RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 TRIM6-TRIM34B2RNG4 842 aa15.82■□□□□ 0.12
TOP3A-205ENST00000477508 PDE4AP27815 886 aa15.82■□□□□ 0.12
TOP3A-205ENST00000477508 TTLL12Q14166 644 aaPredicted RBP15.82■□□□□ 0.12
TOP3A-205ENST00000477508 IFFO2Q5TF58 517 aa15.82■□□□□ 0.12
TOP3A-205ENST00000477508 DCAF15Q66K64 600 aa15.82■□□□□ 0.12
TOP3A-205ENST00000477508 SAPCD2Q86UD0 394 aa15.82■□□□□ 0.12
TOP3A-205ENST00000477508 APPBP2Q92624 585 aa15.82■□□□□ 0.12
TOP3A-205ENST00000477508 RIOK1Q9BRS2 568 aaKnown RBP15.82■□□□□ 0.12
TOP3A-205ENST00000477508 CRNKL1Q9BZJ0 848 aaKnown RBP15.82■□□□□ 0.12
TOP3A-205ENST00000477508 COL2A1P02458 1487 aaPredicted RBP15.82■□□□□ 0.12
TOP3A-205ENST00000477508 PAPPA2Q9BXP8 1791 aa15.82■□□□□ 0.12
TOP3A-205ENST00000477508 USP5P45974 858 aa15.81■□□□□ 0.12
TOP3A-205ENST00000477508 DYNLL1P63167 89 aaKnown RBP15.81■□□□□ 0.12
TOP3A-205ENST00000477508 PICALMQ13492 652 aa15.81■□□□□ 0.12
TOP3A-205ENST00000477508 ZSCAN29Q8IWY8 852 aaPredicted RBP15.81■□□□□ 0.12
TOP3A-205ENST00000477508 TGFBRAP1Q8WUH2 860 aa15.81■□□□□ 0.12
TOP3A-205ENST00000477508 AIDAQ96BJ3 306 aa15.81■□□□□ 0.12
TOP3A-205ENST00000477508 DHX36Q9H2U1 1008 aaKnown RBP15.81■□□□□ 0.12
TOP3A-205ENST00000477508 AK9Q5TCS8 1911 aa15.8■□□□□ 0.12
TOP3A-205ENST00000477508 ATRNL1Q5VV63 1379 aa15.8■□□□□ 0.12
TOP3A-205ENST00000477508 RASSF10A6NK89 507 aa15.8■□□□□ 0.12
TOP3A-205ENST00000477508 IREB2P48200 963 aaKnown RBP15.8■□□□□ 0.12
TOP3A-205ENST00000477508 HUNKP57058 714 aa15.8■□□□□ 0.12
TOP3A-205ENST00000477508 MAP3K11Q16584 847 aa15.8■□□□□ 0.12
TOP3A-205ENST00000477508 DEFB115Q30KQ5 88 aa15.8■□□□□ 0.12
TOP3A-205ENST00000477508 RILPL2Q969X0 211 aa15.8■□□□□ 0.12
TOP3A-205ENST00000477508 OSBPL5Q9H0X9 879 aaPredicted RBP15.8■□□□□ 0.12
TOP3A-205ENST00000477508 DDX4Q9NQI0 724 aaKnown RBP15.8■□□□□ 0.12
TOP3A-205ENST00000477508 HIP1O00291 1037 aa15.79■□□□□ 0.12
TOP3A-205ENST00000477508 MBD4O95243 580 aa15.79■□□□□ 0.12
TOP3A-205ENST00000477508 TTC22Q5TAA0 569 aa15.79■□□□□ 0.12
TOP3A-205ENST00000477508 DDRGK1Q96HY6 314 aa15.79■□□□□ 0.12
TOP3A-205ENST00000477508 CSRNP1Q96S65 589 aa15.79■□□□□ 0.12
TOP3A-205ENST00000477508 ATP8A2Q9NTI2 1148 aa15.79■□□□□ 0.12
TOP3A-205ENST00000477508 ANGEL1Q9UNK9 670 aaKnown RBP15.79■□□□□ 0.12
TOP3A-205ENST00000477508 FLT1P17948 1338 aa15.78■□□□□ 0.12
TOP3A-205ENST00000477508 GNAT2P19087 354 aa15.78■□□□□ 0.12
TOP3A-205ENST00000477508 ECE1P42892 770 aa15.78■□□□□ 0.12
TOP3A-205ENST00000477508 ZMYM1Q5SVZ6 1142 aa15.78■□□□□ 0.12
TOP3A-205ENST00000477508 MAPKAPK5Q8IW41 473 aa15.78■□□□□ 0.12
TOP3A-205ENST00000477508 ZFPM1Q8IX07 1006 aa15.78■□□□□ 0.12
TOP3A-205ENST00000477508 LCORLQ8N3X6 602 aa15.78■□□□□ 0.12
TOP3A-205ENST00000477508 ZNF341Q9BYN7 854 aa15.78■□□□□ 0.12
TOP3A-205ENST00000477508 PUS7LQ9H0K6 701 aaKnown RBP15.78■□□□□ 0.12
TOP3A-205ENST00000477508 ARMT1Q9H993 441 aa15.78■□□□□ 0.12
TOP3A-205ENST00000477508 PI4KBQ9UBF8 816 aa15.78■□□□□ 0.12
TOP3A-205ENST00000477508 FOCADQ5VW36 1801 aa15.78■□□□□ 0.12
TOP3A-205ENST00000477508 UBE2Q2LH0YL09 131 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 TBC1D12O60347 775 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 USP2O75604 605 aaPredicted RBP15.77■□□□□ 0.12
TOP3A-205ENST00000477508 HLA-DOAP06340 250 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 MAP3K10Q02779 954 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 LDLRAD1Q5T700 205 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 SH3BP5LQ7L8J4 393 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 FOXP4Q8IVH2 680 aaPredicted RBP15.77■□□□□ 0.12
TOP3A-205ENST00000477508 CDAN1Q8IWY9 1227 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 ANKRD13AQ8IZ07 590 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 OSBP2Q969R2 916 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 CCDC102AQ96A19 550 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 STRBPQ96SI9 672 aaKnown RBP15.77■□□□□ 0.12
TOP3A-205ENST00000477508 HELLSQ9NRZ9 838 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 HERC5Q9UII4 1024 aaKnown RBP15.77■□□□□ 0.12
TOP3A-205ENST00000477508 TAOK2Q9UL54 1235 aa15.77■□□□□ 0.12
TOP3A-205ENST00000477508 SSC5DA1L4H1 1573 aa15.77■□□□□ 0.11
TOP3A-205ENST00000477508 CDK5RAP2Q96SN8 1893 aa15.76■□□□□ 0.11
TOP3A-205ENST00000477508 DDTLA6NHG4 134 aaPredicted RBP15.76■□□□□ 0.11
TOP3A-205ENST00000477508 HTRA3P83110 453 aa15.76■□□□□ 0.11
TOP3A-205ENST00000477508 PRKG1Q13976 671 aa15.76■□□□□ 0.11
TOP3A-205ENST00000477508 SLFNL1Q499Z3 407 aa15.76■□□□□ 0.11
TOP3A-205ENST00000477508 RGMBQ6NW40 437 aa15.76■□□□□ 0.11
TOP3A-205ENST00000477508 GIMAP6Q6P9H5 292 aa15.76■□□□□ 0.11
TOP3A-205ENST00000477508 TTC6Q86TZ1 520 aa15.76■□□□□ 0.11
TOP3A-205ENST00000477508 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
TOP3A-205ENST00000477508 AMOTL1Q8IY63 956 aa15.76■□□□□ 0.11
TOP3A-205ENST00000477508 GPAA1O43292 621 aa15.75■□□□□ 0.11
TOP3A-205ENST00000477508 CHGBP05060 677 aa15.75■□□□□ 0.11
TOP3A-205ENST00000477508 SDSP20132 328 aa15.75■□□□□ 0.11
TOP3A-205ENST00000477508 ZNF157P51786 506 aaPredicted RBP15.75■□□□□ 0.11
TOP3A-205ENST00000477508 MFAP1P55081 439 aaKnown RBP15.75■□□□□ 0.11
TOP3A-205ENST00000477508 MAP3K9P80192 1104 aa15.75■□□□□ 0.11
TOP3A-205ENST00000477508 DNAJC5GQ8N7S2 189 aa15.75■□□□□ 0.11
TOP3A-205ENST00000477508 KLRG1Q96E93 195 aa15.75■□□□□ 0.11
TOP3A-205ENST00000477508 DCP1AQ9NPI6 582 aaPredicted RBP15.75■□□□□ 0.11
TOP3A-205ENST00000477508 MKRN1Q9UHC7 482 aaKnown RBP15.75■□□□□ 0.11
TOP3A-205ENST00000477508 ZNF112Q9UJU3 913 aa15.75■□□□□ 0.11
TOP3A-205ENST00000477508 CSADQ9Y600 493 aa15.75■□□□□ 0.11
TOP3A-205ENST00000477508 SLC4A4Q9Y6R1 1079 aa15.75■□□□□ 0.11
TOP3A-205ENST00000477508 GSPT1P15170 499 aaKnown RBP15.74■□□□□ 0.11
TOP3A-205ENST00000477508 MCMDC2Q4G0Z9 681 aa15.74■□□□□ 0.11
TOP3A-205ENST00000477508 PAXIP1Q6ZW49 1069 aaPredicted RBP15.74■□□□□ 0.11
TOP3A-205ENST00000477508 MOB2Q70IA6 237 aa15.74■□□□□ 0.11
TOP3A-205ENST00000477508 MIGA2Q7L4E1 593 aa15.74■□□□□ 0.11
TOP3A-205ENST00000477508 METTL16Q86W50 562 aaKnown RBP15.74■□□□□ 0.11
TOP3A-205ENST00000477508 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.74■□□□□ 0.11
TOP3A-205ENST00000477508 SDR42E1Q8WUS8 393 aa15.74■□□□□ 0.11
TOP3A-205ENST00000477508 SLC10A4Q96EP9 437 aa15.74■□□□□ 0.11
TOP3A-205ENST00000477508 WRNIP1Q96S55 665 aa15.74■□□□□ 0.11
TOP3A-205ENST00000477508 TRIM34Q9BYJ4 488 aa15.74■□□□□ 0.11
TOP3A-205ENST00000477508 NACAP1Q9BZK3 213 aa15.74■□□□□ 0.11
TOP3A-205ENST00000477508 DIAPH3Q9NSV4 1193 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms