RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 DIS3LQ8TF46 1054 aaKnown RBP12.33□□□□□ -0.44
COL4A5-204ENST00000477429 FAM151AQ8WW52 585 aa12.33□□□□□ -0.44
COL4A5-204ENST00000477429 MRIQ9BWK5 157 aa12.33□□□□□ -0.44
COL4A5-204ENST00000477429 ALPK3Q96L96 1907 aa12.33□□□□□ -0.44
COL4A5-204ENST00000477429 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
COL4A5-204ENST00000477429 PHF20L1A8MW92 1017 aa12.32□□□□□ -0.44
COL4A5-204ENST00000477429 FRAT2O75474 233 aaPredicted RBP12.32□□□□□ -0.44
COL4A5-204ENST00000477429 FARP2O94887 1054 aaPredicted RBP12.32□□□□□ -0.44
COL4A5-204ENST00000477429 RFX5P48382 616 aaPredicted RBP12.32□□□□□ -0.44
COL4A5-204ENST00000477429 NOL9Q5SY16 702 aaKnown RBP12.32□□□□□ -0.44
COL4A5-204ENST00000477429 HHIPL2Q6UWX4 724 aa12.32□□□□□ -0.44
COL4A5-204ENST00000477429 ALYREFQ86V81 257 aaKnown RBP12.32□□□□□ -0.44
COL4A5-204ENST00000477429 VPS37DQ86XT2 251 aa12.32□□□□□ -0.44
COL4A5-204ENST00000477429 TBC1D22AQ8WUA7 517 aa12.32□□□□□ -0.44
COL4A5-204ENST00000477429 SRCIN1Q9C0H9 1055 aa12.32□□□□□ -0.44
COL4A5-204ENST00000477429 NCOR1O75376 2440 aa12.32□□□□□ -0.44
COL4A5-204ENST00000477429 MUC6Q6W4X9 2439 aa12.32□□□□□ -0.44
COL4A5-204ENST00000477429 CACNA1FO60840 1977 aa12.31□□□□□ -0.44
COL4A5-204ENST00000477429 SGPL1O95470 568 aa12.31□□□□□ -0.44
COL4A5-204ENST00000477429 FLT3LGP49771 235 aa12.31□□□□□ -0.44
COL4A5-204ENST00000477429 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
COL4A5-204ENST00000477429 DCAF15Q66K64 600 aa12.31□□□□□ -0.44
COL4A5-204ENST00000477429 BIN2Q9UBW5 565 aaPredicted RBP12.31□□□□□ -0.44
COL4A5-204ENST00000477429 ADCY3O60266 1144 aa12.3□□□□□ -0.44
COL4A5-204ENST00000477429 INHAP05111 366 aa12.3□□□□□ -0.44
COL4A5-204ENST00000477429 TRIM32Q13049 653 aa12.3□□□□□ -0.44
COL4A5-204ENST00000477429 CAVIN4Q5BKX8 364 aa12.3□□□□□ -0.44
COL4A5-204ENST00000477429 ATG9AQ7Z3C6 839 aa12.3□□□□□ -0.44
COL4A5-204ENST00000477429 WDR63Q8IWG1 891 aa12.3□□□□□ -0.44
COL4A5-204ENST00000477429 DEFB118Q96PH6 123 aa12.3□□□□□ -0.44
COL4A5-204ENST00000477429 TMOD2Q9NZR1 351 aa12.3□□□□□ -0.44
COL4A5-204ENST00000477429 MGAMO43451 1857 aa12.29□□□□□ -0.44
COL4A5-204ENST00000477429 A0A0G2JLL6 359 aaPredicted RBP12.29□□□□□ -0.44
COL4A5-204ENST00000477429 WDHD1O75717 1129 aaPredicted RBP12.29□□□□□ -0.44
COL4A5-204ENST00000477429 HOXD10P28358 340 aa12.29□□□□□ -0.44
COL4A5-204ENST00000477429 FCGRTP55899 365 aa12.29□□□□□ -0.44
COL4A5-204ENST00000477429 PRRT2Q7Z6L0 340 aaPredicted RBP12.29□□□□□ -0.44
COL4A5-204ENST00000477429 NKX2-3Q8TAU0 364 aa12.29□□□□□ -0.44
COL4A5-204ENST00000477429 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
COL4A5-204ENST00000477429 PAWRQ96IZ0 340 aaKnown RBP12.29□□□□□ -0.44
COL4A5-204ENST00000477429 HTATIP2Q9BUP3 242 aa12.29□□□□□ -0.44
COL4A5-204ENST00000477429 USP44Q9H0E7 712 aa12.29□□□□□ -0.44
COL4A5-204ENST00000477429 DDX4Q9NQI0 724 aaKnown RBP12.29□□□□□ -0.44
COL4A5-204ENST00000477429 USP40Q9NVE5 1235 aa12.29□□□□□ -0.44
COL4A5-204ENST00000477429 AFG3L2Q9Y4W6 797 aa12.29□□□□□ -0.44
COL4A5-204ENST00000477429 ZHX2Q9Y6X8 837 aa12.29□□□□□ -0.44
COL4A5-204ENST00000477429 RFX7Q2KHR2 1363 aa12.29□□□□□ -0.44
COL4A5-204ENST00000477429 CACNA1GO43497 2377 aa12.28□□□□□ -0.44
COL4A5-204ENST00000477429 DDTLA6NHG4 134 aaPredicted RBP12.28□□□□□ -0.44
COL4A5-204ENST00000477429 PTPRAP18433 802 aa12.28□□□□□ -0.44
COL4A5-204ENST00000477429 UBXN2AP68543 259 aa12.28□□□□□ -0.44
COL4A5-204ENST00000477429 LRIT3Q3SXY7 679 aa12.28□□□□□ -0.44
COL4A5-204ENST00000477429 TREML2Q5T2D2 321 aa12.28□□□□□ -0.44
COL4A5-204ENST00000477429 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
COL4A5-204ENST00000477429 SLAIN1Q8ND83 568 aa12.28□□□□□ -0.44
COL4A5-204ENST00000477429 PARK7Q99497 189 aaKnown RBP12.28□□□□□ -0.44
COL4A5-204ENST00000477429 GDF15Q99988 308 aa12.28□□□□□ -0.44
COL4A5-204ENST00000477429 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
COL4A5-204ENST00000477429 PAK6Q9NQU5 681 aaPredicted RBP12.28□□□□□ -0.44
COL4A5-204ENST00000477429 ZMYND8Q9ULU4 1186 aaPredicted RBP12.28□□□□□ -0.44
COL4A5-204ENST00000477429 SUGT1Q9Y2Z0 365 aa12.28□□□□□ -0.44
COL4A5-204ENST00000477429 NR2E3Q9Y5X4 410 aa12.28□□□□□ -0.44
COL4A5-204ENST00000477429 DOCK3Q8IZD9 2030 aa12.27□□□□□ -0.44
COL4A5-204ENST00000477429 CXCL11O14625 94 aa12.27□□□□□ -0.45
COL4A5-204ENST00000477429 EVI5O60447 810 aa12.27□□□□□ -0.45
COL4A5-204ENST00000477429 PEX10O60683 326 aa12.27□□□□□ -0.45
COL4A5-204ENST00000477429 PHKA1P46020 1223 aa12.27□□□□□ -0.45
COL4A5-204ENST00000477429 RGS3P49796 1198 aa12.27□□□□□ -0.45
COL4A5-204ENST00000477429 RRP1BQ14684 758 aaKnown RBP12.27□□□□□ -0.45
COL4A5-204ENST00000477429 PUM3Q15397 648 aaKnown RBP12.27□□□□□ -0.45
COL4A5-204ENST00000477429 GADL1Q6ZQY3 521 aa12.27□□□□□ -0.45
COL4A5-204ENST00000477429 ZNF384Q8TF68 577 aa12.27□□□□□ -0.45
COL4A5-204ENST00000477429 PHIPQ8WWQ0 1821 aa12.27□□□□□ -0.45
COL4A5-204ENST00000477429 FAM196BA6NMK8 535 aa12.26□□□□□ -0.45
COL4A5-204ENST00000477429 EYA2O00167 538 aa12.26□□□□□ -0.45
COL4A5-204ENST00000477429 TFRCP02786 760 aaKnown RBP12.26□□□□□ -0.45
COL4A5-204ENST00000477429 ADORA1P30542 326 aa12.26□□□□□ -0.45
COL4A5-204ENST00000477429 SCYL3Q8IZE3 742 aa12.26□□□□□ -0.45
COL4A5-204ENST00000477429 HOOK2Q96ED9 719 aa12.26□□□□□ -0.45
COL4A5-204ENST00000477429 FAM161BQ96MY7 647 aa12.26□□□□□ -0.45
COL4A5-204ENST00000477429 MAST3O60307 1309 aa12.26□□□□□ -0.45
COL4A5-204ENST00000477429 KIF16BQ96L93 1317 aa12.26□□□□□ -0.45
COL4A5-204ENST00000477429 PTPRFP10586 1907 aa12.25□□□□□ -0.45
COL4A5-204ENST00000477429 CDH23Q9H251 3354 aa12.25□□□□□ -0.45
COL4A5-204ENST00000477429 TRIM75PA6NK02 468 aa12.25□□□□□ -0.45
COL4A5-204ENST00000477429 IFIT1P09914 478 aaKnown RBP12.25□□□□□ -0.45
COL4A5-204ENST00000477429 SYN1P17600 705 aa12.25□□□□□ -0.45
COL4A5-204ENST00000477429 MAP3K10Q02779 954 aa12.25□□□□□ -0.45
COL4A5-204ENST00000477429 IRF5Q13568 498 aa12.25□□□□□ -0.45
COL4A5-204ENST00000477429 ANKRD13CQ8N6S4 541 aa12.25□□□□□ -0.45
COL4A5-204ENST00000477429 WDR66Q8TBY9 1149 aa12.25□□□□□ -0.45
COL4A5-204ENST00000477429 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
COL4A5-204ENST00000477429 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.25□□□□□ -0.45
COL4A5-204ENST00000477429 TNPO2O14787 897 aaKnown RBP12.24□□□□□ -0.45
COL4A5-204ENST00000477429 GAKO14976 1311 aa12.24□□□□□ -0.45
COL4A5-204ENST00000477429 VASPP50552 380 aaPredicted RBP12.24□□□□□ -0.45
COL4A5-204ENST00000477429 AK9Q5TCS8 1911 aa12.24□□□□□ -0.45
COL4A5-204ENST00000477429 C7orf61Q8IZ16 206 aa12.24□□□□□ -0.45
COL4A5-204ENST00000477429 PXYLP1Q8TE99 480 aa12.24□□□□□ -0.45
COL4A5-204ENST00000477429 LPIN2Q92539 896 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms