RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 GATA6Q92908 595 aa6□□□□□ -1.45
PTCD3-212ENST00000477520 MKNK1Q9BUB5 465 aa6□□□□□ -1.45
PTCD3-212ENST00000477520 METTL22Q9BUU2 404 aaPredicted RBP6□□□□□ -1.45
PTCD3-212ENST00000477520 SUGCTQ9HAC7 445 aa6□□□□□ -1.45
PTCD3-212ENST00000477520 DZANK1Q9NVP4 752 aa6□□□□□ -1.45
PTCD3-212ENST00000477520 NOVA2Q9UNW9 492 aaKnown RBP6□□□□□ -1.45
PTCD3-212ENST00000477520 LAS1LQ9Y4W2 734 aaKnown RBP6□□□□□ -1.45
PTCD3-212ENST00000477520 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6□□□□□ -1.45
PTCD3-212ENST00000477520 PTPN23Q9H3S7 1636 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 DENND4BO75064 1496 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-212ENST00000477520 ADGRL1O94910 1474 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 LOC100289279A0A1B0GTE1 492 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 PDE2AO00408 941 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-212ENST00000477520 TSPY4P0CV99 314 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 TSPY10P0CW01 314 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 IRX6P78412 446 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-212ENST00000477520 PDE3BQ13370 1112 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 CNGB1Q14028 1251 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-212ENST00000477520 PAOXQ6QHF9 649 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 ZAR1Q86SH2 424 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 C1orf127Q8N9H9 656 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 TRIM44Q96DX7 344 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-212ENST00000477520 TBC1D32Q96NH3 1257 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 USP26Q9BXU7 913 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 PRKAG2Q9UGJ0 569 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 PRDM4Q9UKN5 801 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 CCDC144AA2RUR9 1427 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 SCAPERQ9BY12 1400 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 CNTLNQ9NXG0 1405 aa5.99□□□□□ -1.45
PTCD3-212ENST00000477520 CAMSAP2Q08AD1 1489 aa5.98□□□□□ -1.45
PTCD3-212ENST00000477520 TCOF1Q13428 1488 aaKnown RBP5.98□□□□□ -1.45
PTCD3-212ENST00000477520 TONSLQ96HA7 1378 aa5.98□□□□□ -1.45
PTCD3-212ENST00000477520 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
PTCD3-212ENST00000477520 PTMSP20962 102 aa5.98□□□□□ -1.45
PTCD3-212ENST00000477520 MRE11P49959 708 aa5.98□□□□□ -1.45
PTCD3-212ENST00000477520 HNRNPMP52272 730 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTCD3-212ENST00000477520 SWI5Q1ZZU3 235 aa5.98□□□□□ -1.45
PTCD3-212ENST00000477520 FBLN7Q53RD9 439 aa5.98□□□□□ -1.45
PTCD3-212ENST00000477520 VN1R5Q7Z5H4 357 aa5.98□□□□□ -1.45
PTCD3-212ENST00000477520 WFDC3Q8IUB2 231 aa5.98□□□□□ -1.45
PTCD3-212ENST00000477520 C2CD4AQ8NCU7 369 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-212ENST00000477520 ANP32BQ92688 251 aaKnown RBP5.98□□□□□ -1.45
PTCD3-212ENST00000477520 ZC3H7BQ9UGR2 993 aaKnown RBP5.98□□□□□ -1.45
PTCD3-212ENST00000477520 ZNF644Q9H582 1327 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-212ENST00000477520 PPRC1Q5VV67 1664 aaKnown RBP5.98□□□□□ -1.45
PTCD3-212ENST00000477520 SAMD9LQ8IVG5 1584 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 ZNF518AQ6AHZ1 1483 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 KTN1Q86UP2 1357 aaKnown RBP5.97□□□□□ -1.45
PTCD3-212ENST00000477520 GOLGA6L3A6NEY3 463 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 KIF20AO95235 890 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 ARL4DP49703 201 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 USP11P51784 963 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 BECN1Q14457 450 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 PDE12Q6L8Q7 609 aaKnown RBP5.97□□□□□ -1.45
PTCD3-212ENST00000477520 AGBL5Q8NDL9 886 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 NUDT16Q96DE0 195 aaKnown RBP5.97□□□□□ -1.45
PTCD3-212ENST00000477520 CYP4F12Q9HCS2 524 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 RRAGDQ9NQL2 400 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-212ENST00000477520 STIM2Q9P246 746 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 ZMIZ1Q9ULJ6 1067 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 ABCC1P33527 1531 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 ARHGEF5Q12774 1597 aa5.97□□□□□ -1.45
PTCD3-212ENST00000477520 SPAG9O60271 1321 aaKnown RBP5.97□□□□□ -1.45
PTCD3-212ENST00000477520 CCDC141Q6ZP82 1450 aa5.96□□□□□ -1.45
PTCD3-212ENST00000477520 INSRP06213 1382 aa5.96□□□□□ -1.45
PTCD3-212ENST00000477520 SYCP2Q9BX26 1530 aa5.96□□□□□ -1.46
PTCD3-212ENST00000477520 RFX1P22670 979 aa5.96□□□□□ -1.46
PTCD3-212ENST00000477520 CANXP27824 592 aaKnown RBP5.96□□□□□ -1.46
PTCD3-212ENST00000477520 ZNF574Q6ZN55 896 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-212ENST00000477520 ZNF438Q7Z4V0 828 aa5.96□□□□□ -1.46
PTCD3-212ENST00000477520 ATCAYQ86WG3 371 aa5.96□□□□□ -1.46
PTCD3-212ENST00000477520 IPO4Q8TEX9 1081 aaKnown RBP5.96□□□□□ -1.46
PTCD3-212ENST00000477520 EZH1Q92800 747 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-212ENST00000477520 PRKRIP1Q9H875 184 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-212ENST00000477520 LRRC4CQ9HCJ2 640 aa5.96□□□□□ -1.46
PTCD3-212ENST00000477520 POGZQ7Z3K3 1410 aa5.96□□□□□ -1.46
PTCD3-212ENST00000477520 KDM6BO15054 1643 aa5.96□□□□□ -1.46
PTCD3-212ENST00000477520 FSD2A1L4K1 749 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 DBX1A6NMT0 343 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 RTEL1-TNFRSF6BF6WH68 1400 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 RAPGEF3O95398 923 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 CES1P23141 567 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 IKBKEQ14164 716 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-212ENST00000477520 ZNF765Q7L2R6 523 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 AFAP1Q8N556 730 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 STK32AQ8WU08 396 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 NXPE3Q969Y0 559 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 GTPBP4Q9BZE4 634 aaKnown RBP5.95□□□□□ -1.46
PTCD3-212ENST00000477520 CHRDQ9H2X0 955 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 CXXC1Q9P0U4 656 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-212ENST00000477520 TRAPPC8Q9Y2L5 1435 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 DNMT1P26358 1616 aaKnown RBP5.95□□□□□ -1.46
PTCD3-212ENST00000477520 MAGI2Q86UL8 1455 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 MBD5Q9P267 1494 aa5.95□□□□□ -1.46
PTCD3-212ENST00000477520 ANKRD30AQ9BXX3 1397 aa5.94□□□□□ -1.46
PTCD3-212ENST00000477520 RICTORQ6R327 1708 aa5.94□□□□□ -1.46
PTCD3-212ENST00000477520 ABCC5O15440 1437 aa5.94□□□□□ -1.46
PTCD3-212ENST00000477520 DAPK1P53355 1430 aa5.94□□□□□ -1.46
PTCD3-212ENST00000477520 C9orf84Q5VXU9 1444 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms