RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 C2CD5Q86YS7 1000 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 CCDC117Q8IWD4 279 aaPredicted RBP10.66□□□□□ -0.7
GARNL3-216ENST00000481242 SPC25Q9HBM1 224 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 GPCPD1Q9NPB8 672 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 JAG2Q9Y219 1238 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 IKBKGQ9Y6K9 419 aa10.66□□□□□ -0.7
GARNL3-216ENST00000481242 SLC27A2O14975 620 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 KRT86O43790 486 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 BBOX1O75936 387 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 ADCY7P51828 1080 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 VWA3BQ502W6 1294 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 SREK1Q8WXA9 508 aaKnown RBP10.65□□□□□ -0.7
GARNL3-216ENST00000481242 MMRN2Q9H8L6 949 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 GPR108Q9NPR9 543 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 TTF2Q9UNY4 1162 aaKnown RBP10.65□□□□□ -0.7
GARNL3-216ENST00000481242 CNPY2Q9Y2B0 182 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 PAXBP1Q9Y5B6 917 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 COMMD10Q9Y6G5 202 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 ATP2A1O14983 1001 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 MAP2K1Q02750 393 aaPredicted RBP10.65□□□□□ -0.7
GARNL3-216ENST00000481242 TAF12Q16514 161 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 CNNM4Q6P4Q7 775 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 DDX17Q92841 729 aaKnown RBP10.65□□□□□ -0.7
GARNL3-216ENST00000481242 ZNF594Q96JF6 807 aaPredicted RBP10.65□□□□□ -0.7
GARNL3-216ENST00000481242 AZI2Q9H6S1 392 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 JADE2Q9NQC1 790 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 RASAL2Q9UJF2 1139 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 IGSF1Q8N6C5 1336 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 TAF5LO75529 589 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 KIF5AQ12840 1032 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 GPR162Q16538 588 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 FNBP1Q96RU3 617 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 MRVI1Q9Y6F6 885 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 METP08581 1390 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 ERVK-7P63135 1459 aa10.65□□□□□ -0.7
GARNL3-216ENST00000481242 SHTN1A0MZ66 631 aa10.65□□□□□ -0.71
GARNL3-216ENST00000481242 DNM2P50570 870 aa10.65□□□□□ -0.71
GARNL3-216ENST00000481242 AKNAD1Q5T1N1 836 aa10.65□□□□□ -0.71
GARNL3-216ENST00000481242 GIMAP6Q6P9H5 292 aa10.65□□□□□ -0.71
GARNL3-216ENST00000481242 CHST3Q7LGC8 479 aa10.65□□□□□ -0.71
GARNL3-216ENST00000481242 SAMD9LQ8IVG5 1584 aa10.65□□□□□ -0.71
GARNL3-216ENST00000481242 CCDC42Q96M95 316 aa10.65□□□□□ -0.71
GARNL3-216ENST00000481242 CCDC77Q9BR77 488 aa10.65□□□□□ -0.71
GARNL3-216ENST00000481242 ZNF532Q9HCE3 1301 aa10.65□□□□□ -0.71
GARNL3-216ENST00000481242 BCS1LQ9Y276 419 aa10.65□□□□□ -0.71
GARNL3-216ENST00000481242 KDM5CP41229 1560 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 CCT6AP40227 531 aaKnown RBP10.64□□□□□ -0.71
GARNL3-216ENST00000481242 FCHSD1Q86WN1 690 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 EPB41P11171 864 aaKnown RBP10.64□□□□□ -0.71
GARNL3-216ENST00000481242 LMAN1P49257 510 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 GNG11P61952 73 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 GTF2IP78347 998 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 GNPTABQ3T906 1256 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 ANO6Q4KMQ2 910 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 HACE1Q8IYU2 909 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 CCDC17Q96LX7 622 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 USP40Q9NVE5 1235 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 TNNQ9UQP3 1299 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 V9GY48 417 aaPredicted RBP10.64□□□□□ -0.71
GARNL3-216ENST00000481242 ARHGAP31Q2M1Z3 1444 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 ARHGEF35A5YM69 484 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 FAM160A1Q05DH4 1040 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 WDR44Q5JSH3 913 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 KRT27Q7Z3Y8 459 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 PLCD4Q9BRC7 762 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 CCDC113Q9H0I3 377 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 ATP8A2Q9NTI2 1148 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 HECW2Q9P2P5 1572 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 USP6P35125 1406 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 KDM5AP29375 1690 aaKnown RBP10.64□□□□□ -0.71
GARNL3-216ENST00000481242 XDHP47989 1333 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 ISM2Q6H9L7 571 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 IWS1Q96ST2 819 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 SRRTQ9BXP5 876 aaKnown RBP10.64□□□□□ -0.71
GARNL3-216ENST00000481242 COPRSQ9NQ92 184 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 HOMER2Q9NSB8 354 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 WWC3Q9ULE0 1092 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 CLASP1Q7Z460 1538 aa10.64□□□□□ -0.71
GARNL3-216ENST00000481242 ERVV-1B6SEH8 477 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 CUTAO60888 179 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 TUBBP07437 444 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 ZAP70P43403 619 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 STRN3Q13033 797 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 NLRX1Q86UT6 975 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 SMCR8Q8TEV9 937 aaPredicted RBP10.63□□□□□ -0.71
GARNL3-216ENST00000481242 ZNF408Q9H9D4 720 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 ABCC4O15439 1325 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 CIAO1O76071 339 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 CCDC175P0C221 793 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 SYT1P21579 422 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 DNA2P51530 1060 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 OTUD7BQ6GQQ9 843 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 DIS3L2Q8IYB7 885 aaKnown RBP10.63□□□□□ -0.71
GARNL3-216ENST00000481242 KIFAP3Q92845 792 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 LUC7L2Q9Y383 392 aaKnown RBP10.63□□□□□ -0.71
GARNL3-216ENST00000481242 PPM1FP49593 454 aaPredicted RBP10.63□□□□□ -0.71
GARNL3-216ENST00000481242 GALNT17Q6IS24 598 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 TMED8Q6PL24 325 aaPredicted RBP10.63□□□□□ -0.71
GARNL3-216ENST00000481242 CNGA4Q8IV77 575 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 SULF1Q8IWU6 871 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms