RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 GOLGA2P5Q9HBQ8 144 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 PRM3Q9NNZ6 103 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 NDUFB9Q9Y6M9 179 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 KDM3BQ7LBC6 1761 aa6.1□□□□□ -1.43
SF3B6-202ENST00000478050 DCCP43146 1447 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 INHAP05111 366 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 GDF10P55107 478 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 LAMC2Q13753 1193 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 GRIK4Q16099 956 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 SLFNL1Q499Z3 407 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 SIRT2Q8IXJ6 389 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 RETREG2Q8NC44 543 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 DDX17Q92841 729 aaKnown RBP6.09□□□□□ -1.43
SF3B6-202ENST00000478050 ZIC5Q96T25 663 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 SYT17Q9BSW7 474 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 TRAIPQ9BWF2 469 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 HCN2Q9UL51 889 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 TBC1D2BQ9UPU7 963 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 LMO7Q8WWI1 1683 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 GLI3P10071 1580 aa6.09□□□□□ -1.43
SF3B6-202ENST00000478050 PXDNLA1KZ92 1463 aa6.09□□□□□ -1.44
SF3B6-202ENST00000478050 RGPD2P0DJD1 1756 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 POM121CA8CG34 1229 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 C9orf172C9J069 976 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 HYAL3O43820 417 aaPredicted RBP6.08□□□□□ -1.44
SF3B6-202ENST00000478050 HMMRO75330 724 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 H2AFB1P0C5Y9 115 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 H2AFB2P0C5Z0 115 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 AMPHP49418 695 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 CCT4P50991 539 aaKnown RBP6.08□□□□□ -1.44
SF3B6-202ENST00000478050 SMTNP53814 917 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 TSGA10IPQ3SY00 556 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 MCM10Q7L590 875 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 CAMKK2Q96RR4 588 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 BABAM1Q9NWV8 329 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 TSPYL4Q9UJ04 414 aa6.08□□□□□ -1.44
SF3B6-202ENST00000478050 HSP90AB1P08238 724 aaKnown RBP6.07□□□□□ -1.44
SF3B6-202ENST00000478050 PTMSP20962 102 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 MCM4P33991 863 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 MTHFSDQ2M296 383 aaKnown RBP6.07□□□□□ -1.44
SF3B6-202ENST00000478050 TRAPPC3LQ5T215 181 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 L1TD1Q5T7N2 865 aaKnown RBP6.07□□□□□ -1.44
SF3B6-202ENST00000478050 TTC22Q5TAA0 569 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 SAMD5Q5TGI4 173 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 CEP85Q6P2H3 762 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 PLEKHM2Q8IWE5 1019 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 GLMNQ92990 594 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 NEUROD4Q9HD90 331 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 STRN4Q9NRL3 753 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 ZDHHC3Q9NYG2 299 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 SERTAD1Q9UHV2 236 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.07□□□□□ -1.44
SF3B6-202ENST00000478050 UTRNP46939 3433 aa6.07□□□□□ -1.44
SF3B6-202ENST00000478050 MAP3K5Q99683 1374 aa6.06□□□□□ -1.44
SF3B6-202ENST00000478050 NFAT5O94916 1531 aa6.06□□□□□ -1.44
SF3B6-202ENST00000478050 GNAT3A8MTJ3 354 aa6.06□□□□□ -1.44
SF3B6-202ENST00000478050 SIN3BO75182 1162 aa6.06□□□□□ -1.44
SF3B6-202ENST00000478050 SCNN1DP51172 638 aa6.06□□□□□ -1.44
SF3B6-202ENST00000478050 KRT24Q2M2I5 525 aa6.06□□□□□ -1.44
SF3B6-202ENST00000478050 CASC1Q6TDU7 716 aa6.06□□□□□ -1.44
SF3B6-202ENST00000478050 STK31Q9BXU1 1019 aa6.06□□□□□ -1.44
SF3B6-202ENST00000478050 PRDM6Q9NQX0 595 aa6.06□□□□□ -1.44
SF3B6-202ENST00000478050 MST1RQ04912 1400 aa6.06□□□□□ -1.44
SF3B6-202ENST00000478050 SIPA1L3O60292 1781 aaPredicted RBP6.06□□□□□ -1.44
SF3B6-202ENST00000478050 SHANK3Q9BYB0 1731 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 KIF1AQ12756 1690 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 ADARB2-AS1A8MUL3 147 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 CDK2AP1O14519 115 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 EFSO43281 561 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 GSPT1P15170 499 aaKnown RBP6.05□□□□□ -1.44
SF3B6-202ENST00000478050 HOXC9P31274 260 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 DDIT3P35638 169 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 RABEP1Q15276 862 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 VPS72Q15906 364 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 CCDC30Q5VVM6 783 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 MICALL1Q8N3F8 863 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 DNAJC5GQ8N7S2 189 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 GBP4Q96PP9 640 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 KIF2CQ99661 725 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 MEIS3Q99687 375 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 CHMP4AQ9BY43 222 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 ADGRL3Q9HAR2 1447 aa6.05□□□□□ -1.44
SF3B6-202ENST00000478050 FOXO3O43524 673 aa6.04□□□□□ -1.44
SF3B6-202ENST00000478050 TRIM37O94972 964 aa6.04□□□□□ -1.44
SF3B6-202ENST00000478050 ALBP02768 609 aa6.04□□□□□ -1.44
SF3B6-202ENST00000478050 GNAI2P04899 355 aa6.04□□□□□ -1.44
SF3B6-202ENST00000478050 GNAI3P08754 354 aa6.04□□□□□ -1.44
SF3B6-202ENST00000478050 C8orf86Q6ZUL3 223 aa6.04□□□□□ -1.44
SF3B6-202ENST00000478050 PHTF2Q8N3S3 785 aa6.04□□□□□ -1.44
SF3B6-202ENST00000478050 ISY1Q9ULR0 285 aaKnown RBP6.04□□□□□ -1.44
SF3B6-202ENST00000478050 TRPM3Q9HCF6 1732 aaPredicted RBP6.04□□□□□ -1.44
SF3B6-202ENST00000478050 SLIT3O75094 1523 aa6.04□□□□□ -1.44
SF3B6-202ENST00000478050 OVOS2A0A0G2JMS6 1433 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 NCAPD2Q15021 1401 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 TNS2Q63HR2 1409 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 A6NJY4 79 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 GPR37L1O60883 481 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 REC8O95072 547 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 ZBTB7AO95365 584 aa6.03□□□□□ -1.44
SF3B6-202ENST00000478050 HSP90AA1P07900 732 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms