RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 DCP1AQ9NPI6 582 aaPredicted RBP19.35■□□□□ 0.69
VHL-203ENST00000477538 DDX4Q9NQI0 724 aaKnown RBP19.35■□□□□ 0.69
VHL-203ENST00000477538 GGA3Q9NZ52 723 aa19.35■□□□□ 0.69
VHL-203ENST00000477538 TCP10L2B9ZVM9 353 aa19.34■□□□□ 0.69
VHL-203ENST00000477538 SEC24BO95487 1268 aa19.34■□□□□ 0.69
VHL-203ENST00000477538 TDO2P48775 406 aa19.34■□□□□ 0.69
VHL-203ENST00000477538 ANGEL2Q5VTE6 544 aaKnown RBP19.34■□□□□ 0.69
VHL-203ENST00000477538 GIMAP6Q6P9H5 292 aa19.34■□□□□ 0.69
VHL-203ENST00000477538 BACH2Q9BYV9 841 aa19.34■□□□□ 0.69
VHL-203ENST00000477538 FAM198AQ9UFP1 575 aa19.34■□□□□ 0.69
VHL-203ENST00000477538 TRPM7Q96QT4 1865 aa19.33■□□□□ 0.69
VHL-203ENST00000477538 ZMYM6O95789 1325 aa19.33■□□□□ 0.69
VHL-203ENST00000477538 PITPNM2Q9BZ72 1349 aa19.33■□□□□ 0.69
VHL-203ENST00000477538 NPM3O75607 178 aaKnown RBP19.33■□□□□ 0.68
VHL-203ENST00000477538 TNNI2P48788 182 aa19.33■□□□□ 0.68
VHL-203ENST00000477538 TCP10Q12799 353 aa19.33■□□□□ 0.68
VHL-203ENST00000477538 TNFAIP1Q13829 316 aa19.33■□□□□ 0.68
VHL-203ENST00000477538 ALX1Q15699 326 aa19.33■□□□□ 0.68
VHL-203ENST00000477538 APOBEC3FQ8IUX4 373 aaKnown RBP19.33■□□□□ 0.68
VHL-203ENST00000477538 MAP4K1Q92918 833 aa19.33■□□□□ 0.68
VHL-203ENST00000477538 OSBPL5Q9H0X9 879 aaPredicted RBP19.33■□□□□ 0.68
VHL-203ENST00000477538 NAPBQ9H115 298 aa19.33■□□□□ 0.68
VHL-203ENST00000477538 MKRN1Q9UHC7 482 aaKnown RBP19.33■□□□□ 0.68
VHL-203ENST00000477538 COL2A1P02458 1487 aaPredicted RBP19.33■□□□□ 0.68
VHL-203ENST00000477538 CNTNAP1P78357 1384 aa19.32■□□□□ 0.68
VHL-203ENST00000477538 ENTPD3O75355 529 aa19.32■□□□□ 0.68
VHL-203ENST00000477538 FAM83AQ86UY5 434 aa19.32■□□□□ 0.68
VHL-203ENST00000477538 ZC3H15Q8WU90 426 aaKnown RBP19.32■□□□□ 0.68
VHL-203ENST00000477538 MCM9Q9NXL9 1143 aa19.32■□□□□ 0.68
VHL-203ENST00000477538 SAP30BPQ9UHR5 308 aaKnown RBP19.32■□□□□ 0.68
VHL-203ENST00000477538 U3KPZ7 1027 aaPredicted RBP19.32■□□□□ 0.68
VHL-203ENST00000477538 ATAD5Q96QE3 1844 aa19.32■□□□□ 0.68
VHL-203ENST00000477538 FGAP02671 866 aa19.31■□□□□ 0.68
VHL-203ENST00000477538 FAM151AQ8WW52 585 aa19.31■□□□□ 0.68
VHL-203ENST00000477538 DCPSQ96C86 337 aaKnown RBP19.31■□□□□ 0.68
VHL-203ENST00000477538 GPBP1L1Q9HC44 474 aaPredicted RBP19.31■□□□□ 0.68
VHL-203ENST00000477538 ARPP21Q9UBL0 812 aaPredicted RBP19.31■□□□□ 0.68
VHL-203ENST00000477538 SCAF8Q9UPN6 1271 aaKnown RBP19.31■□□□□ 0.68
VHL-203ENST00000477538 RBM8AQ9Y5S9 174 aaKnown RBP19.31■□□□□ 0.68
VHL-203ENST00000477538 EPB41L2O43491 1005 aaKnown RBP19.3■□□□□ 0.68
VHL-203ENST00000477538 ZFPM1Q8IX07 1006 aa19.3■□□□□ 0.68
VHL-203ENST00000477538 AMOTL1Q8IY63 956 aa19.3■□□□□ 0.68
VHL-203ENST00000477538 USP26Q9BXU7 913 aa19.3■□□□□ 0.68
VHL-203ENST00000477538 PGAP2Q9UHJ9 254 aa19.3■□□□□ 0.68
VHL-203ENST00000477538 CTNNA3Q9UI47 895 aa19.3■□□□□ 0.68
VHL-203ENST00000477538 CLEC11AQ9Y240 323 aa19.3■□□□□ 0.68
VHL-203ENST00000477538 USP17L12C9JPN9 530 aa19.29■□□□□ 0.68
VHL-203ENST00000477538 USP17L21D6R901 530 aa19.29■□□□□ 0.68
VHL-203ENST00000477538 POLR3DP05423 398 aaPredicted RBP19.29■□□□□ 0.68
VHL-203ENST00000477538 POTEIP0CG38 1075 aa19.29■□□□□ 0.68
VHL-203ENST00000477538 POTEJP0CG39 1038 aa19.29■□□□□ 0.68
VHL-203ENST00000477538 YY1P25490 414 aa19.29■□□□□ 0.68
VHL-203ENST00000477538 RASA3Q14644 834 aa19.29■□□□□ 0.68
VHL-203ENST00000477538 SBK1Q52WX2 424 aa19.29■□□□□ 0.68
VHL-203ENST00000477538 CTR9Q6PD62 1173 aa19.29■□□□□ 0.68
VHL-203ENST00000477538 ZSCAN29Q8IWY8 852 aaPredicted RBP19.29■□□□□ 0.68
VHL-203ENST00000477538 TMEM39BQ9GZU3 492 aa19.29■□□□□ 0.68
VHL-203ENST00000477538 PALD1Q9ULE6 856 aa19.29■□□□□ 0.68
VHL-203ENST00000477538 ATRNL1Q5VV63 1379 aa19.29■□□□□ 0.68
VHL-203ENST00000477538 MINDY4BA8MYZ0 360 aa19.28■□□□□ 0.68
VHL-203ENST00000477538 CYP2D6P10635 497 aa19.28■□□□□ 0.68
VHL-203ENST00000477538 SLC4A8Q2Y0W8 1093 aa19.28■□□□□ 0.68
VHL-203ENST00000477538 LDHDQ86WU2 507 aa19.28■□□□□ 0.68
VHL-203ENST00000477538 SULF1Q8IWU6 871 aa19.28■□□□□ 0.68
VHL-203ENST00000477538 DEFB129Q9H1M3 183 aa19.28■□□□□ 0.68
VHL-203ENST00000477538 DHX36Q9H2U1 1008 aaKnown RBP19.28■□□□□ 0.68
VHL-203ENST00000477538 CYP2D7A0A087X1C5 515 aa19.27■□□□□ 0.68
VHL-203ENST00000477538 DDTLA6NHG4 134 aaPredicted RBP19.27■□□□□ 0.68
VHL-203ENST00000477538 HLA-DOAP06340 250 aa19.27■□□□□ 0.68
VHL-203ENST00000477538 IMMTQ16891 758 aaKnown RBP19.27■□□□□ 0.68
VHL-203ENST00000477538 SH3BP5LQ7L8J4 393 aa19.27■□□□□ 0.68
VHL-203ENST00000477538 KRT26Q7Z3Y9 468 aa19.27■□□□□ 0.68
VHL-203ENST00000477538 TTC6Q86TZ1 520 aa19.27■□□□□ 0.68
VHL-203ENST00000477538 PPP2R3BQ9Y5P8 575 aa19.27■□□□□ 0.68
VHL-203ENST00000477538 HAND2P61296 217 aa19.26■□□□□ 0.67
VHL-203ENST00000477538 PPARAQ07869 468 aa19.26■□□□□ 0.67
VHL-203ENST00000477538 NECTIN1Q15223 517 aa19.26■□□□□ 0.67
VHL-203ENST00000477538 C12orf60Q5U649 245 aa19.26■□□□□ 0.67
VHL-203ENST00000477538 UPF2Q9HAU5 1272 aaKnown RBP19.26■□□□□ 0.67
VHL-203ENST00000477538 OTOFQ9HC10 1997 aa19.26■□□□□ 0.67
VHL-203ENST00000477538 ROBO3Q96MS0 1386 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 ADM5C9JUS6 153 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 ZNF213O14771 459 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 MCCP23508 829 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 HSPA4P34932 840 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 PLCD1P51178 756 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 EVX2Q03828 476 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 RNF20Q5VTR2 975 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 CREB3L3Q68CJ9 461 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 CDAN1Q8IWY9 1227 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 TEPSINQ96N21 525 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 CSRNP1Q96S65 589 aa19.25■□□□□ 0.67
VHL-203ENST00000477538 SMIM22K7EJ46 135 aa19.24■□□□□ 0.67
VHL-203ENST00000477538 SLC27A2O14975 620 aa19.24■□□□□ 0.67
VHL-203ENST00000477538 CYP21A2P08686 494 aa19.24■□□□□ 0.67
VHL-203ENST00000477538 CTDSPL2Q05D32 466 aa19.24■□□□□ 0.67
VHL-203ENST00000477538 MAP1SQ66K74 1059 aaPredicted RBP19.24■□□□□ 0.67
VHL-203ENST00000477538 CDC37L1Q7L3B6 337 aa19.24■□□□□ 0.67
VHL-203ENST00000477538 USP48Q86UV5 1035 aa19.24■□□□□ 0.67
VHL-203ENST00000477538 PI4KBQ9UBF8 816 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms