RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 TRAPPC3LQ5T215 181 aa8.06□□□□□ -1.12
UPF3A-207ENST00000481131 FBXO11Q86XK2 927 aa8.06□□□□□ -1.12
UPF3A-207ENST00000481131 FMR1NBQ8N0W7 255 aaPredicted RBP8.06□□□□□ -1.12
UPF3A-207ENST00000481131 DTWD1Q8N5C7 304 aa8.06□□□□□ -1.12
UPF3A-207ENST00000481131 UBASH3BQ8TF42 649 aa8.06□□□□□ -1.12
UPF3A-207ENST00000481131 GFRA2O00451 464 aa8.05□□□□□ -1.12
UPF3A-207ENST00000481131 DLL1O00548 723 aa8.05□□□□□ -1.12
UPF3A-207ENST00000481131 EIF4EBP3O60516 100 aaPredicted RBP8.05□□□□□ -1.12
UPF3A-207ENST00000481131 WISP1O95388 367 aa8.05□□□□□ -1.12
UPF3A-207ENST00000481131 CLCQ05315 142 aa8.05□□□□□ -1.12
UPF3A-207ENST00000481131 INPP5AQ14642 412 aa8.05□□□□□ -1.12
UPF3A-207ENST00000481131 LRFN4Q6PJG9 635 aa8.05□□□□□ -1.12
UPF3A-207ENST00000481131 CCDC81Q6ZN84 652 aa8.05□□□□□ -1.12
UPF3A-207ENST00000481131 CD163Q86VB7 1156 aa8.05□□□□□ -1.12
UPF3A-207ENST00000481131 ZNF408Q9H9D4 720 aa8.05□□□□□ -1.12
UPF3A-207ENST00000481131 PCDHA4Q9UN74 947 aa8.05□□□□□ -1.12
UPF3A-207ENST00000481131 MRVI1Q9Y6F6 885 aa8.05□□□□□ -1.12
UPF3A-207ENST00000481131 BPNT1O95861 308 aa8.04□□□□□ -1.12
UPF3A-207ENST00000481131 SSBP05455 408 aaKnown RBP eCLIP8.04□□□□□ -1.12
UPF3A-207ENST00000481131 ETFBP38117 255 aa8.04□□□□□ -1.12
UPF3A-207ENST00000481131 PDE3AQ14432 1141 aa8.04□□□□□ -1.12
UPF3A-207ENST00000481131 KIF4BQ2VIQ3 1234 aa8.04□□□□□ -1.12
UPF3A-207ENST00000481131 PLPPR2Q96GM1 343 aa8.04□□□□□ -1.12
UPF3A-207ENST00000481131 ACSBG1Q96GR2 724 aa8.04□□□□□ -1.12
UPF3A-207ENST00000481131 SHDQ96IW2 340 aa8.04□□□□□ -1.12
UPF3A-207ENST00000481131 LNPKQ9C0E8 428 aa8.04□□□□□ -1.12
UPF3A-207ENST00000481131 PCDHGC5Q9Y5F6 944 aa8.04□□□□□ -1.12
UPF3A-207ENST00000481131 GRIN3BO60391 1043 aa8.03□□□□□ -1.12
UPF3A-207ENST00000481131 STK10O94804 968 aaKnown RBP8.03□□□□□ -1.12
UPF3A-207ENST00000481131 MCM4P33991 863 aa8.03□□□□□ -1.12
UPF3A-207ENST00000481131 WIPI1Q5MNZ9 446 aaPredicted RBP8.03□□□□□ -1.12
UPF3A-207ENST00000481131 DPH6Q7L8W6 267 aa8.03□□□□□ -1.12
UPF3A-207ENST00000481131 WDR18Q9BV38 432 aa8.03□□□□□ -1.12
UPF3A-207ENST00000481131 SRRTQ9BXP5 876 aaKnown RBP8.03□□□□□ -1.12
UPF3A-207ENST00000481131 STRIP2Q9ULQ0 834 aa8.03□□□□□ -1.12
UPF3A-207ENST00000481131 GK5Q6ZS86 529 aa8.02□□□□□ -1.13
UPF3A-207ENST00000481131 REXO1Q8N1G1 1221 aaKnown RBP8.02□□□□□ -1.13
UPF3A-207ENST00000481131 FAM169BQ8N8A8 192 aa8.02□□□□□ -1.13
UPF3A-207ENST00000481131 EHMT1Q9H9B1 1298 aa8.02□□□□□ -1.13
UPF3A-207ENST00000481131 ZNRF3Q9ULT6 936 aa8.02□□□□□ -1.13
UPF3A-207ENST00000481131 DCDC2CA8MYV0 355 aa8.01□□□□□ -1.13
UPF3A-207ENST00000481131 AOC2O75106 756 aa8.01□□□□□ -1.13
UPF3A-207ENST00000481131 ZNF165P49910 485 aa8.01□□□□□ -1.13
UPF3A-207ENST00000481131 RAC1P63000 192 aa8.01□□□□□ -1.13
UPF3A-207ENST00000481131 ZC3H12AQ5D1E8 599 aaKnown RBP8.01□□□□□ -1.13
UPF3A-207ENST00000481131 CYFIP1Q7L576 1253 aa8.01□□□□□ -1.13
UPF3A-207ENST00000481131 ANAPC16Q96DE5 110 aa8.01□□□□□ -1.13
UPF3A-207ENST00000481131 TMPRSS13Q9BYE2 586 aa8.01□□□□□ -1.13
UPF3A-207ENST00000481131 NOP53Q9NZM5 478 aaKnown RBP8.01□□□□□ -1.13
UPF3A-207ENST00000481131 PCDHB14Q9Y5E9 798 aa8.01□□□□□ -1.13
UPF3A-207ENST00000481131 CORINQ9Y5Q5 1042 aa8.01□□□□□ -1.13
UPF3A-207ENST00000481131 ATE1O95260 518 aa8□□□□□ -1.13
UPF3A-207ENST00000481131 DUOXA2Q1HG44 320 aa8□□□□□ -1.13
UPF3A-207ENST00000481131 KIAA1211Q6ZU35 1233 aa8□□□□□ -1.13
UPF3A-207ENST00000481131 PMFBP1Q8TBY8 1022 aa8□□□□□ -1.13
UPF3A-207ENST00000481131 CPLX3Q8WVH0 158 aa8□□□□□ -1.13
UPF3A-207ENST00000481131 FERD3LQ96RJ6 166 aa8□□□□□ -1.13
UPF3A-207ENST00000481131 HIRIP3Q9BW71 556 aaPredicted RBP8□□□□□ -1.13
UPF3A-207ENST00000481131 CSADQ9Y600 493 aa8□□□□□ -1.13
UPF3A-207ENST00000481131 SNCAIPQ9Y6H5 919 aa8□□□□□ -1.13
UPF3A-207ENST00000481131 PRR36Q9H6K5 1346 aa8□□□□□ -1.13
UPF3A-207ENST00000481131 GIPRP48546 466 aa7.99□□□□□ -1.13
UPF3A-207ENST00000481131 RING1Q06587 406 aa7.99□□□□□ -1.13
UPF3A-207ENST00000481131 HDXQ7Z353 690 aa7.99□□□□□ -1.13
UPF3A-207ENST00000481131 C12orf40Q86WS4 652 aa7.99□□□□□ -1.13
UPF3A-207ENST00000481131 PPP1R9AQ9ULJ8 1098 aa7.99□□□□□ -1.13
UPF3A-207ENST00000481131 K7ELQ4 463 aaPredicted RBP7.98□□□□□ -1.13
UPF3A-207ENST00000481131 PIK3R2O00459 728 aa7.98□□□□□ -1.13
UPF3A-207ENST00000481131 KLF4O43474 513 aa7.98□□□□□ -1.13
UPF3A-207ENST00000481131 HTR3BO95264 441 aa7.98□□□□□ -1.13
UPF3A-207ENST00000481131 EIF6P56537 245 aaKnown RBP7.98□□□□□ -1.13
UPF3A-207ENST00000481131 GRIK4Q16099 956 aa7.98□□□□□ -1.13
UPF3A-207ENST00000481131 CCDC144BQ3MJ40 725 aa7.98□□□□□ -1.13
UPF3A-207ENST00000481131 EXOSC6Q5RKV6 272 aaKnown RBP7.98□□□□□ -1.13
UPF3A-207ENST00000481131 XP32Q5T750 250 aa7.98□□□□□ -1.13
UPF3A-207ENST00000481131 DIEXFQ68CQ4 756 aaKnown RBP7.98□□□□□ -1.13
UPF3A-207ENST00000481131 DCAF11Q8TEB1 546 aa7.98□□□□□ -1.13
UPF3A-207ENST00000481131 ELMO3Q96BJ8 720 aa7.98□□□□□ -1.13
UPF3A-207ENST00000481131 RUSC1Q9BVN2 902 aa7.98□□□□□ -1.13
UPF3A-207ENST00000481131 ANTXR1Q9H6X2 564 aa7.98□□□□□ -1.13
UPF3A-207ENST00000481131 SYNGAP1Q96PV0 1343 aa7.98□□□□□ -1.13
UPF3A-207ENST00000481131 MEGF11A6BM72 1044 aa7.97□□□□□ -1.13
UPF3A-207ENST00000481131 SMAD7O15105 426 aaKnown RBP7.97□□□□□ -1.13
UPF3A-207ENST00000481131 TMPRSS2O15393 492 aa7.97□□□□□ -1.13
UPF3A-207ENST00000481131 DNAJA2O60884 412 aa7.97□□□□□ -1.13
UPF3A-207ENST00000481131 SPATA31C1P0DKV0 1188 aa7.97□□□□□ -1.13
UPF3A-207ENST00000481131 ELNP15502 786 aa7.97□□□□□ -1.13
UPF3A-207ENST00000481131 HP1BP3Q5SSJ5 553 aaPredicted RBP7.97□□□□□ -1.13
UPF3A-207ENST00000481131 FBXW10Q5XX13 1052 aa7.97□□□□□ -1.13
UPF3A-207ENST00000481131 SHISA2Q6UWI4 295 aa7.97□□□□□ -1.13
UPF3A-207ENST00000481131 ANKS3Q6ZW76 656 aa7.97□□□□□ -1.13
UPF3A-207ENST00000481131 ACAD11Q709F0 780 aa7.97□□□□□ -1.13
UPF3A-207ENST00000481131 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.97□□□□□ -1.13
UPF3A-207ENST00000481131 LSRQ86X29 649 aaPredicted RBP7.97□□□□□ -1.13
UPF3A-207ENST00000481131 RBBP8NLQ8NC74 664 aaPredicted RBP7.97□□□□□ -1.13
UPF3A-207ENST00000481131 HNRNPLLQ8WVV9 542 aaKnown RBP7.97□□□□□ -1.13
UPF3A-207ENST00000481131 PRKAG3Q9UGI9 489 aa7.97□□□□□ -1.13
UPF3A-207ENST00000481131 HIF3AQ9Y2N7 669 aa7.97□□□□□ -1.13
UPF3A-207ENST00000481131 FURINP09958 794 aa7.96□□□□□ -1.14
UPF3A-207ENST00000481131 SLFN14P0C7P3 912 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms