RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 USP27XA6NNY8 438 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 B4E1Z4 1266 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 LINC00301Q8NCQ3 95 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 FBXO18Q8NFZ0 1043 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 FAM71BQ8TC56 605 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 OSBPL5Q9H0X9 879 aaPredicted RBP13.02□□□□□ -0.33
DDX39B-219ENST00000481456 YEATS2Q9ULM3 1422 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 NRXN1Q9ULB1 1477 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 GPAA1O43292 621 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 VAV2P52735 878 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 HNRNPH2P55795 449 aaKnown RBP13.02□□□□□ -0.33
DDX39B-219ENST00000481456 TMEM266Q2M3C6 531 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 B4GALNT4Q76KP1 1039 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 SRGAP1Q7Z6B7 1085 aa13.02□□□□□ -0.33
DDX39B-219ENST00000481456 SEC63Q9UGP8 760 aaKnown RBP13.02□□□□□ -0.33
DDX39B-219ENST00000481456 ADGRB2O60241 1585 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 IDEP14735 1019 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 CAVIN4Q5BKX8 364 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 WWC2Q6AWC2 1192 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 VPS16Q9H269 839 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 MED4Q9NPJ6 270 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 GPTP24298 496 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 LONRF2Q1L5Z9 754 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 KRT28Q7Z3Y7 464 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 EXOC4Q96A65 974 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 TEX13AQ9BXU3 409 aaPredicted RBP13.01□□□□□ -0.33
DDX39B-219ENST00000481456 PDE11AQ9HCR9 933 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 ARHGEF40Q8TER5 1519 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 BICDL2A1A5D9 508 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 CEBPAP49715 358 aaPredicted RBP13.01□□□□□ -0.33
DDX39B-219ENST00000481456 NBPF6Q5VWK0 638 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 ATRIPQ8WXE1 791 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 PHKBQ93100 1093 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 NBPF4Q96M43 638 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 ALDH8A1Q9H2A2 487 aaPredicted RBP13.01□□□□□ -0.33
DDX39B-219ENST00000481456 USP32Q8NFA0 1604 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 CALM1P0DP23 149 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 CALM2P0DP24 149 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 CALM3P0DP25 149 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 SERTAD1Q9UHV2 236 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 USP6P35125 1406 aa13.01□□□□□ -0.33
DDX39B-219ENST00000481456 SLC39A14Q15043 492 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 RPGRIP1Q96KN7 1286 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 ACTN2P35609 894 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 CCDC40Q4G0X9 1142 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 VSTM4Q8IW00 320 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 BPIFA3Q9BQP9 254 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 COPRSQ9NQ92 184 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 METP08581 1390 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 CCDC151A5D8V7 595 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 GOLGA6BA6NDN3 693 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 PPP6R2O75170 966 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 CDC23Q9UJX2 597 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 RRP15Q9Y3B9 282 aaKnown RBP13□□□□□ -0.33
DDX39B-219ENST00000481456 PAK1Q13153 545 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 CCDC121Q6ZUS5 278 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 DYDC1Q8WWB3 177 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 JAKMIP2Q96AA8 810 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 XAGE2Q96GT9 111 aa13□□□□□ -0.33
DDX39B-219ENST00000481456 DBNLQ9UJU6 430 aaKnown RBP13□□□□□ -0.33
DDX39B-219ENST00000481456 MYOM1P52179 1685 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 ZMYM6O95789 1325 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 ZEB2O60315 1214 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 INPP5BP32019 993 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 ENOX2Q16206 610 aaKnown RBP12.99□□□□□ -0.33
DDX39B-219ENST00000481456 IFI16Q16666 785 aaKnown RBP12.99□□□□□ -0.33
DDX39B-219ENST00000481456 CCDC43Q96MW1 224 aaKnown RBP12.99□□□□□ -0.33
DDX39B-219ENST00000481456 PRDM4Q9UKN5 801 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 MACROD2A1Z1Q3 448 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 VWA3AA6NCI4 1184 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 KRT9P35527 623 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 MAP2K1Q02750 393 aaPredicted RBP12.99□□□□□ -0.33
DDX39B-219ENST00000481456 ARFGAP2Q8N6H7 521 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 DCAF5Q96JK2 942 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 PARD6BQ9BYG5 372 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 SEPT11Q9NVA2 429 aaKnown RBP12.99□□□□□ -0.33
DDX39B-219ENST00000481456 PPRC1Q5VV67 1664 aaKnown RBP12.99□□□□□ -0.33
DDX39B-219ENST00000481456 ZC3H13Q5T200 1668 aaKnown RBP12.99□□□□□ -0.33
DDX39B-219ENST00000481456 PLCD1P51178 756 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 DHX40Q8IX18 779 aaKnown RBP12.99□□□□□ -0.33
DDX39B-219ENST00000481456 SLF1Q9BQI6 1058 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 CFAP58Q5T655 872 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 GOLPH3LQ9H4A5 285 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 KAT14Q9H8E8 782 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 MKNK2Q9HBH9 465 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 ZNF287Q9HBT7 754 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 GOPCQ9HD26 462 aa12.99□□□□□ -0.33
DDX39B-219ENST00000481456 GCOM1H8Y6P7 765 aaPredicted RBP12.98□□□□□ -0.33
DDX39B-219ENST00000481456 MYZAPP0CAP1 466 aa12.98□□□□□ -0.33
DDX39B-219ENST00000481456 LRRC27Q9C0I9 530 aa12.98□□□□□ -0.33
DDX39B-219ENST00000481456 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
DDX39B-219ENST00000481456 TMCO5BA8MYB1 307 aa12.98□□□□□ -0.33
DDX39B-219ENST00000481456 CHD1O14646 1710 aa12.98□□□□□ -0.33
DDX39B-219ENST00000481456 NEURL4Q96JN8 1562 aa12.98□□□□□ -0.33
DDX39B-219ENST00000481456 GCP02774 474 aa12.98□□□□□ -0.33
DDX39B-219ENST00000481456 GOLGA8FQ08AF8 430 aa12.98□□□□□ -0.33
DDX39B-219ENST00000481456 GOLGA8DPQ0D2H9 430 aa12.98□□□□□ -0.33
DDX39B-219ENST00000481456 RBM28Q9NW13 759 aaKnown RBP12.98□□□□□ -0.33
DDX39B-219ENST00000481456 NDUFAB1O14561 156 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms