RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 STX1AQ16623 288 aa14.21□□□□□ -0.14
PTPRF-212ENST00000477970 LCORLQ8N3X6 602 aa14.21□□□□□ -0.14
PTPRF-212ENST00000477970 FAM217BQ9NTX9 383 aaPredicted RBP14.21□□□□□ -0.14
PTPRF-212ENST00000477970 PCDHA7Q9UN72 937 aa14.21□□□□□ -0.14
PTPRF-212ENST00000477970 GOLGA6L6A8MZA4 724 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 CDC25BP30305 580 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 PPP2R5BQ15173 497 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 SARM1Q6SZW1 724 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 MFSD6Q6ZSS7 791 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 WASF1Q92558 559 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 U2AF2P26368 475 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTPRF-212ENST00000477970 TMEM67Q5HYA8 995 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 CKAP2LQ8IYA6 745 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 NKX2-3Q8TAU0 364 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 PIBF1Q8WXW3 757 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 ZSWIM5Q9P217 1185 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 SLC4A4Q9Y6R1 1079 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 FAM237AA0A1B0GTK4 181 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 KINO60870 393 aaKnown RBP14.2□□□□□ -0.14
PTPRF-212ENST00000477970 FMNL1O95466 1100 aaPredicted RBP14.2□□□□□ -0.14
PTPRF-212ENST00000477970 IFNAR1P17181 557 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 PLA2G4DQ86XP0 818 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 MTFR1LQ9H019 292 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 MINPP1Q9UNW1 487 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 TACC3Q9Y6A5 838 aa14.2□□□□□ -0.14
PTPRF-212ENST00000477970 CCDC88AQ3V6T2 1871 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 PPP6R2O75170 966 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 FGRP09769 529 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 CDC27P30260 824 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 NT5C2P49902 561 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 SART3Q15020 963 aaKnown RBP14.19□□□□□ -0.14
PTPRF-212ENST00000477970 FBXO33Q7Z6M2 555 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 ALG1Q9BT22 464 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 BRIP1Q9BX63 1249 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 FTOQ9C0B1 505 aaKnown RBP eCLIP14.19□□□□□ -0.14
PTPRF-212ENST00000477970 TAF1P21675 1872 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 ME1P48163 572 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 GUCY1B3Q02153 619 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 CAVIN4Q5BKX8 364 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 ANO1Q5XXA6 986 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 SGIP1Q9BQI5 828 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 LRP2BPQ9P2M1 347 aa14.19□□□□□ -0.14
PTPRF-212ENST00000477970 MORC2Q9Y6X9 1032 aaPredicted RBP14.19□□□□□ -0.14
PTPRF-212ENST00000477970 GOLGA8AA7E2F4 631 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 SPTLC2O15270 562 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 ADRA2BP18089 450 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 TPRNQ4KMQ1 711 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 FSIP1Q8NA03 581 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 TIGD1Q96MW7 591 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 RIOK1Q9BRS2 568 aaKnown RBP14.18□□□□□ -0.14
PTPRF-212ENST00000477970 ANKRD2Q9GZV1 360 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 SPTLC3Q9NUV7 552 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 SLC12A7Q9Y666 1083 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 KIF28PB7ZC32 967 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 SNAP23O00161 211 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 ZNF165P49910 485 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 SLC39A14Q15043 492 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 IQCB1Q15051 598 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 C3orf67Q6ZVT6 689 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 NAP1L5Q96NT1 182 aaPredicted RBP14.18□□□□□ -0.14
PTPRF-212ENST00000477970 BPIFA3Q9BQP9 254 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 SPON1Q9HCB6 807 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 CLIC4Q9Y696 253 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 CCDC69A6NI79 296 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 IFIT3O14879 490 aaKnown RBP14.18□□□□□ -0.14
PTPRF-212ENST00000477970 CMA1P23946 247 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 IARSP41252 1262 aaKnown RBP14.18□□□□□ -0.14
PTPRF-212ENST00000477970 TDO2P48775 406 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 CTDSPL2Q05D32 466 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 STK38Q15208 465 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 TBC1D9BQ66K14 1250 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 SYNE3Q6ZMZ3 975 aa14.18□□□□□ -0.14
PTPRF-212ENST00000477970 TNRC6CQ9HCJ0 1690 aaKnown RBP14.17□□□□□ -0.14
PTPRF-212ENST00000477970 MAGEB6P1A0A0J9YX57 407 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 RANBP6O60518 1105 aaKnown RBP14.17□□□□□ -0.14
PTPRF-212ENST00000477970 FOSBP53539 338 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 CEBPZQ03701 1054 aaKnown RBP14.17□□□□□ -0.14
PTPRF-212ENST00000477970 PPARAQ07869 468 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 KRT40Q6A162 431 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 LUZP1Q86V48 1076 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 ANO10Q9NW15 660 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 NRXN2Q9P2S2 1712 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 CCDC196A0A1B0GTZ2 297 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 CYP7A1P22680 504 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 AXDND1Q5T1B0 1012 aaPredicted RBP14.17□□□□□ -0.14
PTPRF-212ENST00000477970 ELOA2Q8IYF1 753 aaPredicted RBP14.17□□□□□ -0.14
PTPRF-212ENST00000477970 FAM84BQ96KN1 310 aaPredicted RBP14.17□□□□□ -0.14
PTPRF-212ENST00000477970 IRS2Q9Y4H2 1338 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 SSRP1Q08945 709 aaKnown RBP14.17□□□□□ -0.14
PTPRF-212ENST00000477970 NFXL1Q6ZNB6 911 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 SENP2Q9HC62 589 aa14.17□□□□□ -0.14
PTPRF-212ENST00000477970 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.17□□□□□ -0.14
PTPRF-212ENST00000477970 PRKAB2O43741 272 aa14.16□□□□□ -0.14
PTPRF-212ENST00000477970 PTGER2P43116 358 aa14.16□□□□□ -0.14
PTPRF-212ENST00000477970 VPS37DQ86XT2 251 aa14.16□□□□□ -0.14
PTPRF-212ENST00000477970 JMYQ8N9B5 988 aa14.16□□□□□ -0.14
PTPRF-212ENST00000477970 TFCP2L1Q9NZI6 479 aa14.16□□□□□ -0.14
PTPRF-212ENST00000477970 ZNF75DP51815 510 aa14.16□□□□□ -0.14
PTPRF-212ENST00000477970 WTAPQ15007 396 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms