RNA–Protein interactions for RNA: ENST00000478172.1

TCAF1-204, Transcript of TRPM8 channel associated factor 1, human

TSL 4

Gene TCAF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCAF1-204	ENST00000478172	LRRFIP2	Q9Y608	721 aa	Known RBP	13.17	□□□□□ -0.3
TCAF1-204	ENST00000478172	ZHX2	Q9Y6X8	837 aa		13.17	□□□□□ -0.3
TCAF1-204	ENST00000478172		A0A0G2JLL6	359 aa	Predicted RBP	13.16	□□□□□ -0.3
TCAF1-204	ENST00000478172	ADCY3	O60266	1144 aa		13.16	□□□□□ -0.3
TCAF1-204	ENST00000478172	UBTFL1	P0CB47	393 aa	Predicted RBP	13.16	□□□□□ -0.3
TCAF1-204	ENST00000478172	PTPRA	P18433	802 aa		13.16	□□□□□ -0.3
TCAF1-204	ENST00000478172	PICALM	Q13492	652 aa		13.16	□□□□□ -0.3
TCAF1-204	ENST00000478172	FASTKD5	Q7L8L6	764 aa	Known RBP	13.16	□□□□□ -0.3
TCAF1-204	ENST00000478172	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.16	□□□□□ -0.3
TCAF1-204	ENST00000478172	DZIP1	Q86YF9	867 aa	Known RBP	13.16	□□□□□ -0.3
TCAF1-204	ENST00000478172	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.16	□□□□□ -0.3
TCAF1-204	ENST00000478172	NR2E3	Q9Y5X4	410 aa		13.16	□□□□□ -0.3
TCAF1-204	ENST00000478172	ATRNL1	Q5VV63	1379 aa		13.16	□□□□□ -0.3
TCAF1-204	ENST00000478172	ZNF521	Q96K83	1311 aa		13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	SALL1	Q9NSC2	1324 aa		13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	ALPK3	Q96L96	1907 aa		13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	DOCK3	Q8IZD9	2030 aa		13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	TRIM75P	A6NK02	468 aa		13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	PHF20L1	A8MW92	1017 aa		13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	TNPO2	O14787	897 aa	Known RBP	13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	ELN	P15502	786 aa		13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	FLT3LG	P49771	235 aa		13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	UBE2Q1	Q7Z7E8	422 aa		13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	ZGPAT	Q8N5A5	531 aa	Known RBP	13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	ABCF2	Q9UG63	623 aa		13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	RANBP2	P49792	3224 aa	Known RBP	13.15	□□□□□ -0.3
TCAF1-204	ENST00000478172	SEMA3E	O15041	775 aa		13.14	□□□□□ -0.31
TCAF1-204	ENST00000478172	ENTPD3	O75355	529 aa		13.14	□□□□□ -0.31
TCAF1-204	ENST00000478172	CIAO1	O76071	339 aa		13.14	□□□□□ -0.31
TCAF1-204	ENST00000478172	TFRC	P02786	760 aa	Known RBP	13.14	□□□□□ -0.31
TCAF1-204	ENST00000478172	INHA	P05111	366 aa		13.14	□□□□□ -0.31
TCAF1-204	ENST00000478172	SLURP2	P0DP57	97 aa		13.14	□□□□□ -0.31
TCAF1-204	ENST00000478172	ADORA1	P30542	326 aa		13.14	□□□□□ -0.31
TCAF1-204	ENST00000478172	SMC4	Q9NTJ3	1288 aa		13.14	□□□□□ -0.31
TCAF1-204	ENST00000478172	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.14	□□□□□ -0.31
TCAF1-204	ENST00000478172	PA2G4	Q9UQ80	394 aa	Known RBP	13.14	□□□□□ -0.31
TCAF1-204	ENST00000478172	AFG3L2	Q9Y4W6	797 aa		13.14	□□□□□ -0.31
TCAF1-204	ENST00000478172	LOC285556	D6RIA3	1793 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	RFX7	Q2KHR2	1363 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	DDTL	A6NHG4	134 aa	Predicted RBP	13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172		E9PSI1	815 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	ZBTB7B	O15156	539 aa	Predicted RBP	13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	EVI5	O60447	810 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	SGPL1	O95470	568 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	IL15	P40933	162 aa	Predicted RBP	13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	CCDC102B	Q68D86	513 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	SH3BP5L	Q7L8J4	393 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	CCDC84	Q86UT8	332 aa	Predicted RBP	13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	SLF2	Q8IX21	1173 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	ANKRD13C	Q8N6S4	541 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	DEFB118	Q96PH6	123 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	IDI2	Q9BXS1	227 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	FBXO3	Q9UK99	471 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	GAK	O14976	1311 aa		13.13	□□□□□ -0.31
TCAF1-204	ENST00000478172	CTNND1	O60716	968 aa	Known RBP	13.12	□□□□□ -0.31
TCAF1-204	ENST00000478172	BTD	P43251	543 aa		13.12	□□□□□ -0.31
TCAF1-204	ENST00000478172	RASGRF1	Q13972	1273 aa		13.12	□□□□□ -0.31
TCAF1-204	ENST00000478172	COA7	Q96BR5	231 aa		13.12	□□□□□ -0.31
TCAF1-204	ENST00000478172	DDX4	Q9NQI0	724 aa	Known RBP	13.12	□□□□□ -0.31
TCAF1-204	ENST00000478172	SLC45A1	Q9Y2W3	748 aa		13.12	□□□□□ -0.31
TCAF1-204	ENST00000478172	MROH7-TTC4	A0A0A0MT08	1334 aa		13.12	□□□□□ -0.31
TCAF1-204	ENST00000478172	FAM196B	A6NMK8	535 aa		13.11	□□□□□ -0.31
TCAF1-204	ENST00000478172	ALDH1L2	Q3SY69	923 aa		13.11	□□□□□ -0.31
TCAF1-204	ENST00000478172	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.11	□□□□□ -0.31
TCAF1-204	ENST00000478172	PXYLP1	Q8TE99	480 aa		13.11	□□□□□ -0.31
TCAF1-204	ENST00000478172	PNMA3	Q9UL41	463 aa		13.11	□□□□□ -0.31
TCAF1-204	ENST00000478172	AGTPBP1	Q9UPW5	1226 aa		13.11	□□□□□ -0.31
TCAF1-204	ENST00000478172	TIMM10	P62072	90 aa		13.1	□□□□□ -0.31
TCAF1-204	ENST00000478172	IRF5	Q13568	498 aa		13.1	□□□□□ -0.31
TCAF1-204	ENST00000478172	TREML2	Q5T2D2	321 aa		13.1	□□□□□ -0.31
TCAF1-204	ENST00000478172	ERICH6	Q7L0X2	663 aa		13.1	□□□□□ -0.31
TCAF1-204	ENST00000478172	PRO3102	Q9H379	93 aa		13.1	□□□□□ -0.31
TCAF1-204	ENST00000478172	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
TCAF1-204	ENST00000478172	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.09	□□□□□ -0.31
TCAF1-204	ENST00000478172	MECOM	Q03112	1051 aa		13.09	□□□□□ -0.31
TCAF1-204	ENST00000478172	SLFN5	Q08AF3	891 aa		13.09	□□□□□ -0.31
TCAF1-204	ENST00000478172	DDX60L	Q5H9U9	1706 aa	Known RBP	13.09	□□□□□ -0.31
TCAF1-204	ENST00000478172	PAWR	Q96IZ0	340 aa	Known RBP	13.09	□□□□□ -0.31
TCAF1-204	ENST00000478172	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.09	□□□□□ -0.31	8e-10	■■■□□ 18.8
TCAF1-204	ENST00000478172	PAK6	Q9NQU5	681 aa	Predicted RBP	13.09	□□□□□ -0.31
TCAF1-204	ENST00000478172	NOB1	Q9ULX3	412 aa	Known RBP	13.09	□□□□□ -0.31
TCAF1-204	ENST00000478172	HDAC5	Q9UQL6	1122 aa		13.09	□□□□□ -0.31
TCAF1-204	ENST00000478172		A0A1B0GUL7	405 aa		13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	MAP3K10	Q02779	954 aa		13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	SPP2	Q13103	211 aa		13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	MVP	Q14764	893 aa	Known RBP	13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	FAM110C	Q1W6H9	321 aa		13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	DIS3L	Q8TF46	1054 aa	Known RBP	13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	XAGE2	Q96GT9	111 aa		13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	NEUROD6	Q96NK8	337 aa		13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	COPRS	Q9NQ92	184 aa		13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	STAP2	Q9UGK3	403 aa		13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	PLXNB2	O15031	1838 aa		13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	PDS5A	Q29RF7	1337 aa	Known RBP	13.08	□□□□□ -0.32
TCAF1-204	ENST00000478172	MAST2	Q6P0Q8	1798 aa		13.07	□□□□□ -0.32
TCAF1-204	ENST00000478172		A0A1W2PPC1	479 aa		13.07	□□□□□ -0.32
TCAF1-204	ENST00000478172	SOX1	O00570	391 aa	Predicted RBP	13.07	□□□□□ -0.32
TCAF1-204	ENST00000478172	HMGCS2	P54868	508 aa		13.07	□□□□□ -0.32
TCAF1-204	ENST00000478172	RHBDL3	P58872	404 aa		13.07	□□□□□ -0.32
TCAF1-204	ENST00000478172	TFCP2	Q12800	502 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms