RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 TCP10Q12799 353 aa20.17■□□□□ 0.82
EPHB4-204ENST00000477446 PICALMQ13492 652 aa20.17■□□□□ 0.82
EPHB4-204ENST00000477446 TNFAIP1Q13829 316 aa20.17■□□□□ 0.82
EPHB4-204ENST00000477446 SULF1Q8IWU6 871 aa20.17■□□□□ 0.82
EPHB4-204ENST00000477446 TBC1D2Q9BYX2 928 aa20.17■□□□□ 0.82
EPHB4-204ENST00000477446 GLIS2Q9BZE0 524 aaPredicted RBP20.17■□□□□ 0.82
EPHB4-204ENST00000477446 ADM5C9JUS6 153 aa20.16■□□□□ 0.82
EPHB4-204ENST00000477446 TOMM70O94826 608 aa20.16■□□□□ 0.82
EPHB4-204ENST00000477446 RASA3Q14644 834 aa20.16■□□□□ 0.82
EPHB4-204ENST00000477446 CDC37L1Q7L3B6 337 aa20.16■□□□□ 0.82
EPHB4-204ENST00000477446 ZNF589Q86UQ0 364 aaPredicted RBP20.16■□□□□ 0.82
EPHB4-204ENST00000477446 USP48Q86UV5 1035 aa20.16■□□□□ 0.82
EPHB4-204ENST00000477446 FAM83AQ86UY5 434 aa20.16■□□□□ 0.82
EPHB4-204ENST00000477446 SDR42E1Q8WUS8 393 aa20.16■□□□□ 0.82
EPHB4-204ENST00000477446 DEFB129Q9H1M3 183 aa20.16■□□□□ 0.82
EPHB4-204ENST00000477446 IL25Q9H293 177 aa20.16■□□□□ 0.82
EPHB4-204ENST00000477446 SLC4A4Q9Y6R1 1079 aa20.16■□□□□ 0.82
EPHB4-204ENST00000477446 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
EPHB4-204ENST00000477446 USP5P45974 858 aa20.15■□□□□ 0.82
EPHB4-204ENST00000477446 TNNI2P48788 182 aa20.15■□□□□ 0.82
EPHB4-204ENST00000477446 DLK2Q6UY11 383 aa20.15■□□□□ 0.82
EPHB4-204ENST00000477446 MAPKAPK5Q8IW41 473 aa20.15■□□□□ 0.82
EPHB4-204ENST00000477446 ZFPM1Q8IX07 1006 aa20.15■□□□□ 0.82
EPHB4-204ENST00000477446 RUFY2Q8WXA3 655 aa20.15■□□□□ 0.82
EPHB4-204ENST00000477446 FLT1P17948 1338 aa20.14■□□□□ 0.82
EPHB4-204ENST00000477446 ENTPD3O75355 529 aa20.14■□□□□ 0.81
EPHB4-204ENST00000477446 FAM151AQ8WW52 585 aa20.14■□□□□ 0.81
EPHB4-204ENST00000477446 TMEM39BQ9GZU3 492 aa20.14■□□□□ 0.81
EPHB4-204ENST00000477446 MKRN1Q9UHC7 482 aaKnown RBP20.14■□□□□ 0.81
EPHB4-204ENST00000477446 CCDC171Q6TFL3 1326 aa20.14■□□□□ 0.81
EPHB4-204ENST00000477446 GNAT2P19087 354 aa20.13■□□□□ 0.81
EPHB4-204ENST00000477446 PRAMEF18Q5VWM3 479 aa20.13■□□□□ 0.81
EPHB4-204ENST00000477446 HSCBQ8IWL3 235 aa20.13■□□□□ 0.81
EPHB4-204ENST00000477446 SMC1BQ8NDV3 1235 aa20.13■□□□□ 0.81
EPHB4-204ENST00000477446 RBM46Q8TBY0 533 aaKnown RBP20.13■□□□□ 0.81
EPHB4-204ENST00000477446 MYH1P12882 1939 aa20.13■□□□□ 0.81
EPHB4-204ENST00000477446 NAV1Q8NEY1 1877 aa20.13■□□□□ 0.81
EPHB4-204ENST00000477446 GSG1L2A8MUP6 293 aa20.12■□□□□ 0.81
EPHB4-204ENST00000477446 ITGBL1O95965 494 aaPredicted RBP20.12■□□□□ 0.81
EPHB4-204ENST00000477446 VPS53Q5VIR6 699 aa20.12■□□□□ 0.81
EPHB4-204ENST00000477446 OSBPL5Q9H0X9 879 aaPredicted RBP20.12■□□□□ 0.81
EPHB4-204ENST00000477446 DCP1AQ9NPI6 582 aaPredicted RBP20.12■□□□□ 0.81
EPHB4-204ENST00000477446 ATP8A2Q9NTI2 1148 aa20.12■□□□□ 0.81
EPHB4-204ENST00000477446 PPP2R3BQ9Y5P8 575 aa20.12■□□□□ 0.81
EPHB4-204ENST00000477446 BAZ2AQ9UIF9 1905 aaKnown RBP20.12■□□□□ 0.81
EPHB4-204ENST00000477446 RAD50Q92878 1312 aa20.12■□□□□ 0.81
EPHB4-204ENST00000477446 PATL2C9JE40 543 aaKnown RBP20.12■□□□□ 0.81
EPHB4-204ENST00000477446 SGSM2O43147 1006 aa20.12■□□□□ 0.81
EPHB4-204ENST00000477446 SH3BP5LQ7L8J4 393 aa20.12■□□□□ 0.81
EPHB4-204ENST00000477446 CDAN1Q8IWY9 1227 aa20.12■□□□□ 0.81
EPHB4-204ENST00000477446 TEPSINQ96N21 525 aa20.12■□□□□ 0.81
EPHB4-204ENST00000477446 ESYT1Q9BSJ8 1104 aa20.12■□□□□ 0.81
EPHB4-204ENST00000477446 TRAF5O00463 557 aa20.11■□□□□ 0.81
EPHB4-204ENST00000477446 FOXP2O15409 715 aa20.11■□□□□ 0.81
EPHB4-204ENST00000477446 REC8O95072 547 aa20.11■□□□□ 0.81
EPHB4-204ENST00000477446 SAP30BPQ9UHR5 308 aaKnown RBP20.11■□□□□ 0.81
EPHB4-204ENST00000477446 DDX60LQ5H9U9 1706 aaKnown RBP20.1■□□□□ 0.81
EPHB4-204ENST00000477446 DDTLA6NHG4 134 aaPredicted RBP20.1■□□□□ 0.81
EPHB4-204ENST00000477446 APPP05067 770 aa20.1■□□□□ 0.81
EPHB4-204ENST00000477446 FMR1Q06787 632 aaKnown RBP eCLIP20.1■□□□□ 0.819e-6■■■■□ 20.6
EPHB4-204ENST00000477446 ZSCAN29Q8IWY8 852 aaPredicted RBP20.1■□□□□ 0.81
EPHB4-204ENST00000477446 EPB41L4AQ9HCS5 686 aaPredicted RBP20.1■□□□□ 0.81
EPHB4-204ENST00000477446 PALD1Q9ULE6 856 aa20.1■□□□□ 0.81
EPHB4-204ENST00000477446 RPAP1Q9BWH6 1393 aaPredicted RBP20.09■□□□□ 0.81
EPHB4-204ENST00000477446 HSPD1P10809 573 aaKnown RBP20.09■□□□□ 0.81
EPHB4-204ENST00000477446 NBPF12Q5TAG4 269 aaPredicted RBP20.09■□□□□ 0.81
EPHB4-204ENST00000477446 GIMAP6Q6P9H5 292 aa20.09■□□□□ 0.81
EPHB4-204ENST00000477446 IFNL3Q8IZI9 196 aa20.09■□□□□ 0.81
EPHB4-204ENST00000477446 CDCA5Q96FF9 252 aa20.09■□□□□ 0.81
EPHB4-204ENST00000477446 MCM9Q9NXL9 1143 aa20.09■□□□□ 0.81
EPHB4-204ENST00000477446 COL2A1P02458 1487 aaPredicted RBP20.09■□□□□ 0.81
EPHB4-204ENST00000477446 ATRNL1Q5VV63 1379 aa20.09■□□□□ 0.81
EPHB4-204ENST00000477446 NFKBIBQ15653 356 aa20.08■□□□□ 0.81
EPHB4-204ENST00000477446 SLC4A8Q2Y0W8 1093 aa20.08■□□□□ 0.81
EPHB4-204ENST00000477446 DHX36Q9H2U1 1008 aaKnown RBP20.08■□□□□ 0.81
EPHB4-204ENST00000477446 FSTL1Q12841 308 aa20.08■□□□□ 0.8
EPHB4-204ENST00000477446 CSRNP1Q96S65 589 aa20.08■□□□□ 0.8
EPHB4-204ENST00000477446 NACAP1Q9BZK3 213 aa20.08■□□□□ 0.8
EPHB4-204ENST00000477446 USP17L12C9JPN9 530 aa20.07■□□□□ 0.8
EPHB4-204ENST00000477446 USP17L21D6R901 530 aa20.07■□□□□ 0.8
EPHB4-204ENST00000477446 EPB41L2O43491 1005 aaKnown RBP20.07■□□□□ 0.8
EPHB4-204ENST00000477446 TDO2P48775 406 aa20.07■□□□□ 0.8
EPHB4-204ENST00000477446 CTR9Q6PD62 1173 aa20.07■□□□□ 0.8
EPHB4-204ENST00000477446 USP26Q9BXU7 913 aa20.07■□□□□ 0.8
EPHB4-204ENST00000477446 PASKQ96RG2 1323 aa20.07■□□□□ 0.8
EPHB4-204ENST00000477446 SIPA1L1O43166 1804 aa20.07■□□□□ 0.8
EPHB4-204ENST00000477446 TRPM7Q96QT4 1865 aa20.06■□□□□ 0.8
EPHB4-204ENST00000477446 POLR3DP05423 398 aaPredicted RBP20.06■□□□□ 0.8
EPHB4-204ENST00000477446 SUPT20HL1Q3ZLR7 823 aa20.06■□□□□ 0.8
EPHB4-204ENST00000477446 DSCC1Q9BVC3 393 aa20.06■□□□□ 0.8
EPHB4-204ENST00000477446 SSC5DA1L4H1 1573 aa20.06■□□□□ 0.8
EPHB4-204ENST00000477446 CYP2D7A0A087X1C5 515 aa20.05■□□□□ 0.8
EPHB4-204ENST00000477446 FGAP02671 866 aa20.05■□□□□ 0.8
EPHB4-204ENST00000477446 CYP2D6P10635 497 aa20.05■□□□□ 0.8
EPHB4-204ENST00000477446 PLCD1P51178 756 aa20.05■□□□□ 0.8
EPHB4-204ENST00000477446 PTH1RQ03431 593 aa20.05■□□□□ 0.8
EPHB4-204ENST00000477446 EVX2Q03828 476 aa20.05■□□□□ 0.8
EPHB4-204ENST00000477446 RABEP1Q15276 862 aa20.05■□□□□ 0.8
EPHB4-204ENST00000477446 ALX1Q15699 326 aa20.05■□□□□ 0.8
EPHB4-204ENST00000477446 IL27Q8NEV9 243 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms