RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 VPS53Q5VIR6 699 aa27.57■■■□□ 2
SHISA4-203ENST00000481699 GIMAP6Q6P9H5 292 aa27.57■■■□□ 2
SHISA4-203ENST00000481699 DSCC1Q9BVC3 393 aa27.57■■■□□ 2
SHISA4-203ENST00000481699 NAPBQ9H115 298 aa27.57■■■□□ 2
SHISA4-203ENST00000481699 FLT1P17948 1338 aa27.57■■■□□ 2
SHISA4-203ENST00000481699 PITPNM2Q9BZ72 1349 aa27.57■■■□□ 2
SHISA4-203ENST00000481699 GSG1L2A8MUP6 293 aa27.56■■■□□ 2
SHISA4-203ENST00000481699 ENTPD3O75355 529 aa27.56■■■□□ 2
SHISA4-203ENST00000481699 SULF1Q8IWU6 871 aa27.56■■■□□ 2
SHISA4-203ENST00000481699 ZSCAN29Q8IWY8 852 aaPredicted RBP27.56■■■□□ 2
SHISA4-203ENST00000481699 MCM9Q9NXL9 1143 aa27.56■■■□□ 2
SHISA4-203ENST00000481699 NPM3O75607 178 aaKnown RBP27.55■■■□□ 2
SHISA4-203ENST00000481699 FAM83AQ86UY5 434 aa27.55■■■□□ 2
SHISA4-203ENST00000481699 LDHDQ86WU2 507 aa27.55■■■□□ 2
SHISA4-203ENST00000481699 IFNL3Q8IZI9 196 aa27.55■■■□□ 2
SHISA4-203ENST00000481699 DCP1AQ9NPI6 582 aaPredicted RBP27.55■■■□□ 2
SHISA4-203ENST00000481699 SAP30BPQ9UHR5 308 aaKnown RBP27.55■■■□□ 2
SHISA4-203ENST00000481699 CTNNA3Q9UI47 895 aa27.55■■■□□ 2
SHISA4-203ENST00000481699 POLR3DP05423 398 aaPredicted RBP27.54■■■□□ 2
SHISA4-203ENST00000481699 FAM151AQ8WW52 585 aa27.54■■■□□ 2
SHISA4-203ENST00000481699 OSBPL5Q9H0X9 879 aaPredicted RBP27.54■■■□□ 2
SHISA4-203ENST00000481699 DDX4Q9NQI0 724 aaKnown RBP27.54■■■□□ 2
SHISA4-203ENST00000481699 FAM198AQ9UFP1 575 aa27.54■■■□□ 2
SHISA4-203ENST00000481699 U3KPZ7 1027 aaPredicted RBP27.54■■■□□ 2
SHISA4-203ENST00000481699 RASA3Q14644 834 aa27.53■■■□□ 2
SHISA4-203ENST00000481699 DNAJC5GQ8N7S2 189 aa27.53■■■□□ 2
SHISA4-203ENST00000481699 HLA-DOAP06340 250 aa27.52■■■□□ 2
SHISA4-203ENST00000481699 PTH1RQ03431 593 aa27.52■■■□□ 2
SHISA4-203ENST00000481699 ALX1Q15699 326 aa27.52■■■□□ 2
SHISA4-203ENST00000481699 KRT26Q7Z3Y9 468 aa27.52■■■□□ 2
SHISA4-203ENST00000481699 LSG1Q9H089 658 aaKnown RBP27.52■■■□□ 2
SHISA4-203ENST00000481699 DEFB129Q9H1M3 183 aa27.52■■■□□ 2
SHISA4-203ENST00000481699 EPB41L4AQ9HCS5 686 aaPredicted RBP27.52■■■□□ 2
SHISA4-203ENST00000481699 ARPP21Q9UBL0 812 aaPredicted RBP27.52■■■□□ 2
SHISA4-203ENST00000481699 PPP2R3BQ9Y5P8 575 aa27.52■■■□□ 2
SHISA4-203ENST00000481699 ECM29Q5VYK3 1845 aa27.51■■□□□ 1.99
SHISA4-203ENST00000481699 TOMM70O94826 608 aa27.51■■□□□ 1.99
SHISA4-203ENST00000481699 DHX36Q9H2U1 1008 aaKnown RBP27.51■■□□□ 1.99
SHISA4-203ENST00000481699 PGAP2Q9UHJ9 254 aa27.51■■□□□ 1.99
SHISA4-203ENST00000481699 SCAF8Q9UPN6 1271 aaKnown RBP27.51■■□□□ 1.99
SHISA4-203ENST00000481699 FGAP02671 866 aa27.5■■□□□ 1.99
SHISA4-203ENST00000481699 TTC6Q86TZ1 520 aa27.5■■□□□ 1.99
SHISA4-203ENST00000481699 UPF2Q9HAU5 1272 aaKnown RBP27.5■■□□□ 1.99
SHISA4-203ENST00000481699 CNTNAP1P78357 1384 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 ZMYM6O95789 1325 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 MINDY4BA8MYZ0 360 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 USP17L12C9JPN9 530 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 USP17L21D6R901 530 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 HTRA3P83110 453 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 SLC4A8Q2Y0W8 1093 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 CDC37L1Q7L3B6 337 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 MAP4K1Q92918 833 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 TRIM34Q9BYJ4 488 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 TMEM39BQ9GZU3 492 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 MKRN1Q9UHC7 482 aaKnown RBP27.49■■□□□ 1.99
SHISA4-203ENST00000481699 PALD1Q9ULE6 856 aa27.49■■□□□ 1.99
SHISA4-203ENST00000481699 RBM8AQ9Y5S9 174 aaKnown RBP27.49■■□□□ 1.99
SHISA4-203ENST00000481699 FOXP2O15409 715 aa27.48■■□□□ 1.99
SHISA4-203ENST00000481699 SLC3A2P08195 630 aaKnown RBP27.48■■□□□ 1.99
SHISA4-203ENST00000481699 POTEIP0CG38 1075 aa27.48■■□□□ 1.99
SHISA4-203ENST00000481699 POTEJP0CG39 1038 aa27.48■■□□□ 1.99
SHISA4-203ENST00000481699 MCCP23508 829 aa27.48■■□□□ 1.99
SHISA4-203ENST00000481699 IMMTQ16891 758 aaKnown RBP27.48■■□□□ 1.99
SHISA4-203ENST00000481699 CTR9Q6PD62 1173 aa27.48■■□□□ 1.99
SHISA4-203ENST00000481699 USP48Q86UV5 1035 aa27.48■■□□□ 1.99
SHISA4-203ENST00000481699 ZFPM1Q8IX07 1006 aa27.48■■□□□ 1.99
SHISA4-203ENST00000481699 SBK1Q52WX2 424 aa27.47■■□□□ 1.99
SHISA4-203ENST00000481699 MAP1SQ66K74 1059 aaPredicted RBP27.47■■□□□ 1.99
SHISA4-203ENST00000481699 HOOK2Q96ED9 719 aa27.47■■□□□ 1.99
SHISA4-203ENST00000481699 CSRNP1Q96S65 589 aa27.47■■□□□ 1.99
SHISA4-203ENST00000481699 NAV1Q8NEY1 1877 aa27.47■■□□□ 1.99
SHISA4-203ENST00000481699 COL2A1P02458 1487 aaPredicted RBP27.46■■□□□ 1.99
SHISA4-203ENST00000481699 ADM5C9JUS6 153 aa27.46■■□□□ 1.99
SHISA4-203ENST00000481699 ZNF213O14771 459 aa27.46■■□□□ 1.99
SHISA4-203ENST00000481699 EPB41L2O43491 1005 aaKnown RBP27.46■■□□□ 1.99
SHISA4-203ENST00000481699 RNF20Q5VTR2 975 aa27.46■■□□□ 1.99
SHISA4-203ENST00000481699 CHADLQ6NUI6 762 aa27.46■■□□□ 1.99
SHISA4-203ENST00000481699 CRACR2BQ8N4Y2 399 aaPredicted RBP27.46■■□□□ 1.99
SHISA4-203ENST00000481699 BACH2Q9BYV9 841 aa27.46■■□□□ 1.99
SHISA4-203ENST00000481699 SUPT20HL1Q3ZLR7 823 aa27.45■■□□□ 1.98
SHISA4-203ENST00000481699 GLIS2Q9BZE0 524 aaPredicted RBP27.45■■□□□ 1.98
SHISA4-203ENST00000481699 PI4KBQ9UBF8 816 aa27.45■■□□□ 1.98
SHISA4-203ENST00000481699 ATRNL1Q5VV63 1379 aa27.45■■□□□ 1.98
SHISA4-203ENST00000481699 DDTLA6NHG4 134 aaPredicted RBP27.44■■□□□ 1.98
SHISA4-203ENST00000481699 SEC24BO95487 1268 aa27.44■■□□□ 1.98
SHISA4-203ENST00000481699 CYP2D6P10635 497 aa27.44■■□□□ 1.98
SHISA4-203ENST00000481699 PPARAQ07869 468 aa27.44■■□□□ 1.98
SHISA4-203ENST00000481699 C12orf60Q5U649 245 aa27.44■■□□□ 1.98
SHISA4-203ENST00000481699 FOCADQ5VW36 1801 aa27.44■■□□□ 1.98
SHISA4-203ENST00000481699 CDK5RAP2Q96SN8 1893 aa27.43■■□□□ 1.98
SHISA4-203ENST00000481699 CYP2D7A0A087X1C5 515 aa27.43■■□□□ 1.98
SHISA4-203ENST00000481699 NF2P35240 595 aa27.43■■□□□ 1.98
SHISA4-203ENST00000481699 HAND2P61296 217 aa27.43■■□□□ 1.98
SHISA4-203ENST00000481699 SH3BP5LQ7L8J4 393 aa27.43■■□□□ 1.98
SHISA4-203ENST00000481699 USP26Q9BXU7 913 aa27.43■■□□□ 1.98
SHISA4-203ENST00000481699 CAPN15O75808 1086 aa27.42■■□□□ 1.98
SHISA4-203ENST00000481699 SERPINB13Q9UIV8 391 aa27.42■■□□□ 1.98
SHISA4-203ENST00000481699 ZKSCAN1P17029 563 aaPredicted RBP27.41■■□□□ 1.98
SHISA4-203ENST00000481699 PLCD1P51178 756 aa27.41■■□□□ 1.98
SHISA4-203ENST00000481699 PRAMEF18Q5VWM3 479 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms