RNA–Protein interactions for RNA: ENST00000478089.1

FBXO42-204, Transcript of F-box protein 42, humanhuman

TSL 1 (best)

Gene FBXO42, Length 2,920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-204ENST00000478089 TMEM110-MUSTN1A8MSY1 372 aa9.14□□□□□ -0.95
FBXO42-204ENST00000478089 HOXD10P28358 340 aa9.14□□□□□ -0.95
FBXO42-204ENST00000478089 EHHADHQ08426 723 aa9.14□□□□□ -0.95
FBXO42-204ENST00000478089 SUGP1Q8IWZ8 645 aaKnown RBP9.14□□□□□ -0.95
FBXO42-204ENST00000478089 ATRIPQ8WXE1 791 aa9.14□□□□□ -0.95
FBXO42-204ENST00000478089 TRMT1Q9NXH9 659 aaKnown RBP9.14□□□□□ -0.95
FBXO42-204ENST00000478089 BLOC1S6Q9UL45 172 aa9.14□□□□□ -0.95
FBXO42-204ENST00000478089 RNASEH2AO75792 299 aaKnown RBP9.13□□□□□ -0.95
FBXO42-204ENST00000478089 PIK3CAP42336 1068 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 PPP2R5BQ15173 497 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 VPS72Q15906 364 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 KIAA0907Q7Z7F0 614 aaPredicted RBP9.13□□□□□ -0.95
FBXO42-204ENST00000478089 ETAA1Q9NY74 926 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 POGKQ9P215 609 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 KNDC1Q76NI1 1749 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 PLIN1O60240 522 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 BBOX1O75936 387 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 VCAM1P19320 739 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 EXOSC10Q01780 885 aaKnown RBP9.13□□□□□ -0.95
FBXO42-204ENST00000478089 DDB1Q16531 1140 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 SAMD14Q8IZD0 417 aaPredicted RBP9.13□□□□□ -0.95
FBXO42-204ENST00000478089 TRIML1Q8N9V2 468 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 MIGA1Q8NAN2 632 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 FBXO41Q8TF61 875 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 SYMPKQ92797 1274 aaKnown RBP9.13□□□□□ -0.95
FBXO42-204ENST00000478089 IKBKGQ9Y6K9 419 aa9.13□□□□□ -0.95
FBXO42-204ENST00000478089 NKTRP30414 1462 aaKnown RBP9.13□□□□□ -0.95
FBXO42-204ENST00000478089 NR1H3Q13133 447 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 INF2Q27J81 1249 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 RELTQ969Z4 430 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 SLKQ9H2G2 1235 aaPredicted RBP9.12□□□□□ -0.95
FBXO42-204ENST00000478089 NEUROD4Q9HD90 331 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 LZTS1Q9Y250 596 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 NLRP1Q9C000 1473 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 MTHFSP49914 203 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 CHMP4BP1P59074 171 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 TMED1Q13445 227 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 LMBRD2Q68DH5 695 aaPredicted RBP9.12□□□□□ -0.95
FBXO42-204ENST00000478089 CHADLQ6NUI6 762 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 PDXDC1Q6P996 788 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 PAF1Q8N7H5 531 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 ERP27Q96DN0 273 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 CALCOCO1Q9P1Z2 691 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 CHMP3Q9Y3E7 222 aa9.12□□□□□ -0.95
FBXO42-204ENST00000478089 CCDC85CA6NKD9 419 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 NR1I2O75469 434 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 POU3F3P20264 500 aaPredicted RBP9.11□□□□□ -0.95
FBXO42-204ENST00000478089 SMARCA1P28370 1054 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 NOS2P35228 1153 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 TRIM29Q14134 588 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 BRD3Q15059 726 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 TKFCQ3LXA3 575 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 PPP4R4Q6NUP7 873 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 C14orf80Q86SX3 495 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 VPS37DQ86XT2 251 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 TATDN2Q93075 761 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 TRIM6Q9C030 488 aaPredicted RBP9.11□□□□□ -0.95
FBXO42-204ENST00000478089 PPCSQ9HAB8 311 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 PTPRHQ9HD43 1115 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 HDAC9Q9UKV0 1011 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 KIF20BQ96Q89 1820 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 KRT18P05783 430 aaKnown RBP9.11□□□□□ -0.95
FBXO42-204ENST00000478089 GSCP56915 257 aaPredicted RBP9.11□□□□□ -0.95
FBXO42-204ENST00000478089 RBM6P78332 1123 aaKnown RBP9.11□□□□□ -0.95
FBXO42-204ENST00000478089 ANKRD45Q5TZF3 282 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 AGAP9Q5VTM2 703 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 ALKBH2Q6NS38 261 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 LILRB2Q8N423 598 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 IWS1Q96ST2 819 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 VEZTQ9HBM0 779 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 ASAP1Q9ULH1 1129 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 UBR1Q8IWV7 1749 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 ATP7BP35670 1465 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 MMEP08473 750 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 CCDC159P0C7I6 412 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 CDC27P30260 824 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 HOXA10P31260 410 aaPredicted RBP9.11□□□□□ -0.95
FBXO42-204ENST00000478089 SYNE3Q6ZMZ3 975 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.11□□□□□ -0.95
FBXO42-204ENST00000478089 SYAP1Q96A49 352 aaPredicted RBP9.11□□□□□ -0.95
FBXO42-204ENST00000478089 CDK19Q9BWU1 502 aa9.11□□□□□ -0.95
FBXO42-204ENST00000478089 ESF1Q9H501 851 aaKnown RBP9.11□□□□□ -0.95
FBXO42-204ENST00000478089 ADGRB2O60241 1585 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 TNRQ92752 1358 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 DYNC1I1O14576 645 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 TSPAN7P41732 249 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 HDGFP51858 240 aaKnown RBP9.1□□□□□ -0.95
FBXO42-204ENST00000478089 CHAF1AQ13111 956 aaPredicted RBP9.1□□□□□ -0.95
FBXO42-204ENST00000478089 PAK2Q13177 524 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 NFXL1Q6ZNB6 911 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 GABPB2Q8TAK5 448 aaPredicted RBP9.1□□□□□ -0.95
FBXO42-204ENST00000478089 MAP3K14Q99558 947 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 KMT5AQ9NQR1 393 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 COL3A1P02461 1466 aaPredicted RBP9.1□□□□□ -0.95
FBXO42-204ENST00000478089 TECPR2O15040 1411 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 GPR182O15218 404 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 VAMP4O75379 141 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 ALDH1L1O75891 902 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 FDX1P10109 184 aa9.1□□□□□ -0.95
FBXO42-204ENST00000478089 SESN3P58005 492 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms