RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	ANAPC4	Q9UJX5	808 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	HPS5	Q9UPZ3	1129 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	SNED1	Q8TER0	1413 aa		11.24	□□□□□ -0.61
ATG7-223	ENST00000478638	LAMB1	P07942	1786 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	SH2B2	O14492	632 aa	Predicted RBP	11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	PRC1	O43663	620 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	GADD45B	O75293	160 aa	Predicted RBP	11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	RAD17	O75943	681 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	FGR	P09769	529 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	RCAN1	P53805	252 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	APOBR	Q0VD83	1088 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	ATL3	Q6DD88	541 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	CIAPIN1	Q6FI81	312 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	GIMAP6	Q6P9H5	292 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	LRSAM1	Q6UWE0	723 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	TXNRD3	Q86VQ6	643 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	STAG1	Q8WVM7	1258 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	SYAP1	Q96A49	352 aa	Predicted RBP	11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	AIDA	Q96BJ3	306 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	RIOK1	Q9BRS2	568 aa	Known RBP	11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	CNPY2	Q9Y2B0	182 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	KIF3A	Q9Y496	699 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	GJA3	Q9Y6H8	435 aa		11.23	□□□□□ -0.61
ATG7-223	ENST00000478638	PTPDC1	A2A3K4	754 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	GLTPD2	A6NH11	291 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	MBD4	O95243	580 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	KLRK1	P26718	216 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	ADD1	P35611	737 aa	Known RBP	11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	LIFR	P42702	1097 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	GYG1	P46976	350 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	KRT85	P78386	507 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	DNM1	Q05193	864 aa	Known RBP	11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	CXCL9	Q07325	125 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	ECM29	Q5VYK3	1845 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	IGDCC4	Q8TDY8	1250 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	ZNF384	Q8TF68	577 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	FBXW7	Q969H0	707 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	LRRC2	Q9BYS8	371 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	CD209	Q9NNX6	404 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	BRPF3	Q9ULD4	1205 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	TACC3	Q9Y6A5	838 aa		11.22	□□□□□ -0.61
ATG7-223	ENST00000478638	USP17L3	A6NCW0	530 aa		11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	USP17L4	A6NCW7	530 aa		11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	YDJC	A8MPS7	323 aa		11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	DDN	O94850	711 aa	Predicted RBP	11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	FDPS	P14324	419 aa	Known RBP	11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	HAND2	P61296	217 aa		11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	CYB5R4	Q7L1T6	521 aa		11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	USP17L1	Q7RTZ2	530 aa		11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	RALYL	Q86SE5	291 aa	Known RBP	11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	TTC6	Q86TZ1	520 aa		11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	LCORL	Q8N3X6	602 aa		11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	NKX2-3	Q8TAU0	364 aa		11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	ZNF526	Q8TF50	670 aa	Predicted RBP	11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	PPP1R9B	Q96SB3	815 aa		11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	CNNM2	Q9H8M5	875 aa		11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	RBM27	Q9P2N5	1060 aa	Known RBP	11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	ANGEL1	Q9UNK9	670 aa	Known RBP	11.21	□□□□□ -0.61
ATG7-223	ENST00000478638	ZNF541	Q9H0D2	1346 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	VPS37C	A5D8V6	355 aa	Predicted RBP	11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	PSMD14	O00487	310 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	DHX16	O60231	1041 aa	Known RBP	11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	PC	P11498	1178 aa	Known RBP	11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	NT5C2	P49902	561 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	STK3	Q13188	491 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	AKNAD1	Q5T1N1	836 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	CCDC183	Q5T5S1	534 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	ADGRA1	Q86SQ6	560 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	GPC2	Q8N158	579 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	PANK2	Q9BZ23	570 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	NAPB	Q9H115	298 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	ARMT1	Q9H993	441 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	GDPD2	Q9HCC8	539 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	GPHN	Q9NQX3	736 aa	Predicted RBP	11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	KCNQ5	Q9NR82	932 aa		11.2	□□□□□ -0.62
ATG7-223	ENST00000478638	BRCA1	P38398	1863 aa	Known RBP	11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	NEDD4	P46934	1319 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	LETM1	O95202	739 aa	Predicted RBP	11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	IL1R1	P14778	569 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	NCL	P19338	710 aa	Known RBP	11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	CYP7A1	P22680	504 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	LMOD1	P29536	600 aa	Predicted RBP	11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	GTF2I	P78347	998 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	FGD1	P98174	961 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	TRDN	Q13061	729 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	STRIP1	Q5VSL9	837 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	APOA5	Q6Q788	366 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	TDRD7	Q8NHU6	1098 aa	Known RBP	11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	NSUN4	Q96CB9	384 aa	Known RBP	11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	FUCA2	Q9BTY2	467 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	NACAP1	Q9BZK3	213 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	KRT23	Q9C075	422 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	LY9	Q9HBG7	655 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	LRP2BP	Q9P2M1	347 aa		11.19	□□□□□ -0.62
ATG7-223	ENST00000478638	ARFGEF1	Q9Y6D6	1849 aa		11.19	□□□□□ -0.62

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