RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 GOLIM4O00461 696 aa12.9□□□□□ -0.34
SSBP1-210ENST00000481508 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-210ENST00000481508 ATP5JP18859 108 aa12.9□□□□□ -0.34
SSBP1-210ENST00000481508 BTDP43251 543 aa12.9□□□□□ -0.34
SSBP1-210ENST00000481508 NFIAQ12857 509 aa12.9□□□□□ -0.34
SSBP1-210ENST00000481508 SPTY2D1Q68D10 685 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-210ENST00000481508 B4GALNT3Q6L9W6 998 aa12.9□□□□□ -0.34
SSBP1-210ENST00000481508 GCC1Q96CN9 775 aa12.9□□□□□ -0.34
SSBP1-210ENST00000481508 TMEM39BQ9GZU3 492 aa12.9□□□□□ -0.34
SSBP1-210ENST00000481508 DEFB129Q9H1M3 183 aa12.9□□□□□ -0.34
SSBP1-210ENST00000481508 RWDD1Q9H446 243 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-210ENST00000481508 LRP2BPQ9P2M1 347 aa12.9□□□□□ -0.34
SSBP1-210ENST00000481508 A0A0C4DFX4 3053 aa12.89□□□□□ -0.35
SSBP1-210ENST00000481508 GPR75-ASB3A0A0A6YYF3 556 aa12.89□□□□□ -0.35
SSBP1-210ENST00000481508 MYO1BO43795 1136 aa12.89□□□□□ -0.35
SSBP1-210ENST00000481508 RHBDL3P58872 404 aa12.89□□□□□ -0.35
SSBP1-210ENST00000481508 RASA3Q14644 834 aa12.89□□□□□ -0.35
SSBP1-210ENST00000481508 NBPF12Q5TAG4 269 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-210ENST00000481508 FAM163AQ96GL9 167 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-210ENST00000481508 TEPSINQ96N21 525 aa12.89□□□□□ -0.35
SSBP1-210ENST00000481508 HAUS7Q99871 368 aa12.89□□□□□ -0.35
SSBP1-210ENST00000481508 LNPKQ9C0E8 428 aa12.89□□□□□ -0.35
SSBP1-210ENST00000481508 DDX4Q9NQI0 724 aaKnown RBP12.89□□□□□ -0.35
SSBP1-210ENST00000481508 ECHDC1Q9NTX5 307 aa12.89□□□□□ -0.35
SSBP1-210ENST00000481508 USP40Q9NVE5 1235 aa12.89□□□□□ -0.35
SSBP1-210ENST00000481508 COL6A3P12111 3177 aa12.89□□□□□ -0.35
SSBP1-210ENST00000481508 DDX60LQ5H9U9 1706 aaKnown RBP12.88□□□□□ -0.35
SSBP1-210ENST00000481508 MYH1P12882 1939 aa12.88□□□□□ -0.35
SSBP1-210ENST00000481508 IDH1O75874 414 aaKnown RBP12.88□□□□□ -0.35
SSBP1-210ENST00000481508 ZFPM1Q8IX07 1006 aa12.88□□□□□ -0.35
SSBP1-210ENST00000481508 PI4K2BQ8TCG2 481 aa12.88□□□□□ -0.35
SSBP1-210ENST00000481508 GBA2Q9HCG7 927 aaPredicted RBP12.88□□□□□ -0.35
SSBP1-210ENST00000481508 PAG1Q9NWQ8 432 aa12.88□□□□□ -0.35
SSBP1-210ENST00000481508 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
SSBP1-210ENST00000481508 NAV1Q8NEY1 1877 aa12.87□□□□□ -0.35
SSBP1-210ENST00000481508 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-210ENST00000481508 MAP4K4O95819 1239 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-210ENST00000481508 CYP7A1P22680 504 aa12.87□□□□□ -0.35
SSBP1-210ENST00000481508 FXR1P51114 621 aaKnown RBP eCLIP12.87□□□□□ -0.35
SSBP1-210ENST00000481508 DYNLL1P63167 89 aaKnown RBP12.87□□□□□ -0.35
SSBP1-210ENST00000481508 NUCB1Q02818 461 aa12.87□□□□□ -0.35
SSBP1-210ENST00000481508 TCP10Q12799 353 aa12.87□□□□□ -0.35
SSBP1-210ENST00000481508 PRKG1Q13976 671 aa12.87□□□□□ -0.35
SSBP1-210ENST00000481508 NAA16Q6N069 864 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-210ENST00000481508 MAGEB6Q8N7X4 407 aa12.87□□□□□ -0.35
SSBP1-210ENST00000481508 SH3RF3Q8TEJ3 882 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-210ENST00000481508 PHF12Q96QT6 1004 aa12.87□□□□□ -0.35
SSBP1-210ENST00000481508 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
SSBP1-210ENST00000481508 TCRBV5S4A2TA0A5A2 114 aa12.86□□□□□ -0.35
SSBP1-210ENST00000481508 SLURP2P0DP57 97 aa12.86□□□□□ -0.35
SSBP1-210ENST00000481508 PDE6AP16499 860 aa12.86□□□□□ -0.35
SSBP1-210ENST00000481508 MX1P20591 662 aa12.86□□□□□ -0.35
SSBP1-210ENST00000481508 RGS3P49796 1198 aa12.86□□□□□ -0.35
SSBP1-210ENST00000481508 GSTO1P78417 241 aa12.86□□□□□ -0.35
SSBP1-210ENST00000481508 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
SSBP1-210ENST00000481508 AATFQ9NY61 560 aaKnown RBP eCLIP12.86□□□□□ -0.35
SSBP1-210ENST00000481508 PPP2R3BQ9Y5P8 575 aa12.86□□□□□ -0.35
SSBP1-210ENST00000481508 BAZ2AQ9UIF9 1905 aaKnown RBP12.86□□□□□ -0.35
SSBP1-210ENST00000481508 UBE2Q2LH0YL09 131 aa12.85□□□□□ -0.35
SSBP1-210ENST00000481508 PDE4AP27815 886 aa12.85□□□□□ -0.35
SSBP1-210ENST00000481508 CHD1LQ86WJ1 897 aa12.85□□□□□ -0.35
SSBP1-210ENST00000481508 MIGA1Q8NAN2 632 aa12.85□□□□□ -0.35
SSBP1-210ENST00000481508 IDI2Q9BXS1 227 aa12.85□□□□□ -0.35
SSBP1-210ENST00000481508 TTC41PQ6P2S7 1318 aa12.85□□□□□ -0.35
SSBP1-210ENST00000481508 ZNF532Q9HCE3 1301 aa12.85□□□□□ -0.35
SSBP1-210ENST00000481508 LAMB1P07942 1786 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 ATRNL1Q5VV63 1379 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 RPAP1Q9BWH6 1393 aaPredicted RBP12.84□□□□□ -0.35
SSBP1-210ENST00000481508 TRPA1O75762 1119 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 LDHCP07864 332 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 ADD2P35612 726 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 PDE1AP54750 535 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 HUNKP57058 714 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 MAP3K12Q12852 859 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 PICALMQ13492 652 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 TNFAIP1Q13829 316 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
SSBP1-210ENST00000481508 FKBP1CQ5VVH2 108 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 FAM83AQ86UY5 434 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 PLEKHM2Q8IWE5 1019 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 SLF2Q8IX21 1173 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 FAM151AQ8WW52 585 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 TMOD2Q9NZR1 351 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 STAP2Q9UGK3 403 aa12.84□□□□□ -0.35
SSBP1-210ENST00000481508 RANBP2P49792 3224 aaKnown RBP12.84□□□□□ -0.35
SSBP1-210ENST00000481508 ATAD5Q96QE3 1844 aa12.83□□□□□ -0.35
SSBP1-210ENST00000481508 DDTLA6NHG4 134 aaPredicted RBP12.83□□□□□ -0.36
SSBP1-210ENST00000481508 FAM155AB1AL88 458 aaPredicted RBP12.83□□□□□ -0.36
SSBP1-210ENST00000481508 USP2O75604 605 aaPredicted RBP12.83□□□□□ -0.36
SSBP1-210ENST00000481508 TNNI2P48788 182 aa12.83□□□□□ -0.36
SSBP1-210ENST00000481508 PPP4CP60510 307 aa12.83□□□□□ -0.36
SSBP1-210ENST00000481508 NOGQ13253 232 aa12.83□□□□□ -0.36
SSBP1-210ENST00000481508 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
SSBP1-210ENST00000481508 SKAP1Q86WV1 359 aa12.83□□□□□ -0.36
SSBP1-210ENST00000481508 TEX11Q8IYF3 940 aa12.83□□□□□ -0.36
SSBP1-210ENST00000481508 C2orf69Q8N8R5 385 aa12.83□□□□□ -0.36
SSBP1-210ENST00000481508 GPATCH3Q96I76 525 aa12.83□□□□□ -0.36
SSBP1-210ENST00000481508 HHIPL1Q96JK4 782 aa12.83□□□□□ -0.36
SSBP1-210ENST00000481508 RIOK1Q9BRS2 568 aaKnown RBP12.83□□□□□ -0.36
SSBP1-210ENST00000481508 ANGEL1Q9UNK9 670 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms