RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 PHAXQ9H814 394 aaKnown RBP24.09■■□□□ 1.45
SDF4-206ENST00000478938 FAM208AQ9UK61 1670 aaKnown RBP24.09■■□□□ 1.45
SDF4-206ENST00000478938 ATXN2Q99700 1313 aaKnown RBP24.09■■□□□ 1.45
SDF4-206ENST00000478938 EME2A4GXA9 379 aaPredicted RBP24.09■■□□□ 1.45
SDF4-206ENST00000478938 GOLGA6BA6NDN3 693 aa24.09■■□□□ 1.45
SDF4-206ENST00000478938 AKR1B15C9JRZ8 316 aaPredicted RBP24.09■■□□□ 1.45
SDF4-206ENST00000478938 B4GALNT4Q76KP1 1039 aa24.09■■□□□ 1.45
SDF4-206ENST00000478938 SELENOOQ9BVL4 669 aa24.09■■□□□ 1.45
SDF4-206ENST00000478938 MYO6Q9UM54 1294 aa24.09■■□□□ 1.45
SDF4-206ENST00000478938 PDHBP11177 359 aa24.08■■□□□ 1.45
SDF4-206ENST00000478938 PDCLQ13371 301 aa24.08■■□□□ 1.45
SDF4-206ENST00000478938 BOLA2Q9H3K6 86 aa24.08■■□□□ 1.45
SDF4-206ENST00000478938 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.08■■□□□ 1.45
SDF4-206ENST00000478938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.08■■□□□ 1.45
SDF4-206ENST00000478938 ALDH1L1O75891 902 aa24.08■■□□□ 1.45
SDF4-206ENST00000478938 MARCKSP29966 332 aaPredicted RBP24.08■■□□□ 1.45
SDF4-206ENST00000478938 COG3Q96JB2 828 aa24.08■■□□□ 1.45
SDF4-206ENST00000478938 TMCO5BA8MYB1 307 aa24.07■■□□□ 1.44
SDF4-206ENST00000478938 A1BGP04217 495 aa24.07■■□□□ 1.44
SDF4-206ENST00000478938 GRIK3Q13003 919 aa24.07■■□□□ 1.44
SDF4-206ENST00000478938 IDI1Q13907 227 aa24.07■■□□□ 1.44
SDF4-206ENST00000478938 CCDC40Q4G0X9 1142 aa24.07■■□□□ 1.44
SDF4-206ENST00000478938 COL15A1P39059 1388 aa24.07■■□□□ 1.44
SDF4-206ENST00000478938 SYKP43405 635 aa24.07■■□□□ 1.44
SDF4-206ENST00000478938 AMPD2Q01433 879 aa24.07■■□□□ 1.44
SDF4-206ENST00000478938 RNF187Q5TA31 235 aaPredicted RBP24.07■■□□□ 1.44
SDF4-206ENST00000478938 TRMT44Q8IYL2 757 aaKnown RBP24.07■■□□□ 1.44
SDF4-206ENST00000478938 ZNF483Q8TF39 744 aaPredicted RBP24.07■■□□□ 1.44
SDF4-206ENST00000478938 ITSN1Q15811 1721 aa24.07■■□□□ 1.44
SDF4-206ENST00000478938 YEATS4O95619 227 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 BMP6P22004 513 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 CMA1P23946 247 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 PANX2Q96RD6 677 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 SH3GL2Q99962 352 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 NBPF3Q9H094 633 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 CCDC8Q9H0W5 538 aaPredicted RBP24.06■■□□□ 1.44
SDF4-206ENST00000478938 CARMIL3Q8ND23 1372 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 SALL1Q9NSC2 1324 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 RASSF9O75901 435 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 SMTNP53814 917 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 HINFPQ9BQA5 517 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 POLD4Q9HCU8 107 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 TLR7Q9NYK1 1049 aaKnown RBP24.06■■□□□ 1.44
SDF4-206ENST00000478938 NFE2L3Q9Y4A8 694 aa24.06■■□□□ 1.44
SDF4-206ENST00000478938 MYO1BO43795 1136 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 ARHGAP25P42331 645 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 EDC3Q96F86 508 aaKnown RBP24.05■■□□□ 1.44
SDF4-206ENST00000478938 VCPKMTQ9H867 229 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 SLC40A1Q9NP59 571 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 POLR3EQ9NVU0 708 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 JCADQ9P266 1359 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 PXDNLA1KZ92 1463 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 A0A1B0GUA9 196 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 CYP21A2P08686 494 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 FMR1Q06787 632 aaKnown RBP eCLIP24.05■■□□□ 1.44
SDF4-206ENST00000478938 RBL2Q08999 1139 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 NAA25Q14CX7 972 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 RASGRP2Q7LDG7 609 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 CCDC13Q8IYE1 715 aa24.05■■□□□ 1.44
SDF4-206ENST00000478938 AMPHP49418 695 aa24.04■■□□□ 1.44
SDF4-206ENST00000478938 USPL1Q5W0Q7 1092 aa24.04■■□□□ 1.44
SDF4-206ENST00000478938 CCDC129Q6ZRS4 1044 aa24.04■■□□□ 1.44
SDF4-206ENST00000478938 STOX1Q6ZVD7 989 aa24.04■■□□□ 1.44
SDF4-206ENST00000478938 ANKRD18AQ8IVF6 992 aa24.04■■□□□ 1.44
SDF4-206ENST00000478938 CNKSR2Q8WXI2 1034 aa24.04■■□□□ 1.44
SDF4-206ENST00000478938 SSBP05455 408 aaKnown RBP eCLIP24.04■■□□□ 1.44
SDF4-206ENST00000478938 E2F5Q15329 346 aa24.04■■□□□ 1.44
SDF4-206ENST00000478938 LONRF3Q496Y0 759 aa24.04■■□□□ 1.44
SDF4-206ENST00000478938 FOXP4Q8IVH2 680 aaPredicted RBP24.04■■□□□ 1.44
SDF4-206ENST00000478938 HDAC6Q9UBN7 1215 aa24.04■■□□□ 1.44
SDF4-206ENST00000478938 CHGBP05060 677 aa24.03■■□□□ 1.44
SDF4-206ENST00000478938 MTHFSDQ2M296 383 aaKnown RBP24.03■■□□□ 1.44
SDF4-206ENST00000478938 MMS19Q96T76 1030 aa24.03■■□□□ 1.44
SDF4-206ENST00000478938 GJB4Q9NTQ9 266 aa24.03■■□□□ 1.44
SDF4-206ENST00000478938 TSPOAP1O95153 1857 aa24.03■■□□□ 1.44
SDF4-206ENST00000478938 TEX33O43247 280 aa24.03■■□□□ 1.44
SDF4-206ENST00000478938 FDPSP14324 419 aaKnown RBP24.03■■□□□ 1.44
SDF4-206ENST00000478938 ZNF18P17022 549 aa24.03■■□□□ 1.44
SDF4-206ENST00000478938 METTL16Q86W50 562 aaKnown RBP24.03■■□□□ 1.44
SDF4-206ENST00000478938 N4BP2Q86UW6 1770 aaPredicted RBP24.03■■□□□ 1.44
SDF4-206ENST00000478938 GCKP35557 465 aa24.02■■□□□ 1.44
SDF4-206ENST00000478938 PDE6BP35913 854 aa24.02■■□□□ 1.44
SDF4-206ENST00000478938 MYSM1Q5VVJ2 828 aa24.02■■□□□ 1.44
SDF4-206ENST00000478938 FAM228AQ86W67 206 aa24.02■■□□□ 1.44
SDF4-206ENST00000478938 ZKSCAN8Q15776 578 aaPredicted RBP24.02■■□□□ 1.44
SDF4-206ENST00000478938 PCDHA5Q9Y5H7 936 aa24.02■■□□□ 1.44
SDF4-206ENST00000478938 POGZQ7Z3K3 1410 aa24.02■■□□□ 1.44
SDF4-206ENST00000478938 ENC1O14682 589 aa24.01■■□□□ 1.43
SDF4-206ENST00000478938 SNCBQ16143 134 aa24.01■■□□□ 1.43
SDF4-206ENST00000478938 TATDN2Q93075 761 aa24.01■■□□□ 1.43
SDF4-206ENST00000478938 SCLT1Q96NL6 688 aa24.01■■□□□ 1.43
SDF4-206ENST00000478938 SAMSN1Q9NSI8 373 aaKnown RBP24.01■■□□□ 1.43
SDF4-206ENST00000478938 HOOK1Q9UJC3 728 aaKnown RBP24.01■■□□□ 1.43
SDF4-206ENST00000478938 FOXN1O15353 648 aa24.01■■□□□ 1.43
SDF4-206ENST00000478938 ZEB2O60315 1214 aa24.01■■□□□ 1.43
SDF4-206ENST00000478938 RPSAP08865 295 aaKnown RBP24.01■■□□□ 1.43
SDF4-206ENST00000478938 MCM3P25205 808 aa24.01■■□□□ 1.43
SDF4-206ENST00000478938 CDR1P51861 262 aa24.01■■□□□ 1.43
SDF4-206ENST00000478938 SF3B2Q13435 895 aaKnown RBP24.01■■□□□ 1.43
SDF4-206ENST00000478938 TLDC1Q6P9B6 456 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms