RNA–Protein interactions for RNA: ENST00000478848.1

FMR1-211, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-211ENST00000478848 DCAF15Q66K64 600 aa11.06□□□□□ -0.64
FMR1-211ENST00000478848 SH3RF1Q7Z6J0 888 aa11.06□□□□□ -0.64
FMR1-211ENST00000478848 ARAP2Q8WZ64 1704 aa11.06□□□□□ -0.64
FMR1-211ENST00000478848 REV3LO60673 3130 aa11.06□□□□□ -0.64
FMR1-211ENST00000478848 PRRC2BQ5JSZ5 2229 aaKnown RBP11.05□□□□□ -0.64
FMR1-211ENST00000478848 TRIM43BA6NCK2 446 aa11.05□□□□□ -0.64
FMR1-211ENST00000478848 CACNB2Q08289 660 aaPredicted RBP11.05□□□□□ -0.64
FMR1-211ENST00000478848 CSPP1Q1MSJ5 1256 aa11.05□□□□□ -0.64
FMR1-211ENST00000478848 CCDC129Q6ZRS4 1044 aa11.05□□□□□ -0.64
FMR1-211ENST00000478848 FASTKD5Q7L8L6 764 aaKnown RBP11.05□□□□□ -0.64
FMR1-211ENST00000478848 TRIM43Q96BQ3 446 aaPredicted RBP11.05□□□□□ -0.64
FMR1-211ENST00000478848 ZNF341Q9BYN7 854 aa11.05□□□□□ -0.64
FMR1-211ENST00000478848 TTF2Q9UNY4 1162 aaKnown RBP11.05□□□□□ -0.64
FMR1-211ENST00000478848 GRXCR1A8MXD5 290 aa11.04□□□□□ -0.64
FMR1-211ENST00000478848 CXCL11O14625 94 aa11.04□□□□□ -0.64
FMR1-211ENST00000478848 HOOK2Q96ED9 719 aa11.04□□□□□ -0.64
FMR1-211ENST00000478848 CD320Q9NPF0 282 aa11.04□□□□□ -0.64
FMR1-211ENST00000478848 PDLIM7Q9NR12 457 aa11.04□□□□□ -0.64
FMR1-211ENST00000478848 TSPYL4Q9UJ04 414 aa11.04□□□□□ -0.64
FMR1-211ENST00000478848 SERPINA10Q9UK55 444 aa11.04□□□□□ -0.64
FMR1-211ENST00000478848 BRWD1Q9NSI6 2320 aa11.04□□□□□ -0.64
FMR1-211ENST00000478848 CACNA1HO95180 2353 aa11.04□□□□□ -0.64
FMR1-211ENST00000478848 C5orf42Q9H799 3197 aa11.04□□□□□ -0.64
FMR1-211ENST00000478848 ZNF318Q5VUA4 2279 aa11.04□□□□□ -0.64
FMR1-211ENST00000478848 SNAP23O00161 211 aa11.03□□□□□ -0.64
FMR1-211ENST00000478848 ERC2O15083 957 aa11.03□□□□□ -0.64
FMR1-211ENST00000478848 TLL1O43897 1013 aa11.03□□□□□ -0.64
FMR1-211ENST00000478848 FKBP1AP62942 108 aaKnown RBP11.03□□□□□ -0.64
FMR1-211ENST00000478848 TRIM28Q13263 835 aaKnown RBP11.03□□□□□ -0.64
FMR1-211ENST00000478848 FAM110CQ1W6H9 321 aa11.03□□□□□ -0.64
FMR1-211ENST00000478848 TRIM60Q495X7 471 aa11.03□□□□□ -0.64
FMR1-211ENST00000478848 PBX4Q9BYU1 374 aa11.03□□□□□ -0.64
FMR1-211ENST00000478848 CHPF2Q9P2E5 772 aa11.03□□□□□ -0.64
FMR1-211ENST00000478848 CHD7Q9P2D1 2997 aa11.03□□□□□ -0.64
FMR1-211ENST00000478848 AK9Q5TCS8 1911 aa11.02□□□□□ -0.65
FMR1-211ENST00000478848 A0A0G2JLL6 359 aaPredicted RBP11.02□□□□□ -0.65
FMR1-211ENST00000478848 ITGB8P26012 769 aa11.02□□□□□ -0.65
FMR1-211ENST00000478848 PRRT2Q7Z6L0 340 aaPredicted RBP11.02□□□□□ -0.65
FMR1-211ENST00000478848 KCNH6Q9H252 994 aa11.02□□□□□ -0.65
FMR1-211ENST00000478848 GREM2Q9H772 168 aa11.02□□□□□ -0.65
FMR1-211ENST00000478848 SLC45A1Q9Y2W3 748 aa11.02□□□□□ -0.65
FMR1-211ENST00000478848 ZHX2Q9Y6X8 837 aa11.02□□□□□ -0.65
FMR1-211ENST00000478848 SPEF2Q9C093 1822 aa11.02□□□□□ -0.65
FMR1-211ENST00000478848 ZKSCAN1P17029 563 aaPredicted RBP11.01□□□□□ -0.65
FMR1-211ENST00000478848 CRKP46108 304 aa11.01□□□□□ -0.65
FMR1-211ENST00000478848 CTSWP56202 376 aa11.01□□□□□ -0.65
FMR1-211ENST00000478848 MFSD14BQ5SR56 506 aa11.01□□□□□ -0.65
FMR1-211ENST00000478848 SLC39A5Q6ZMH5 540 aa11.01□□□□□ -0.65
FMR1-211ENST00000478848 ANKS1AQ92625 1134 aa11.01□□□□□ -0.65
FMR1-211ENST00000478848 ANKRD2Q9GZV1 360 aa11.01□□□□□ -0.65
FMR1-211ENST00000478848 NCOR2Q9Y618 2525 aa11.01□□□□□ -0.65
FMR1-211ENST00000478848 PLXNA1Q9UIW2 1896 aa11□□□□□ -0.65
FMR1-211ENST00000478848 PCCAP05165 728 aaPredicted RBP11□□□□□ -0.65
FMR1-211ENST00000478848 IL1R1P14778 569 aa11□□□□□ -0.65
FMR1-211ENST00000478848 IGHMBP2P38935 993 aaKnown RBP11□□□□□ -0.65
FMR1-211ENST00000478848 FPGSQ05932 587 aa11□□□□□ -0.65
FMR1-211ENST00000478848 CCL14Q16627 93 aa11□□□□□ -0.65
FMR1-211ENST00000478848 ZNF804AQ7Z570 1209 aa11□□□□□ -0.65
FMR1-211ENST00000478848 HERVK_113Q902F9 699 aa11□□□□□ -0.65
FMR1-211ENST00000478848 FAM186AA6NE01 2351 aa10.99□□□□□ -0.65
FMR1-211ENST00000478848 LRRC37A2A6NM11 1700 aa10.99□□□□□ -0.65
FMR1-211ENST00000478848 DNM1LO00429 736 aa10.99□□□□□ -0.65
FMR1-211ENST00000478848 NOL9Q5SY16 702 aaKnown RBP10.99□□□□□ -0.65
FMR1-211ENST00000478848 GJC2Q5T442 439 aaPredicted RBP10.99□□□□□ -0.65
FMR1-211ENST00000478848 TTLL11Q8NHH1 800 aa10.99□□□□□ -0.65
FMR1-211ENST00000478848 NUDT12Q9BQG2 462 aa10.99□□□□□ -0.65
FMR1-211ENST00000478848 TMOD2Q9NZR1 351 aa10.99□□□□□ -0.65
FMR1-211ENST00000478848 ZNF112Q9UJU3 913 aa10.99□□□□□ -0.65
FMR1-211ENST00000478848 NUDCQ9Y266 331 aa10.99□□□□□ -0.65
FMR1-211ENST00000478848 DAGLAQ9Y4D2 1042 aa10.99□□□□□ -0.65
FMR1-211ENST00000478848 ACACBO00763 2458 aa10.98□□□□□ -0.65
FMR1-211ENST00000478848 XRCC5P13010 732 aaKnown RBP10.98□□□□□ -0.65
FMR1-211ENST00000478848 RAG1P15918 1043 aa10.98□□□□□ -0.65
FMR1-211ENST00000478848 TREML2Q5T2D2 321 aa10.98□□□□□ -0.65
FMR1-211ENST00000478848 FAM83AQ86UY5 434 aa10.98□□□□□ -0.65
FMR1-211ENST00000478848 RPAP1Q9BWH6 1393 aaPredicted RBP10.98□□□□□ -0.65
FMR1-211ENST00000478848 CHD6Q8TD26 2715 aa10.98□□□□□ -0.65
FMR1-211ENST00000478848 KMT2BQ9UMN6 2715 aaPredicted RBP10.97□□□□□ -0.65
FMR1-211ENST00000478848 TRIM75PA6NK02 468 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 GFRA3O60609 400 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 TAF5LO75529 589 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 CNGA1P29973 690 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 TLE2Q04725 743 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 CHRNDQ07001 517 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 TRMT44Q8IYL2 757 aaKnown RBP10.97□□□□□ -0.65
FMR1-211ENST00000478848 CFAP53Q96M91 514 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 MYD88Q99836 296 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 NKX2-4Q9H2Z4 354 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 PICK1Q9NRD5 415 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 DDX20Q9UHI6 824 aaKnown RBP10.97□□□□□ -0.65
FMR1-211ENST00000478848 MSRAQ9UJ68 235 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 PNMA3Q9UL41 463 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 AGTPBP1Q9UPW5 1226 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 AFG3L2Q9Y4W6 797 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 PLXNB2O15031 1838 aa10.97□□□□□ -0.65
FMR1-211ENST00000478848 ANKRD11Q6UB99 2663 aaPredicted RBP10.96□□□□□ -0.65
FMR1-211ENST00000478848 GCLCP48506 637 aaPredicted RBP10.96□□□□□ -0.65
FMR1-211ENST00000478848 KRT24Q2M2I5 525 aa10.96□□□□□ -0.65
FMR1-211ENST00000478848 ERMP1Q7Z2K6 904 aa10.96□□□□□ -0.65
FMR1-211ENST00000478848 CCDC191Q8NCU4 936 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms