A92 452 aa4.2□□□□□ -1.74
USH2A-204ENST00000481786 TXNDC2Q86VQ3 553 aa4.2□□□□□ -1.74
USH2A-204ENST00000481786 WDR89Q96FK6 387 aaPredicted RBP4.2□□□□□ -1.74
USH2A-204ENST00000481786 DIRC2Q96SL1 478 aa4.2□□□□□ -1.74
USH2A-204ENST00000481786 WDR18Q9BV38 432 aa4.2□□□□□ -1.74
USH2A-204ENST00000481786 EGFL7Q9UHF1 273 aa4.2□□□□□ -1.74
USH2A-204ENST00000481786 NESP48681 1621 aa4.2□□□□□ -1.74
USH2A-204ENST00000481786 NFIBO00712 420 aa4.19□□□□□ -1.74
USH2A-204ENST00000481786 FZD6O60353 706 aa4.19□□□□□ -1.74
USH2A-204ENST00000481786 AOC2O75106 756 aa4.19□□□□□ -1.74
USH2A-204ENST00000481786 RPLP1P05386 114 aaKnown RBP4.19□□□□□ -1.74
USH2A-204ENST00000481786 CEACAM5P06731 702 aa4.19□□□□□ -1.74
USH2A-204ENST00000481786 SERPINB4P48594 390 aa4.19□□□□□ -1.74
USH2A-204ENST00000481786 PCDH1Q08174 1060 aa4.19□□□□□ -1.74
USH2A-204ENST00000481786 MPZL3Q6UWV2 235 aa4.19□□□□□ -1.74
USH2A-204ENST00000481786 FOXD3Q9UJU5 478 aaPredicted RBP4.19□□□□□ -1.74
USH2A-204ENST00000481786 POLIQ9UNA4 740 aa4.19□□□□□ -1.74
USH2A-204ENST00000481786 RIMBP3CA6NJZ7 1639 aa4.19□□□□□ -1.74
USH2A-204ENST00000481786 RIMBP3BA6NNM3 1639 aa4.19□□□□□ -1.74
USH2A-204ENST00000481786 RIMBP3Q9UFD9 1639 aa4.19□□□□□ -1.74
USH2A-204ENST00000481786 TMEM265A0A087WTH1 108 aa4.18□□□□□ -1.74
USH2A-204ENST00000481786 RBAK-RBAKDNI3L0D1 243 aa4.18□□□□□ -1.74
USH2A-204ENST00000481786 POLR3DP05423 398 aaPredicted RBP4.18□□□□□ -1.74
USH2A-204ENST00000481786 GLI1P08151 1106 aa4.18□□□□□ -1.74
USH2A-204ENST00000481786 PCSK2P16519 638 aa4.18□□□□□ -1.74
USH2A-204ENST00000481786 ZP2Q05996 745 aa4.18□□□□□ -1.74
USH2A-204ENST00000481786 CYB5RLQ6IPT4 315 aa4.18□□□□□ -1.74
USH2A-204ENST00000481786 ATG14Q6ZNE5 492 aa4.18□□□□□ -1.74
USH2A-204ENST00000481786 GGNQ86UU5 652 aa4.18□□□□□ -1.74
USH2A-204ENST00000481786 RELTQ969Z4 430 aa4.18□□□□□ -1.74
USH2A-204ENST00000481786 HEXIM2Q96MH2 286 aaKnown RBP4.18□□□□□ -1.74
USH2A-204ENST00000481786 NSUN3Q9H649 340 aaKnown RBP4.18□□□□□ -1.74
USH2A-204ENST00000481786 CD320Q9NPF0 282 aa4.18□□□□□ -1.74
USH2A-204ENST00000481786 CCDC87Q9NVE4 849 aa4.18□□□□□ -1.74
USH2A-204ENST00000481786 ARHGEF11O15085 1522 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 A0A096LPE4 126 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 A0A0G2JLL6 359 aaPredicted RBP4.17□□□□□ -1.74
USH2A-204ENST00000481786 A0A1W2PPZ6 126 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 H3BRB1 525 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 TMPRSS2O15393 492 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 CYP11A1P05108 521 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 GRIA4P48058 902 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 ARHGAP4P98171 946 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 IKZF1Q13422 519 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 AAMPQ13685 434 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 KCNA10Q16322 511 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 DUSP23Q9BVJ7 150 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 TNKS2Q9H2K2 1166 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 TUT1Q9H6E5 874 aaKnown RBP4.17□□□□□ -1.74
USH2A-204ENST00000481786 C19orf73Q9NVV2 129 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 PDS5BQ9NTI5 1447 aa4.17□□□□□ -1.74
USH2A-204ENST00000481786 DCAF1Q9Y4B6 1507 aa4.16□□□□□ -1.74
USH2A-204ENST00000481786 SMARCA2P51531 1590 aa4.16□□□□□ -1.74
USH2A-204ENST00000481786 FOXD2O60548 495 aaPredicted RBP4.16□□□□□ -1.74
USH2A-204ENST00000481786 TNFRSF21O75509 655 aa4.16□□□□□ -1.74
USH2A-204ENST00000481786 LIG1P18858 919 aa4.16□□□□□ -1.74
USH2A-204ENST00000481786 USP5P45974 858 aa4.16□□□□□ -1.74
USH2A-204ENST00000481786 ARHGAP27Q6ZUM4 889 aa4.16□□□□□ -1.74
USH2A-204ENST00000481786 GLYCTKQ8IVS8 523 aa4.16□□□□□ -1.74
USH2A-204ENST00000481786 GJD3Q8N144 294 aa4.16□□□□□ -1.74
USH2A-204ENST00000481786 FBXO15Q8NCQ5 510 aaPredicted RBP4.16□□□□□ -1.74
USH2A-204ENST00000481786 TTC16Q8NEE8 873 aa4.16□□□□□ -1.74
USH2A-204ENST00000481786 KIRREL1Q96J84 757 aa4.16□□□□□ -1.74
USH2A-204ENST00000481786 CSRNP1Q96S65 589 aa4.16□□□□□ -1.74
USH2A-204ENST00000481786 CLEC4MQ9H2X3 399 aaPredicted RBP4.16□□□□□ -1.74
USH2A-204ENST00000481786 LAMC3Q9Y6N6 1575 aa4.15□□□□□ -1.74
USH2A-204ENST00000481786 ETV2O00321 342 aaPredicted RBP4.15□□□□□ -1.75
USH2A-204ENST00000481786 PHACTR2O75167 634 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 BRD1O95696 1058 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 EDN3P14138 238 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 AFMP43652 599 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 EHHADHQ08426 723 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 PDE3AQ14432 1141 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 CIAPIN1Q6FI81 312 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 PMEPA1Q969W9 287 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 FANCD2OSQ96PS1 177 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 CORO1BQ9BR76 489 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 ZC3H12CQ9C0D7 883 aaKnown RBP4.15□□□□□ -1.75
USH2A-204ENST00000481786 IRF2BPLQ9H1B7 796 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 MKNK2Q9HBH9 465 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 DISC1Q9NRI5 854 aa4.15□□□□□ -1.75
USH2A-204ENST00000481786 SMG5Q9UPR3 1016 aaKnown RBP4.15□□□□□ -1.75
USH2A-204ENST00000481786 GNEQ9Y223 722 aaKnown RBP4.15□□□□□ -1.75
USH2A-204ENST00000481786 TMEM253P0C7T8 217 aa4.14□□□□□ -1.75
USH2A-204ENST00000481786 HCLS1P14317 486 aaPredicted RBP4.14□□□□□ -1.75
USH2A-204ENST00000481786 TTLL4Q14679 1199 aa4.14□□□□□ -1.75
USH2A-204ENST00000481786 TMEM67Q5HYA8 995 aa4.14□□□□□ -1.75
USH2A-204ENST00000481786 FAM214BQ7L5A3 538 aa4.14□□□□□ -1.75
USH2A-204ENST00000481786 SPACA3Q8IXA5 215 aa4.14□□□□□ -1.75
USH2A-204ENST00000481786 SMYD4Q8IYR2 804 aaPredicted RBP4.14□□□□□ -1.75
USH2A-204ENST00000481786 TOP6BLQ8N6T0 577 aa4.14□□□□□ -1.75
USH2A-204ENST00000481786 TCF12Q99081 682 aa4.14□□□□□ -1.75
USH2A-204ENST00000481786 PARD6AQ9NPB6 346 aa4.14□□□□□ -1.75
USH2A-204ENST00000481786 BRPF3Q9ULD4 1205 aa4.14□□□□□ -1.75
USH2A-204ENST00000481786 SOWAHDA6NJG2 315 aa4.13□□□□□ -1.75
USH2A-204ENST00000481786 NUAK1O60285 661 aa4.13□□□□□ -1.75
USH2A-204ENST00000481786 ZNF862O60290 1169 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms