RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	TOP6BL	Q8N6T0	577 aa		6.65	□□□□□ -1.34
CCNL1-223	ENST00000481173	TMEM40	Q8WWA1	233 aa		6.65	□□□□□ -1.34
CCNL1-223	ENST00000481173	KCNB2	Q92953	911 aa		6.65	□□□□□ -1.34
CCNL1-223	ENST00000481173	EGFL7	Q9UHF1	273 aa		6.65	□□□□□ -1.34
CCNL1-223	ENST00000481173	ARHGAP4	P98171	946 aa		6.64	□□□□□ -1.35
CCNL1-223	ENST00000481173	PDE3B	Q13370	1112 aa		6.64	□□□□□ -1.35
CCNL1-223	ENST00000481173	GRM2	Q14416	872 aa		6.64	□□□□□ -1.35
CCNL1-223	ENST00000481173	FBLN7	Q53RD9	439 aa		6.64	□□□□□ -1.35
CCNL1-223	ENST00000481173	ISL2	Q96A47	359 aa		6.64	□□□□□ -1.35
CCNL1-223	ENST00000481173	FAM129B	Q96TA1	746 aa		6.64	□□□□□ -1.35
CCNL1-223	ENST00000481173	NIF3L1	Q9GZT8	377 aa		6.64	□□□□□ -1.35
CCNL1-223	ENST00000481173	SSU72	Q9NP77	194 aa	Known RBP	6.64	□□□□□ -1.35
CCNL1-223	ENST00000481173	GPN3	Q9UHW5	284 aa	Predicted RBP	6.64	□□□□□ -1.35
CCNL1-223	ENST00000481173	PCOLCE2	Q9UKZ9	415 aa		6.64	□□□□□ -1.35
CCNL1-223	ENST00000481173	TMEM265	A0A087WTH1	108 aa		6.63	□□□□□ -1.35
CCNL1-223	ENST00000481173	GPR182	O15218	404 aa		6.63	□□□□□ -1.35
CCNL1-223	ENST00000481173	ANGEL2	Q5VTE6	544 aa	Known RBP	6.63	□□□□□ -1.35
CCNL1-223	ENST00000481173	STK35	Q8TDR2	534 aa		6.63	□□□□□ -1.35
CCNL1-223	ENST00000481173	EPS8L3	Q8TE67	593 aa	Known RBP	6.63	□□□□□ -1.35
CCNL1-223	ENST00000481173	SLC38A3	Q99624	504 aa		6.63	□□□□□ -1.35
CCNL1-223	ENST00000481173	MKNK2	Q9HBH9	465 aa		6.63	□□□□□ -1.35
CCNL1-223	ENST00000481173	KRT82	Q9NSB4	513 aa		6.63	□□□□□ -1.35
CCNL1-223	ENST00000481173	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
CCNL1-223	ENST00000481173	TRAK1	Q9UPV9	953 aa		6.63	□□□□□ -1.35
CCNL1-223	ENST00000481173	DTHD1	Q6ZMT9	781 aa		6.62	□□□□□ -1.35
CCNL1-223	ENST00000481173	PDZD3	Q86UT5	571 aa		6.62	□□□□□ -1.35
CCNL1-223	ENST00000481173	TMC1	Q8TDI8	760 aa		6.62	□□□□□ -1.35
CCNL1-223	ENST00000481173	LRRC10B	A6NIK2	292 aa		6.61	□□□□□ -1.35
CCNL1-223	ENST00000481173	FCGRT	P55899	365 aa		6.61	□□□□□ -1.35
CCNL1-223	ENST00000481173	MESP2	Q0VG99	397 aa		6.61	□□□□□ -1.35
CCNL1-223	ENST00000481173	SLC23A3	Q6PIS1	610 aa		6.61	□□□□□ -1.35
CCNL1-223	ENST00000481173	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	6.61	□□□□□ -1.35
CCNL1-223	ENST00000481173	HEXIM2	Q96MH2	286 aa	Known RBP	6.61	□□□□□ -1.35
CCNL1-223	ENST00000481173	DNAJC25	Q9H1X3	360 aa		6.61	□□□□□ -1.35
CCNL1-223	ENST00000481173	IGHA2	P01877	340 aa		6.6	□□□□□ -1.35
CCNL1-223	ENST00000481173	HNRNPU	Q00839	825 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
CCNL1-223	ENST00000481173	PPP2R3A	Q06190	1150 aa		6.6	□□□□□ -1.35
CCNL1-223	ENST00000481173	IKZF1	Q13422	519 aa		6.6	□□□□□ -1.35
CCNL1-223	ENST00000481173	PI16	Q6UXB8	463 aa		6.6	□□□□□ -1.35
CCNL1-223	ENST00000481173	SULF2	Q8IWU5	870 aa		6.6	□□□□□ -1.35
CCNL1-223	ENST00000481173	TNKS2	Q9H2K2	1166 aa		6.6	□□□□□ -1.35
CCNL1-223	ENST00000481173	TMEM39A	Q9NV64	488 aa		6.6	□□□□□ -1.35
CCNL1-223	ENST00000481173	SUPT5H	O00267	1087 aa	Known RBP	6.59	□□□□□ -1.35
CCNL1-223	ENST00000481173	MLANA	Q16655	118 aa		6.59	□□□□□ -1.35
CCNL1-223	ENST00000481173	ZC3H12A	Q5D1E8	599 aa	Known RBP	6.59	□□□□□ -1.35
CCNL1-223	ENST00000481173	MAP1S	Q66K74	1059 aa	Predicted RBP	6.59	□□□□□ -1.35
CCNL1-223	ENST00000481173	ZSWIM9	Q86XI8	627 aa		6.59	□□□□□ -1.35
CCNL1-223	ENST00000481173	FLAD1	Q8NFF5	587 aa		6.59	□□□□□ -1.35
CCNL1-223	ENST00000481173	FAM84A	Q96KN4	292 aa		6.59	□□□□□ -1.35
CCNL1-223	ENST00000481173	ARID3A	Q99856	593 aa		6.59	□□□□□ -1.35
CCNL1-223	ENST00000481173	KRTAP4-2	Q9BYR5	136 aa		6.59	□□□□□ -1.35
CCNL1-223	ENST00000481173	ZNF503-AS2	A6NEH8	195 aa		6.58	□□□□□ -1.36
CCNL1-223	ENST00000481173	ZP2	Q05996	745 aa		6.58	□□□□□ -1.36
CCNL1-223	ENST00000481173	KCNMB1	Q16558	191 aa		6.58	□□□□□ -1.36
CCNL1-223	ENST00000481173	FAM214B	Q7L5A3	538 aa		6.58	□□□□□ -1.36
CCNL1-223	ENST00000481173	RNF214	Q8ND24	703 aa		6.58	□□□□□ -1.36
CCNL1-223	ENST00000481173	GPBAR1	Q8TDU6	330 aa		6.58	□□□□□ -1.36
CCNL1-223	ENST00000481173	CSRNP1	Q96S65	589 aa		6.58	□□□□□ -1.36
CCNL1-223	ENST00000481173	CSAD	Q9Y600	493 aa		6.58	□□□□□ -1.36
CCNL1-223	ENST00000481173	ERVK-24	P63145	666 aa		6.57	□□□□□ -1.36
CCNL1-223	ENST00000481173	PPM1J	Q5JR12	505 aa		6.57	□□□□□ -1.36
CCNL1-223	ENST00000481173	MPRIP	Q6WCQ1	1025 aa		6.57	□□□□□ -1.36
CCNL1-223	ENST00000481173	UBE3D	Q7Z6J8	389 aa		6.57	□□□□□ -1.36
CCNL1-223	ENST00000481173	SPACA3	Q8IXA5	215 aa		6.57	□□□□□ -1.36
CCNL1-223	ENST00000481173	LIN37	Q96GY3	246 aa	Predicted RBP	6.57	□□□□□ -1.36
CCNL1-223	ENST00000481173	CITED4	Q96RK1	184 aa		6.57	□□□□□ -1.36
CCNL1-223	ENST00000481173	SNX11	Q9Y5W9	270 aa		6.57	□□□□□ -1.36
CCNL1-223	ENST00000481173	ARNT	P27540	789 aa		6.56	□□□□□ -1.36
CCNL1-223	ENST00000481173	FYB2	Q5VWT5	728 aa		6.56	□□□□□ -1.36
CCNL1-223	ENST00000481173	B4GALNT3	Q6L9W6	998 aa		6.56	□□□□□ -1.36
CCNL1-223	ENST00000481173	ASB11	Q8WXH4	323 aa		6.56	□□□□□ -1.36
CCNL1-223	ENST00000481173	ACSBG1	Q96GR2	724 aa		6.56	□□□□□ -1.36
CCNL1-223	ENST00000481173	CBX8	Q9HC52	389 aa		6.56	□□□□□ -1.36
CCNL1-223	ENST00000481173	PRDM10	Q9NQV6	1147 aa		6.56	□□□□□ -1.36
CCNL1-223	ENST00000481173	GTF2IRD1	Q9UHL9	959 aa		6.56	□□□□□ -1.36
CCNL1-223	ENST00000481173	CTNND2	Q9UQB3	1225 aa		6.56	□□□□□ -1.36
CCNL1-223	ENST00000481173	AKAP2	Q9Y2D5	859 aa		6.56	□□□□□ -1.36
CCNL1-223	ENST00000481173	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	6.55	□□□□□ -1.36
CCNL1-223	ENST00000481173	NKPD1	Q17RQ9	610 aa		6.55	□□□□□ -1.36
CCNL1-223	ENST00000481173	CILP2	Q8IUL8	1156 aa		6.55	□□□□□ -1.36
CCNL1-223	ENST00000481173	BCO2	Q9BYV7	579 aa		6.55	□□□□□ -1.36
CCNL1-223	ENST00000481173	NLRP2	Q9NX02	1062 aa		6.55	□□□□□ -1.36
CCNL1-223	ENST00000481173	KRTAP9-7	A8MTY7	169 aa		6.54	□□□□□ -1.36
CCNL1-223	ENST00000481173	DCDC2C	A8MYV0	355 aa		6.54	□□□□□ -1.36
CCNL1-223	ENST00000481173	NME2	P22392	152 aa		6.54	□□□□□ -1.36
CCNL1-223	ENST00000481173	NTF4	P34130	210 aa		6.54	□□□□□ -1.36
CCNL1-223	ENST00000481173	GRIN3A	Q8TCU5	1115 aa		6.54	□□□□□ -1.36
CCNL1-223	ENST00000481173	PPP4R2	Q9NY27	417 aa		6.54	□□□□□ -1.36
CCNL1-223	ENST00000481173	FAM53C	Q9NYF3	392 aa		6.54	□□□□□ -1.36
CCNL1-223	ENST00000481173	UST	Q9Y2C2	406 aa		6.54	□□□□□ -1.36
CCNL1-223	ENST00000481173	IGF2BP3	O00425	579 aa	Known RBP eCLIP	6.53	□□□□□ -1.36
CCNL1-223	ENST00000481173	CFP	P27918	469 aa		6.53	□□□□□ -1.36
CCNL1-223	ENST00000481173	RAP1GAP	P47736	663 aa		6.53	□□□□□ -1.36
CCNL1-223	ENST00000481173	ZNF252P-AS1	Q0IIN9	211 aa		6.53	□□□□□ -1.36
CCNL1-223	ENST00000481173	C12orf40	Q86WS4	652 aa		6.53	□□□□□ -1.36
CCNL1-223	ENST00000481173	PICK1	Q9NRD5	415 aa		6.53	□□□□□ -1.36
CCNL1-223	ENST00000481173	PITPNM2	Q9BZ72	1349 aa		6.52	□□□□□ -1.37
CCNL1-223	ENST00000481173	GNAT3	A8MTJ3	354 aa		6.52	□□□□□ -1.37
CCNL1-223	ENST00000481173	EOMES	O95936	686 aa		6.52	□□□□□ -1.37
CCNL1-223	ENST00000481173	ZNF865	P0CJ78	1059 aa	Predicted RBP	6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms