RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CRISPLD2Q9H0B8 497 aa25.42■■□□□ 1.66
PDLIM1-202ENST00000477757 PHF20L1A8MW92 1017 aa25.41■■□□□ 1.66
PDLIM1-202ENST00000477757 PRDX5P30044 214 aa25.4■■□□□ 1.66
PDLIM1-202ENST00000477757 MNX1P50219 401 aaPredicted RBP25.4■■□□□ 1.66
PDLIM1-202ENST00000477757 SPINK5Q9NQ38 1064 aaPredicted RBP25.4■■□□□ 1.66
PDLIM1-202ENST00000477757 PICK1Q9NRD5 415 aa25.4■■□□□ 1.66
PDLIM1-202ENST00000477757 ZHX2Q9Y6X8 837 aa25.4■■□□□ 1.66
PDLIM1-202ENST00000477757 DOCK1Q14185 1865 aa25.39■■□□□ 1.66
PDLIM1-202ENST00000477757 PTPRAP18433 802 aa25.39■■□□□ 1.66
PDLIM1-202ENST00000477757 ZEB1P37275 1124 aaPredicted RBP25.39■■□□□ 1.66
PDLIM1-202ENST00000477757 GPR153Q6NV75 609 aa25.39■■□□□ 1.66
PDLIM1-202ENST00000477757 GDF15Q99988 308 aa25.39■■□□□ 1.66
PDLIM1-202ENST00000477757 AFG3L2Q9Y4W6 797 aa25.39■■□□□ 1.66
PDLIM1-202ENST00000477757 RFX7Q2KHR2 1363 aa25.39■■□□□ 1.65
PDLIM1-202ENST00000477757 SLC5A1P13866 664 aa25.38■■□□□ 1.65
PDLIM1-202ENST00000477757 BMP8BP34820 402 aa25.38■■□□□ 1.65
PDLIM1-202ENST00000477757 GADL1Q6ZQY3 521 aa25.38■■□□□ 1.65
PDLIM1-202ENST00000477757 ZFPM1Q8IX07 1006 aa25.38■■□□□ 1.65
PDLIM1-202ENST00000477757 SMCR8Q8TEV9 937 aaPredicted RBP25.38■■□□□ 1.65
PDLIM1-202ENST00000477757 LPIN2Q92539 896 aa25.38■■□□□ 1.65
PDLIM1-202ENST00000477757 PAWRQ96IZ0 340 aaKnown RBP25.38■■□□□ 1.65
PDLIM1-202ENST00000477757 USP40Q9NVE5 1235 aa25.38■■□□□ 1.65
PDLIM1-202ENST00000477757 SALL2Q9Y467 1007 aaPredicted RBP25.38■■□□□ 1.65
PDLIM1-202ENST00000477757 PHIPQ8WWQ0 1821 aa25.37■■□□□ 1.65
PDLIM1-202ENST00000477757 NECAB2Q7Z6G3 386 aa25.37■■□□□ 1.65
PDLIM1-202ENST00000477757 DIS3LQ8TF46 1054 aaKnown RBP25.37■■□□□ 1.65
PDLIM1-202ENST00000477757 LDHBP07195 334 aaKnown RBP25.36■■□□□ 1.65
PDLIM1-202ENST00000477757 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.36■■□□□ 1.657e-7■■□□□ 14.1
PDLIM1-202ENST00000477757 SALL1Q9NSC2 1324 aa25.36■■□□□ 1.65
PDLIM1-202ENST00000477757 ANKLE1Q8NAG6 615 aa25.35■■□□□ 1.65
PDLIM1-202ENST00000477757 IDI2Q9BXS1 227 aa25.35■■□□□ 1.65
PDLIM1-202ENST00000477757 EYA2O00167 538 aa25.34■■□□□ 1.65
PDLIM1-202ENST00000477757 ENTPD3O75355 529 aa25.34■■□□□ 1.65
PDLIM1-202ENST00000477757 RGS3P49796 1198 aa25.34■■□□□ 1.65
PDLIM1-202ENST00000477757 COA7Q96BR5 231 aa25.34■■□□□ 1.65
PDLIM1-202ENST00000477757 TAOK2Q9UL54 1235 aa25.34■■□□□ 1.65
PDLIM1-202ENST00000477757 AGTPBP1Q9UPW5 1226 aa25.34■■□□□ 1.65
PDLIM1-202ENST00000477757 UNC80Q8N2C7 3258 aa25.34■■□□□ 1.65
PDLIM1-202ENST00000477757 MAP3K10Q02779 954 aa25.33■■□□□ 1.65
PDLIM1-202ENST00000477757 C7orf61Q8IZ16 206 aa25.33■■□□□ 1.65
PDLIM1-202ENST00000477757 TRIM75PA6NK02 468 aa25.32■■□□□ 1.64
PDLIM1-202ENST00000477757 RFX5P48382 616 aaPredicted RBP25.32■■□□□ 1.64
PDLIM1-202ENST00000477757 FAM110CQ1W6H9 321 aa25.32■■□□□ 1.64
PDLIM1-202ENST00000477757 SH3BP5LQ7L8J4 393 aa25.32■■□□□ 1.64
PDLIM1-202ENST00000477757 DEFB123Q8N688 67 aa25.32■■□□□ 1.64
PDLIM1-202ENST00000477757 ANKRD13CQ8N6S4 541 aa25.32■■□□□ 1.64
PDLIM1-202ENST00000477757 LRRFIP2Q9Y608 721 aaKnown RBP25.32■■□□□ 1.64
PDLIM1-202ENST00000477757 GAKO14976 1311 aa25.32■■□□□ 1.64
PDLIM1-202ENST00000477757 LOC285556D6RIA3 1793 aa25.31■■□□□ 1.64
PDLIM1-202ENST00000477757 CTNND1O60716 968 aaKnown RBP25.31■■□□□ 1.64
PDLIM1-202ENST00000477757 ZMYND8Q9ULU4 1186 aaPredicted RBP25.31■■□□□ 1.64
PDLIM1-202ENST00000477757 DDX60LQ5H9U9 1706 aaKnown RBP25.3■■□□□ 1.64
PDLIM1-202ENST00000477757 HMGCRP04035 888 aa25.3■■□□□ 1.64
PDLIM1-202ENST00000477757 LRIT3Q3SXY7 679 aa25.3■■□□□ 1.64
PDLIM1-202ENST00000477757 ATG9AQ7Z3C6 839 aa25.3■■□□□ 1.64
PDLIM1-202ENST00000477757 GNL3LQ9NVN8 582 aaKnown RBP25.3■■□□□ 1.64
PDLIM1-202ENST00000477757 PNMA3Q9UL41 463 aa25.3■■□□□ 1.64
PDLIM1-202ENST00000477757 STXBP5LQ9Y2K9 1186 aa25.3■■□□□ 1.64
PDLIM1-202ENST00000477757 DOCK3Q8IZD9 2030 aa25.29■■□□□ 1.64
PDLIM1-202ENST00000477757 SEMA3EO15041 775 aa25.29■■□□□ 1.64
PDLIM1-202ENST00000477757 ZSCAN29Q8IWY8 852 aaPredicted RBP25.29■■□□□ 1.64
PDLIM1-202ENST00000477757 USP44Q9H0E7 712 aa25.29■■□□□ 1.64
PDLIM1-202ENST00000477757 MYH2Q9UKX2 1941 aa25.29■■□□□ 1.64
PDLIM1-202ENST00000477757 DDTLA6NHG4 134 aaPredicted RBP25.28■■□□□ 1.64
PDLIM1-202ENST00000477757 ATP2B3Q16720 1220 aa25.28■■□□□ 1.64
PDLIM1-202ENST00000477757 TREML2Q5T2D2 321 aa25.28■■□□□ 1.64
PDLIM1-202ENST00000477757 Q7L0L9 218 aa25.28■■□□□ 1.64
PDLIM1-202ENST00000477757 NBPF3Q9H094 633 aa25.28■■□□□ 1.64
PDLIM1-202ENST00000477757 MRS2Q9HD23 443 aa25.28■■□□□ 1.64
PDLIM1-202ENST00000477757 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.28■■□□□ 1.64
PDLIM1-202ENST00000477757 DENND2AQ9ULE3 1009 aa25.28■■□□□ 1.64
PDLIM1-202ENST00000477757 PTPRCP08575 1304 aa25.28■■□□□ 1.64
PDLIM1-202ENST00000477757 ZBTB22O15209 634 aa25.27■■□□□ 1.64
PDLIM1-202ENST00000477757 SLURP2P0DP57 97 aa25.27■■□□□ 1.64
PDLIM1-202ENST00000477757 PROCA1Q8NCQ7 364 aaPredicted RBP25.27■■□□□ 1.64
PDLIM1-202ENST00000477757 DDX4Q9NQI0 724 aaKnown RBP25.27■■□□□ 1.64
PDLIM1-202ENST00000477757 MAGEA10P43363 369 aaPredicted RBP25.26■■□□□ 1.63
PDLIM1-202ENST00000477757 CCDC84Q86UT8 332 aaPredicted RBP25.26■■□□□ 1.63
PDLIM1-202ENST00000477757 TDHQ8IZJ6 230 aa25.26■■□□□ 1.63
PDLIM1-202ENST00000477757 RPTORQ8N122 1335 aa25.26■■□□□ 1.63
PDLIM1-202ENST00000477757 PHKA1P46020 1223 aa25.25■■□□□ 1.63
PDLIM1-202ENST00000477757 GCLCP48506 637 aaPredicted RBP25.25■■□□□ 1.63
PDLIM1-202ENST00000477757 ZGPATQ8N5A5 531 aaKnown RBP25.25■■□□□ 1.63
PDLIM1-202ENST00000477757 MRPL50Q8N5N7 158 aaKnown RBP25.25■■□□□ 1.63
PDLIM1-202ENST00000477757 HMX1Q9NP08 348 aaPredicted RBP25.25■■□□□ 1.63
PDLIM1-202ENST00000477757 FBXO3Q9UK99 471 aa25.25■■□□□ 1.63
PDLIM1-202ENST00000477757 CIAO1O76071 339 aa25.24■■□□□ 1.63
PDLIM1-202ENST00000477757 SYN1P17600 705 aa25.24■■□□□ 1.63
PDLIM1-202ENST00000477757 C11orf49Q9H6J7 331 aa25.24■■□□□ 1.63
PDLIM1-202ENST00000477757 MTMR10Q9NXD2 777 aa25.24■■□□□ 1.63
PDLIM1-202ENST00000477757 TRIM32Q13049 653 aa25.23■■□□□ 1.63
PDLIM1-202ENST00000477757 DZIP1Q86YF9 867 aaKnown RBP25.23■■□□□ 1.63
PDLIM1-202ENST00000477757 GJD2Q9UKL4 321 aa25.23■■□□□ 1.63
PDLIM1-202ENST00000477757 PDS5AQ29RF7 1337 aaKnown RBP25.22■■□□□ 1.63
PDLIM1-202ENST00000477757 PLXNB2O15031 1838 aa25.22■■□□□ 1.63
PDLIM1-202ENST00000477757 TBC1D12O60347 775 aa25.22■■□□□ 1.63
PDLIM1-202ENST00000477757 PICALMQ13492 652 aa25.22■■□□□ 1.63
PDLIM1-202ENST00000477757 SLF2Q8IX21 1173 aa25.22■■□□□ 1.63
PDLIM1-202ENST00000477757 FAM163AQ96GL9 167 aaPredicted RBP25.22■■□□□ 1.63
PDLIM1-202ENST00000477757 SIL1Q9H173 461 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms