RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 LDLRAD1Q5T700 205 aa6.79□□□□□ -1.32
CAPN9-204ENST00000480004 PTCRAQ6ISU1 281 aaPredicted RBP6.79□□□□□ -1.32
CAPN9-204ENST00000480004 USP17L2Q6R6M4 530 aa6.79□□□□□ -1.32
CAPN9-204ENST00000480004 USP17L1Q7RTZ2 530 aa6.79□□□□□ -1.32
CAPN9-204ENST00000480004 OGFOD1Q8N543 542 aa6.79□□□□□ -1.32
CAPN9-204ENST00000480004 FAM174AQ8TBP5 190 aa6.79□□□□□ -1.32
CAPN9-204ENST00000480004 ADAM32Q8TC27 787 aa6.79□□□□□ -1.32
CAPN9-204ENST00000480004 STXBP5LQ9Y2K9 1186 aa6.79□□□□□ -1.32
CAPN9-204ENST00000480004 SH3TC1Q8TE82 1336 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 TRIOBPQ9H2D6 2365 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 PPP1R12BO60237 982 aaPredicted RBP6.78□□□□□ -1.32
CAPN9-204ENST00000480004 SKIP12755 728 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 HCLS1P14317 486 aaPredicted RBP6.78□□□□□ -1.32
CAPN9-204ENST00000480004 CAPN2P17655 700 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 PRMT2P55345 433 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 ELOAQ14241 798 aaKnown RBP6.78□□□□□ -1.32
CAPN9-204ENST00000480004 SH3RF1Q7Z6J0 888 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 PHTF2Q8N3S3 785 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 COL25A1Q9BXS0 654 aaPredicted RBP6.78□□□□□ -1.32
CAPN9-204ENST00000480004 PRO3102Q9H379 93 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 VRTNQ9H8Y1 702 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 KCNQ5Q9NR82 932 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 POLLQ9UGP5 575 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 TRMT112Q9UI30 125 aaKnown RBP6.78□□□□□ -1.32
CAPN9-204ENST00000480004 ANGEL1Q9UNK9 670 aaKnown RBP6.78□□□□□ -1.32
CAPN9-204ENST00000480004 PCDHB9Q9Y5E1 797 aa6.78□□□□□ -1.32
CAPN9-204ENST00000480004 DDX60Q8IY21 1712 aaKnown RBP6.78□□□□□ -1.32
CAPN9-204ENST00000480004 ANKRD36CQ5JPF3 1778 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 PATL2C9JE40 543 aaKnown RBP6.77□□□□□ -1.33
CAPN9-204ENST00000480004 LZTS3O60299 673 aaPredicted RBP6.77□□□□□ -1.33
CAPN9-204ENST00000480004 BRD1O95696 1058 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 GNRH1P01148 92 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 PRKAR2BP31323 418 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 GPSM2P81274 684 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 CRHR2Q13324 411 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 KIF22Q14807 665 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 SLFNL1Q499Z3 407 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 PRAMEF18Q5VWM3 479 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 POTEGQ6S5H5 508 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 MCM10Q7L590 875 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 PODNQ7Z5L7 613 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 ZBTB33Q86T24 672 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 APOBEC3FQ8IUX4 373 aaKnown RBP6.77□□□□□ -1.33
CAPN9-204ENST00000480004 TBC1D16Q8TBP0 767 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 PHACTR3Q96KR7 559 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 NUDCQ9Y266 331 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 PTCH2Q9Y6C5 1203 aa6.77□□□□□ -1.33
CAPN9-204ENST00000480004 MYO3BQ8WXR4 1341 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 WTIPA6NIX2 430 aaPredicted RBP6.76□□□□□ -1.33
CAPN9-204ENST00000480004 IGF2BP3O00425 579 aaKnown RBP eCLIP6.76□□□□□ -1.33
CAPN9-204ENST00000480004 S1PR4O95977 384 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 HSP90B1P14625 803 aaKnown RBP6.76□□□□□ -1.33
CAPN9-204ENST00000480004 RPS8P62241 208 aaKnown RBP6.76□□□□□ -1.33
CAPN9-204ENST00000480004 PRKG1Q13976 671 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 SF3B3Q15393 1217 aaKnown RBP6.76□□□□□ -1.33
CAPN9-204ENST00000480004 MAP3K11Q16584 847 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 NBPF9Q3BBW0 867 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 NLRP10Q86W26 655 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 BPHLQ86WA6 291 aaPredicted RBP6.76□□□□□ -1.33
CAPN9-204ENST00000480004 RNF135Q8IUD6 432 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 WNK4Q96J92 1243 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 CFAP53Q96M91 514 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 GMLQ99445 158 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 ZFYVE28Q9HCC9 887 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 ANKIB1Q9P2G1 1089 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 GGA1Q9UJY5 639 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 FCF1Q9Y324 198 aaKnown RBP6.76□□□□□ -1.33
CAPN9-204ENST00000480004 DUOX1Q9NRD9 1551 aa6.76□□□□□ -1.33
CAPN9-204ENST00000480004 LAMB4A4D0S4 1761 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 KDM3BQ7LBC6 1761 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 FAM196BA6NMK8 535 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 WNT10BO00744 389 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 ZBTB7BO15156 539 aaPredicted RBP6.75□□□□□ -1.33
CAPN9-204ENST00000480004 UFL1O94874 794 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 NEFMP07197 916 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 EIF4A1P60842 406 aaKnown RBP6.75□□□□□ -1.33
CAPN9-204ENST00000480004 KCNA1Q09470 495 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 MAP7D1Q3KQU3 841 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 SUPT20HL1Q3ZLR7 823 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 DEFB123Q8N688 67 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 ZNF511Q8NB15 262 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 CELF1Q92879 486 aaKnown RBP6.75□□□□□ -1.33
CAPN9-204ENST00000480004 PRDM6Q9NQX0 595 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 PPP2R3BQ9Y5P8 575 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 LRRC37AA6NMS7 1700 aa6.75□□□□□ -1.33
CAPN9-204ENST00000480004 MYCP01106 439 aaPredicted RBP6.74□□□□□ -1.33
CAPN9-204ENST00000480004 GJB1P08034 283 aa6.74□□□□□ -1.33
CAPN9-204ENST00000480004 HOXD10P28358 340 aa6.74□□□□□ -1.33
CAPN9-204ENST00000480004 BMP8BP34820 402 aa6.74□□□□□ -1.33
CAPN9-204ENST00000480004 GJA8P48165 433 aa6.74□□□□□ -1.33
CAPN9-204ENST00000480004 IREB2P48200 963 aaKnown RBP6.74□□□□□ -1.33
CAPN9-204ENST00000480004 NCOA4Q13772 614 aa6.74□□□□□ -1.33
CAPN9-204ENST00000480004 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.74□□□□□ -1.33
CAPN9-204ENST00000480004 ANKRD13AQ8IZ07 590 aa6.74□□□□□ -1.33
CAPN9-204ENST00000480004 PLPP7Q8NBV4 271 aa6.74□□□□□ -1.33
CAPN9-204ENST00000480004 BAP1Q92560 729 aa6.74□□□□□ -1.33
CAPN9-204ENST00000480004 MIS18AQ9NYP9 233 aa6.74□□□□□ -1.33
CAPN9-204ENST00000480004 SCAF8Q9UPN6 1271 aaKnown RBP6.74□□□□□ -1.33
CAPN9-204ENST00000480004 COL1A1P02452 1464 aaPredicted RBP6.73□□□□□ -1.33
CAPN9-204ENST00000480004 LAMB2P55268 1798 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms