RNA–Protein interactions for RNA: ENST00000478862.1

NCK1-206, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-206ENST00000478862 C1GALT1Q9NS00 363 aa6.47□□□□□ -1.37
NCK1-206ENST00000478862 CTSBP07858 339 aa6.46□□□□□ -1.38
NCK1-206ENST00000478862 ITPKAP23677 461 aa6.46□□□□□ -1.38
NCK1-206ENST00000478862 LCE1DQ5T752 114 aa6.46□□□□□ -1.38
NCK1-206ENST00000478862 EPS8L3Q8TE67 593 aaKnown RBP6.46□□□□□ -1.38
NCK1-206ENST00000478862 FBF1Q8TES7 1133 aa6.46□□□□□ -1.38
NCK1-206ENST00000478862 DUSP9Q99956 384 aaKnown RBP6.46□□□□□ -1.38
NCK1-206ENST00000478862 WDR18Q9BV38 432 aa6.46□□□□□ -1.38
NCK1-206ENST00000478862 NLRP2Q9NX02 1062 aa6.46□□□□□ -1.38
NCK1-206ENST00000478862 TRAK1Q9UPV9 953 aa6.46□□□□□ -1.38
NCK1-206ENST00000478862 GADD45BO75293 160 aaPredicted RBP6.45□□□□□ -1.38
NCK1-206ENST00000478862 FARP2O94887 1054 aaPredicted RBP6.45□□□□□ -1.38
NCK1-206ENST00000478862 PAPLNO95428 1278 aa6.45□□□□□ -1.38
NCK1-206ENST00000478862 FAM87AP0C7U9 286 aa6.45□□□□□ -1.38
NCK1-206ENST00000478862 ID3Q02535 119 aa6.45□□□□□ -1.38
NCK1-206ENST00000478862 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.45□□□□□ -1.38
NCK1-206ENST00000478862 RPS26P11Q5JNZ5 115 aaPredicted RBP6.45□□□□□ -1.38
NCK1-206ENST00000478862 SEZ6L2Q6UXD5 910 aa6.45□□□□□ -1.38
NCK1-206ENST00000478862 ATG4DQ86TL0 474 aaPredicted RBP6.45□□□□□ -1.38
NCK1-206ENST00000478862 KSR1Q8IVT5 923 aa6.45□□□□□ -1.38
NCK1-206ENST00000478862 PI4K2BQ8TCG2 481 aa6.45□□□□□ -1.38
NCK1-206ENST00000478862 SLC38A3Q99624 504 aa6.45□□□□□ -1.38
NCK1-206ENST00000478862 RC3H2Q9HBD1 1191 aaKnown RBP6.45□□□□□ -1.38
NCK1-206ENST00000478862 NPHS2Q9NP85 383 aa6.45□□□□□ -1.38
NCK1-206ENST00000478862 PPP4R2Q9NY27 417 aa6.45□□□□□ -1.38
NCK1-206ENST00000478862 VAV3Q9UKW4 847 aa6.45□□□□□ -1.38
NCK1-206ENST00000478862 DYNC1LI2O43237 492 aaPredicted RBP6.44□□□□□ -1.38
NCK1-206ENST00000478862 RNGTTO60942 597 aaKnown RBP6.44□□□□□ -1.38
NCK1-206ENST00000478862 ECEL1O95672 775 aa6.44□□□□□ -1.38
NCK1-206ENST00000478862 XPCQ01831 940 aaPredicted RBP6.44□□□□□ -1.38
NCK1-206ENST00000478862 PI16Q6UXB8 463 aa6.44□□□□□ -1.38
NCK1-206ENST00000478862 ZNF574Q6ZN55 896 aaPredicted RBP6.44□□□□□ -1.38
NCK1-206ENST00000478862 SPRED2Q7Z698 418 aa6.44□□□□□ -1.38
NCK1-206ENST00000478862 SMYD4Q8IYR2 804 aaPredicted RBP6.44□□□□□ -1.38
NCK1-206ENST00000478862 ZNF428Q96B54 188 aa6.44□□□□□ -1.38
NCK1-206ENST00000478862 SSU72Q9NP77 194 aaKnown RBP6.44□□□□□ -1.38
NCK1-206ENST00000478862 RNF19AQ9NV58 838 aa6.44□□□□□ -1.38
NCK1-206ENST00000478862 PARP2Q9UGN5 583 aa6.44□□□□□ -1.38
NCK1-206ENST00000478862 PPP1R9AQ9ULJ8 1098 aa6.44□□□□□ -1.38
NCK1-206ENST00000478862 FUT4P22083 530 aa6.43□□□□□ -1.38
NCK1-206ENST00000478862 PRKCQQ04759 706 aa6.43□□□□□ -1.38
NCK1-206ENST00000478862 PPP2R3AQ06190 1150 aa6.43□□□□□ -1.38
NCK1-206ENST00000478862 CDK5R2Q13319 367 aa6.43□□□□□ -1.38
NCK1-206ENST00000478862 IFI16Q16666 785 aaKnown RBP6.43□□□□□ -1.38
NCK1-206ENST00000478862 ZNF648Q5T619 568 aaPredicted RBP6.43□□□□□ -1.38
NCK1-206ENST00000478862 FAM168AQ92567 244 aa6.43□□□□□ -1.38
NCK1-206ENST00000478862 CRIM1Q9NZV1 1036 aa6.43□□□□□ -1.38
NCK1-206ENST00000478862 SPG7Q9UQ90 795 aa6.43□□□□□ -1.38
NCK1-206ENST00000478862 DBX1A6NMT0 343 aa6.42□□□□□ -1.38
NCK1-206ENST00000478862 LIG1P18858 919 aa6.42□□□□□ -1.38
NCK1-206ENST00000478862 GNA15P30679 374 aa6.42□□□□□ -1.38
NCK1-206ENST00000478862 RBM25P49756 843 aaKnown RBP6.42□□□□□ -1.38
NCK1-206ENST00000478862 BNIP3Q12983 259 aa6.42□□□□□ -1.38
NCK1-206ENST00000478862 PLD6Q8N2A8 252 aaKnown RBP6.42□□□□□ -1.38
NCK1-206ENST00000478862 TMEM40Q8WWA1 233 aa6.42□□□□□ -1.38
NCK1-206ENST00000478862 HRASLS5Q96KN8 279 aa6.42□□□□□ -1.38
NCK1-206ENST00000478862 FRMD6Q96NE9 622 aa6.42□□□□□ -1.38
NCK1-206ENST00000478862 BCL11AQ9H165 835 aa6.42□□□□□ -1.38
NCK1-206ENST00000478862 MKNK2Q9HBH9 465 aa6.42□□□□□ -1.38
NCK1-206ENST00000478862 KRT82Q9NSB4 513 aa6.42□□□□□ -1.38
NCK1-206ENST00000478862 PCOLCE2Q9UKZ9 415 aa6.42□□□□□ -1.38
NCK1-206ENST00000478862 TMEM265A0A087WTH1 108 aa6.41□□□□□ -1.38
NCK1-206ENST00000478862 TMEM238LA0A1B0GVL6 79 aa6.41□□□□□ -1.38
NCK1-206ENST00000478862 GIPC1O14908 333 aa6.41□□□□□ -1.38
NCK1-206ENST00000478862 TMPRSS2O15393 492 aa6.41□□□□□ -1.38
NCK1-206ENST00000478862 DAB2P98082 770 aa6.41□□□□□ -1.38
NCK1-206ENST00000478862 PSMD2Q13200 908 aa6.41□□□□□ -1.38
NCK1-206ENST00000478862 ANGEL2Q5VTE6 544 aaKnown RBP6.41□□□□□ -1.38
NCK1-206ENST00000478862 TMC4Q7Z404 712 aa6.41□□□□□ -1.38
NCK1-206ENST00000478862 FAM181AQ8N9Y4 354 aa6.41□□□□□ -1.38
NCK1-206ENST00000478862 FAM161BQ96MY7 647 aa6.41□□□□□ -1.38
NCK1-206ENST00000478862 FANCD2OSQ96PS1 177 aa6.41□□□□□ -1.38
NCK1-206ENST00000478862 BCO2Q9BYV7 579 aa6.41□□□□□ -1.38
NCK1-206ENST00000478862 ZC3H12CQ9C0D7 883 aaKnown RBP6.41□□□□□ -1.38
NCK1-206ENST00000478862 CCDC86Q9H6F5 360 aaKnown RBP6.41□□□□□ -1.38
NCK1-206ENST00000478862 UNCXA6NJT0 531 aa6.4□□□□□ -1.38
NCK1-206ENST00000478862 GSTP1P09211 210 aaKnown RBP6.4□□□□□ -1.38
NCK1-206ENST00000478862 CD8BP10966 210 aa6.4□□□□□ -1.38
NCK1-206ENST00000478862 GRM2Q14416 872 aa6.4□□□□□ -1.38
NCK1-206ENST00000478862 AOC3Q16853 763 aa6.4□□□□□ -1.38
NCK1-206ENST00000478862 PRPF40BQ6NWY9 871 aaKnown RBP6.4□□□□□ -1.38
NCK1-206ENST00000478862 NXPE4Q6UWF7 544 aa6.4□□□□□ -1.38
NCK1-206ENST00000478862 DTHD1Q6ZMT9 781 aa6.4□□□□□ -1.38
NCK1-206ENST00000478862 OSBPL7Q9BZF2 842 aa6.4□□□□□ -1.38
NCK1-206ENST00000478862 MRS2Q9HD23 443 aa6.4□□□□□ -1.38
NCK1-206ENST00000478862 AK5Q9Y6K8 562 aa6.4□□□□□ -1.38
NCK1-206ENST00000478862 SORBS3O60504 671 aa6.39□□□□□ -1.39
NCK1-206ENST00000478862 ZNF157P51786 506 aaPredicted RBP6.39□□□□□ -1.39
NCK1-206ENST00000478862 GLIS3Q8NEA6 775 aa6.39□□□□□ -1.39
NCK1-206ENST00000478862 KCNB2Q92953 911 aa6.39□□□□□ -1.39
NCK1-206ENST00000478862 ABCB6Q9NP58 842 aa6.39□□□□□ -1.39
NCK1-206ENST00000478862 FAM53CQ9NYF3 392 aa6.39□□□□□ -1.39
NCK1-206ENST00000478862 GPN3Q9UHW5 284 aaPredicted RBP6.39□□□□□ -1.39
NCK1-206ENST00000478862 CEACAM5P06731 702 aa6.38□□□□□ -1.39
NCK1-206ENST00000478862 RNASE1P07998 156 aaKnown RBP6.38□□□□□ -1.39
NCK1-206ENST00000478862 HCLS1P14317 486 aaPredicted RBP6.38□□□□□ -1.39
NCK1-206ENST00000478862 EIF4BP23588 611 aaKnown RBP6.38□□□□□ -1.39
NCK1-206ENST00000478862 ITGAEP38570 1179 aa6.38□□□□□ -1.39
NCK1-206ENST00000478862 TTLL4Q14679 1199 aa6.38□□□□□ -1.39
NCK1-206ENST00000478862 ZNF124Q15973 351 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms