RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 IL22RA1Q8N6P7 574 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 SCG3Q8WXD2 468 aaKnown RBP6.78□□□□□ -1.32
CKS1B-207ENST00000477676 POM121Q96HA1 1249 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 ZNF594Q96JF6 807 aaPredicted RBP6.78□□□□□ -1.32
CKS1B-207ENST00000477676 HINFPQ9BQA5 517 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.78□□□□□ -1.32
CKS1B-207ENST00000477676 POGKQ9P215 609 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 ADGRE2Q9UHX3 823 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 KIAA0232Q92628 1395 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 PARP4Q9UKK3 1724 aaKnown RBP6.78□□□□□ -1.32
CKS1B-207ENST00000477676 WNK3Q9BYP7 1800 aa6.78□□□□□ -1.32
CKS1B-207ENST00000477676 SPATA31A1Q5TZJ5 1347 aa6.77□□□□□ -1.32
CKS1B-207ENST00000477676 COL18A1P39060 1754 aa6.77□□□□□ -1.33
CKS1B-207ENST00000477676 TRIM37O94972 964 aa6.77□□□□□ -1.33
CKS1B-207ENST00000477676 EIF2AK2P19525 551 aaKnown RBP6.77□□□□□ -1.33
CKS1B-207ENST00000477676 NRLP54845 237 aa6.77□□□□□ -1.33
CKS1B-207ENST00000477676 NFIAQ12857 509 aa6.77□□□□□ -1.33
CKS1B-207ENST00000477676 GDF6Q6KF10 455 aaPredicted RBP6.77□□□□□ -1.33
CKS1B-207ENST00000477676 ARMC10Q8N2F6 343 aa6.77□□□□□ -1.33
CKS1B-207ENST00000477676 PLD4Q96BZ4 506 aa6.77□□□□□ -1.33
CKS1B-207ENST00000477676 PRR19A6NJB7 356 aa6.76□□□□□ -1.33
CKS1B-207ENST00000477676 J3QW42 95 aa6.76□□□□□ -1.33
CKS1B-207ENST00000477676 IDH3AP50213 366 aa6.76□□□□□ -1.33
CKS1B-207ENST00000477676 NUTM2GQ5VZR2 741 aa6.76□□□□□ -1.33
CKS1B-207ENST00000477676 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.76□□□□□ -1.33
CKS1B-207ENST00000477676 VTI1AQ96AJ9 217 aa6.76□□□□□ -1.33
CKS1B-207ENST00000477676 NUDT16Q96DE0 195 aaKnown RBP6.76□□□□□ -1.33
CKS1B-207ENST00000477676 SRA1Q9HD15 236 aaKnown RBP6.76□□□□□ -1.33
CKS1B-207ENST00000477676 PRDM11Q9NQV5 511 aa6.76□□□□□ -1.33
CKS1B-207ENST00000477676 GPRASP1Q5JY77 1395 aa6.76□□□□□ -1.33
CKS1B-207ENST00000477676 RAB3GAP2Q9H2M9 1393 aa6.76□□□□□ -1.33
CKS1B-207ENST00000477676 CASZ1Q86V15 1759 aa6.76□□□□□ -1.33
CKS1B-207ENST00000477676 KIAA1210Q9ULL0 1709 aa6.76□□□□□ -1.33
CKS1B-207ENST00000477676 SSH2Q76I76 1423 aa6.76□□□□□ -1.33
CKS1B-207ENST00000477676 KAT6BQ8WYB5 2073 aa6.75□□□□□ -1.33
CKS1B-207ENST00000477676 POM121CA8CG34 1229 aa6.75□□□□□ -1.33
CKS1B-207ENST00000477676 DKK1O94907 266 aa6.75□□□□□ -1.33
CKS1B-207ENST00000477676 ZC3H6P61129 1189 aaKnown RBP6.75□□□□□ -1.33
CKS1B-207ENST00000477676 RNF43Q68DV7 783 aa6.75□□□□□ -1.33
CKS1B-207ENST00000477676 MAP4K3Q8IVH8 894 aa6.75□□□□□ -1.33
CKS1B-207ENST00000477676 TRIM42Q8IWZ5 723 aa6.75□□□□□ -1.33
CKS1B-207ENST00000477676 NGDNQ8NEJ9 315 aaKnown RBP6.75□□□□□ -1.33
CKS1B-207ENST00000477676 C7orf69Q9H7B7 122 aa6.75□□□□□ -1.33
CKS1B-207ENST00000477676 C11orf16Q9NQ32 467 aa6.75□□□□□ -1.33
CKS1B-207ENST00000477676 TLR7Q9NYK1 1049 aaKnown RBP6.75□□□□□ -1.33
CKS1B-207ENST00000477676 RGPD3A6NKT7 1758 aaPredicted RBP6.74□□□□□ -1.33
CKS1B-207ENST00000477676 RGPD4Q7Z3J3 1758 aa6.74□□□□□ -1.33
CKS1B-207ENST00000477676 POLR3AO14802 1390 aaPredicted RBP6.74□□□□□ -1.33
CKS1B-207ENST00000477676 LOC102724428A0A0B4J2F2 783 aa6.74□□□□□ -1.33
CKS1B-207ENST00000477676 SIK1P57059 783 aa6.74□□□□□ -1.33
CKS1B-207ENST00000477676 DCAF11Q8TEB1 546 aa6.74□□□□□ -1.33
CKS1B-207ENST00000477676 KLK14Q9P0G3 267 aa6.74□□□□□ -1.33
CKS1B-207ENST00000477676 LRRC37A3O60309 1634 aa6.74□□□□□ -1.33
CKS1B-207ENST00000477676 AKAP12Q02952 1782 aa6.74□□□□□ -1.33
CKS1B-207ENST00000477676 ACEP12821 1306 aa6.74□□□□□ -1.33
CKS1B-207ENST00000477676 EIF3AQ14152 1382 aaKnown RBP6.73□□□□□ -1.33
CKS1B-207ENST00000477676 HMX2A2RU54 273 aa6.73□□□□□ -1.33
CKS1B-207ENST00000477676 ARSDP51689 593 aa6.73□□□□□ -1.33
CKS1B-207ENST00000477676 NBPF8Q3BBV2 869 aa6.73□□□□□ -1.33
CKS1B-207ENST00000477676 OGFOD2Q6N063 350 aa6.73□□□□□ -1.33
CKS1B-207ENST00000477676 FAM196AQ6ZSG2 479 aa6.73□□□□□ -1.33
CKS1B-207ENST00000477676 PTF1AQ7RTS3 328 aa6.73□□□□□ -1.33
CKS1B-207ENST00000477676 CALR3Q96L12 384 aaKnown RBP6.73□□□□□ -1.33
CKS1B-207ENST00000477676 CDK19Q9BWU1 502 aa6.73□□□□□ -1.33
CKS1B-207ENST00000477676 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
CKS1B-207ENST00000477676 TFIP11Q9UBB9 837 aaKnown RBP6.73□□□□□ -1.33
CKS1B-207ENST00000477676 CHD4Q14839 1912 aa6.73□□□□□ -1.33
CKS1B-207ENST00000477676 PIK3C2AO00443 1686 aa6.73□□□□□ -1.33
CKS1B-207ENST00000477676 USP19O94966 1318 aa6.73□□□□□ -1.33
CKS1B-207ENST00000477676 COL5A2P05997 1499 aaPredicted RBP6.73□□□□□ -1.33
CKS1B-207ENST00000477676 QRICH2Q9H0J4 1663 aa6.72□□□□□ -1.33
CKS1B-207ENST00000477676 GLMNQ92990 594 aa6.72□□□□□ -1.33
CKS1B-207ENST00000477676 UCN2Q96RP3 112 aa6.72□□□□□ -1.33
CKS1B-207ENST00000477676 DBNDD2Q9BQY9 259 aa6.72□□□□□ -1.33
CKS1B-207ENST00000477676 PDGFDQ9GZP0 370 aaPredicted RBP6.72□□□□□ -1.33
CKS1B-207ENST00000477676 MYOM1P52179 1685 aa6.71□□□□□ -1.33
CKS1B-207ENST00000477676 CPDO75976 1380 aa6.71□□□□□ -1.33
CKS1B-207ENST00000477676 PARD3Q8TEW0 1356 aa6.71□□□□□ -1.33
CKS1B-207ENST00000477676 MICAL2O94851 1124 aa6.71□□□□□ -1.34
CKS1B-207ENST00000477676 WISP1O95388 367 aa6.71□□□□□ -1.34
CKS1B-207ENST00000477676 IGFBP4P22692 258 aa6.71□□□□□ -1.34
CKS1B-207ENST00000477676 GALNT11Q8NCW6 608 aa6.71□□□□□ -1.34
CKS1B-207ENST00000477676 ADAMTS19Q8TE59 1207 aa6.71□□□□□ -1.34
CKS1B-207ENST00000477676 UTP4Q969X6 686 aaKnown RBP6.71□□□□□ -1.34
CKS1B-207ENST00000477676 CEP41Q9BYV8 373 aa6.71□□□□□ -1.34
CKS1B-207ENST00000477676 VRTNQ9H8Y1 702 aa6.71□□□□□ -1.34
CKS1B-207ENST00000477676 SLIT3O75094 1523 aa6.71□□□□□ -1.34
CKS1B-207ENST00000477676 GHRHP01286 108 aa6.7□□□□□ -1.34
CKS1B-207ENST00000477676 ABI1Q8IZP0 508 aa6.7□□□□□ -1.34
CKS1B-207ENST00000477676 TCP11L2Q8N4U5 519 aa6.7□□□□□ -1.34
CKS1B-207ENST00000477676 FAM46AQ96IP4 442 aaKnown RBP6.7□□□□□ -1.34
CKS1B-207ENST00000477676 TRIM33Q9UPN9 1127 aa6.7□□□□□ -1.34
CKS1B-207ENST00000477676 USP20Q9Y2K6 914 aa6.7□□□□□ -1.34
CKS1B-207ENST00000477676 PPME1Q9Y570 386 aa6.7□□□□□ -1.34
CKS1B-207ENST00000477676 MAFBQ9Y5Q3 323 aaPredicted RBP6.7□□□□□ -1.34
CKS1B-207ENST00000477676 OPLAHO14841 1288 aa6.69□□□□□ -1.34
CKS1B-207ENST00000477676 GCP02774 474 aa6.69□□□□□ -1.34
CKS1B-207ENST00000477676 C8AP07357 584 aa6.69□□□□□ -1.34
CKS1B-207ENST00000477676 PDE3BQ13370 1112 aa6.69□□□□□ -1.34
CKS1B-207ENST00000477676 UVSSAQ2YD98 709 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms