RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 BEND3Q5T5X7 828 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 ANGEL2Q5VTE6 544 aaKnown RBP5.22□□□□□ -1.57
VPS13D-208ENST00000481484 USP48Q86UV5 1035 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 MTMR14Q8NCE2 650 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 ABHD8Q96I13 439 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 CCDC85AQ96PX6 553 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-208ENST00000481484 SRCIN1Q9C0H9 1055 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 HDAC5Q9UQL6 1122 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 UTYO14607 1347 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 MROH5Q6ZUA9 1318 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 CENPFP49454 3210 aa5.21□□□□□ -1.57
VPS13D-208ENST00000481484 AK9Q5TCS8 1911 aa5.21□□□□□ -1.57
VPS13D-208ENST00000481484 MYH2Q9UKX2 1941 aa5.21□□□□□ -1.57
VPS13D-208ENST00000481484 SHTN1A0MZ66 631 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 FAM155AB1AL88 458 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-208ENST00000481484 AOC2O75106 756 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 ALDH1A1P00352 501 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 EGFRP00533 1210 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 IL1R1P14778 569 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 SSTR3P32745 418 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-208ENST00000481484 UBE4AQ14139 1066 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 SCARF1Q14162 830 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 LIAT1Q6ZQX7 453 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 G2E3Q7L622 706 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 ARMC9Q7Z3E5 817 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 RASAL3Q86YV0 1011 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 TBC1D22AQ8WUA7 517 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 CFHR5Q9BXR6 569 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 C9orf78Q9NZ63 289 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-208ENST00000481484 CHMP3Q9Y3E7 222 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 PTPRFP10586 1907 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 FAM205AQ6ZU69 1335 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 IRS2Q9Y4H2 1338 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 SSC5DA1L4H1 1573 aa5.21□□□□□ -1.58
VPS13D-208ENST00000481484 DOCK1Q14185 1865 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 WNT10BO00744 389 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 TRIM66O15016 1216 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 HOXA2O43364 376 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 GFRA3O60609 400 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 ZBTB48P10074 688 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-208ENST00000481484 FMR1Q06787 632 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS13D-208ENST00000481484 DLGAP5Q15398 846 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 PKN2Q16513 984 aaKnown RBP5.2□□□□□ -1.58
VPS13D-208ENST00000481484 MAP3K11Q16584 847 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 Q3C1V9 767 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 ALDH1L2Q3SY69 923 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 RABL6Q3YEC7 729 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-208ENST00000481484 MSS51Q4VC12 460 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 CCDC184Q52MB2 194 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 PLA2G2CQ5R387 149 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 SPRYD7Q5W111 196 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 TTLL5Q6EMB2 1281 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 LDHAL6AQ6ZMR3 332 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 RNF19BQ6ZMZ0 732 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 HOOK2Q96ED9 719 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 ZBED3Q96IU2 234 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-208ENST00000481484 CD209Q9NNX6 404 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 CNNM1Q9NRU3 951 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 SERPINA10Q9UK55 444 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 SUGT1Q9Y2Z0 365 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 FOCADQ5VW36 1801 aa5.2□□□□□ -1.58
VPS13D-208ENST00000481484 NRG2O14511 850 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-208ENST00000481484 PPP1R12BO60237 982 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-208ENST00000481484 SASH1O94885 1247 aa5.19□□□□□ -1.58
VPS13D-208ENST00000481484 IREB2P48200 963 aaKnown RBP5.19□□□□□ -1.58
VPS13D-208ENST00000481484 TNNI2P48788 182 aa5.19□□□□□ -1.58
VPS13D-208ENST00000481484 GTF2IP78347 998 aa5.19□□□□□ -1.58
VPS13D-208ENST00000481484 FOXO4P98177 505 aa5.19□□□□□ -1.58
VPS13D-208ENST00000481484 HDLBPQ00341 1268 aaKnown RBP5.19□□□□□ -1.58
VPS13D-208ENST00000481484 TTLL12Q14166 644 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-208ENST00000481484 PUM3Q15397 648 aaKnown RBP5.19□□□□□ -1.58
VPS13D-208ENST00000481484 SUPT20HL1Q3ZLR7 823 aa5.19□□□□□ -1.58
VPS13D-208ENST00000481484 LMBR1LQ6UX01 489 aa5.19□□□□□ -1.58
VPS13D-208ENST00000481484 CTU1Q7Z7A3 348 aaKnown RBP5.19□□□□□ -1.58
VPS13D-208ENST00000481484 ZNF598Q86UK7 904 aaKnown RBP5.19□□□□□ -1.58
VPS13D-208ENST00000481484 VPS37DQ86XT2 251 aa5.19□□□□□ -1.58
VPS13D-208ENST00000481484 KIAA0825Q8IV33 1275 aa5.19□□□□□ -1.58
VPS13D-208ENST00000481484 FAM9BQ8IZU0 186 aa5.19□□□□□ -1.58
VPS13D-208ENST00000481484 KCNQ5Q9NR82 932 aa5.19□□□□□ -1.58
VPS13D-208ENST00000481484 TMOD2Q9NZR1 351 aa5.19□□□□□ -1.58
VPS13D-208ENST00000481484 ATAD5Q96QE3 1844 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 MANSC4A6NHS7 340 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-208ENST00000481484 F6X3S4 739 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 CCER2I3L3R5 266 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 KLRK1P26718 216 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 RGS19P49795 217 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 MMP16P51512 607 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 INHBEP58166 350 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 KIF23Q02241 960 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-208ENST00000481484 DGKZQ13574 1117 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 NBPF9Q3BBW0 867 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 CAVIN4Q5BKX8 364 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 MFSD14BQ5SR56 506 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 FKBP1CQ5VVH2 108 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 OTUD7BQ6GQQ9 843 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 SLC4A10Q6U841 1118 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 TXNRD3Q86VQ6 643 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 JARID2Q92833 1246 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-208ENST00000481484 HLA-CQ95604 372 aa5.18□□□□□ -1.58
VPS13D-208ENST00000481484 USB1Q9BQ65 265 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms