RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 UVSSAQ2YD98 709 aa4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 PDZD3Q86UT5 571 aa4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 C12orf50Q8NA57 414 aaPredicted RBP4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 SMG8Q8ND04 991 aaKnown RBP4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 MICAL1Q8TDZ2 1067 aa4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 SSBP4Q9BWG4 385 aaPredicted RBP4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 TPSG1Q9NRR2 321 aa4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 KRT82Q9NSB4 513 aa4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 KIAA1522Q9P206 1035 aaPredicted RBP4.6□□□□□ -1.67
FNDC3B-209ENST00000478016 SART1O43290 800 aaKnown RBP4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 PPFIA4O75335 1185 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 PAGE1O75459 146 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 CTSBP07858 339 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 RLBP1P12271 317 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 LRRC14Q15048 493 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 PCNX4Q63HM2 1172 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 USP31Q70CQ4 1352 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 APBB1IPQ7Z5R6 666 aaPredicted RBP4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 STK35Q8TDR2 534 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 MORC4Q8TE76 937 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 UBXN4Q92575 508 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 KCNB2Q92953 911 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 TP53INP1Q96A56 240 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 FAM46AQ96IP4 442 aaKnown RBP4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 UBL7Q96S82 380 aaPredicted RBP4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 MTA3Q9BTC8 594 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 NOC4LQ9BVI4 516 aaKnown RBP4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 ZC3H12CQ9C0D7 883 aaKnown RBP4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 CCDC86Q9H6F5 360 aaKnown RBP4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 CBX8Q9HC52 389 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 RAD18Q9NS91 495 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 CYP8B1Q9UNU6 501 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 RPS6KL1Q9Y6S9 549 aa4.59□□□□□ -1.67
FNDC3B-209ENST00000478016 SYNGAP1Q96PV0 1343 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 TTC36A6NLP5 189 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 GAS2O43903 313 aaKnown RBP4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 EIF3JO75822 258 aaKnown RBP4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 TIAF1O95411 115 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 SLFN14P0C7P3 912 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 ADH5P11766 374 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 BMP6P22004 513 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 CALRP27797 417 aaKnown RBP4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 PREPP48147 710 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 ZNF252P-AS1Q0IIN9 211 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 DOC2BQ14184 412 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 LONRF3Q496Y0 759 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 MAP1SQ66K74 1059 aaPredicted RBP4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 SCARA3Q6AZY7 606 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 TTBK2Q6IQ55 1244 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 LLGL2Q6P1M3 1020 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 RINLQ6ZS11 566 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 NBPF11Q86T75 865 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 MKL1Q969V6 931 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 UTP4Q969X6 686 aaKnown RBP4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 WDR18Q9BV38 432 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 MAF1Q9H063 256 aa4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 METTL14Q9HCE5 456 aaKnown RBP4.58□□□□□ -1.68
FNDC3B-209ENST00000478016 DHX15O43143 795 aaKnown RBP4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 ZNF862O60290 1169 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 AOC2O75106 756 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 TRIM37O94972 964 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 DRD2P14416 443 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 LIG1P18858 919 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 LMNB1P20700 586 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 VAMP1P23763 118 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 RPS26P62854 115 aaKnown RBP4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 SOX4Q06945 474 aaPredicted RBP4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 KIF4BQ2VIQ3 1234 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 AKAP4Q5JQC9 854 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 CLEC4GQ6UXB4 293 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 KRBA2Q6ZNG9 492 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 GRIN3AQ8TCU5 1115 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 ACSBG1Q96GR2 724 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 MYRFLQ96LU7 910 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 JADE2Q9NQC1 790 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 AP4E1Q9UPM8 1137 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 HIF3AQ9Y2N7 669 aa4.57□□□□□ -1.68
FNDC3B-209ENST00000478016 DCAF1Q9Y4B6 1507 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 RAB11FIP3O75154 756 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 H2AFB1P0C5Y9 115 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 H2AFB2P0C5Z0 115 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 LIG3P49916 1009 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 MAP3K11Q16584 847 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 NKAPLQ5M9Q1 402 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 RASIP1Q5U651 963 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 AGMOQ6ZNB7 445 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 ARMC10Q8N2F6 343 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 TMEM87AQ8NBN3 555 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 C2CD4AQ8NCU7 369 aaPredicted RBP4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 GPBAR1Q8TDU6 330 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 WDR89Q96FK6 387 aaPredicted RBP4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 CHMP4BQ9H444 224 aaKnown RBP4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 CACNA2D2Q9NY47 1150 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 NOP58Q9Y2X3 529 aaKnown RBP4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 CC2D2AQ9P2K1 1620 aa4.56□□□□□ -1.68
FNDC3B-209ENST00000478016 FURINP09958 794 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 BMP3P12645 472 aa4.55□□□□□ -1.68
FNDC3B-209ENST00000478016 USP11P51784 963 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms