RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CCDC86Q9H6F5 360 aaKnown RBP6.11□□□□□ -1.43
XRN1-211ENST00000477237 KCNK12Q9HB15 430 aa6.11□□□□□ -1.43
XRN1-211ENST00000477237 RNGTTO60942 597 aaKnown RBP6.1□□□□□ -1.43
XRN1-211ENST00000477237 HOXA5P20719 270 aa6.1□□□□□ -1.43
XRN1-211ENST00000477237 ID3Q02535 119 aa6.1□□□□□ -1.43
XRN1-211ENST00000477237 TTLL4Q14679 1199 aa6.1□□□□□ -1.43
XRN1-211ENST00000477237 TOP6BLQ8N6T0 577 aa6.1□□□□□ -1.43
XRN1-211ENST00000477237 FBXO15Q8NCQ5 510 aaPredicted RBP6.1□□□□□ -1.43
XRN1-211ENST00000477237 KIRREL1Q96J84 757 aa6.1□□□□□ -1.43
XRN1-211ENST00000477237 ZNF576Q9H609 170 aa6.1□□□□□ -1.43
XRN1-211ENST00000477237 ZNF862O60290 1169 aa6.09□□□□□ -1.43
XRN1-211ENST00000477237 ATG7O95352 703 aa6.09□□□□□ -1.43
XRN1-211ENST00000477237 HCLS1P14317 486 aaPredicted RBP6.09□□□□□ -1.43
XRN1-211ENST00000477237 EHHADHQ08426 723 aa6.09□□□□□ -1.43
XRN1-211ENST00000477237 KCNA10Q16322 511 aa6.09□□□□□ -1.43
XRN1-211ENST00000477237 TMEM67Q5HYA8 995 aa6.09□□□□□ -1.43
XRN1-211ENST00000477237 FAM214BQ7L5A3 538 aa6.09□□□□□ -1.43
XRN1-211ENST00000477237 DIRC2Q96SL1 478 aa6.09□□□□□ -1.43
XRN1-211ENST00000477237 ZC3H12CQ9C0D7 883 aaKnown RBP6.09□□□□□ -1.43
XRN1-211ENST00000477237 CD320Q9NPF0 282 aa6.09□□□□□ -1.43
XRN1-211ENST00000477237 PCOLCE2Q9UKZ9 415 aa6.09□□□□□ -1.43
XRN1-211ENST00000477237 ZNF777Q9ULD5 760 aaPredicted RBP6.09□□□□□ -1.43
XRN1-211ENST00000477237 PCDHGC5Q9Y5F6 944 aa6.09□□□□□ -1.43
XRN1-211ENST00000477237 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.08□□□□□ -1.44
XRN1-211ENST00000477237 AP3B2Q13367 1082 aa6.08□□□□□ -1.44
XRN1-211ENST00000477237 ALKBH2Q6NS38 261 aa6.08□□□□□ -1.44
XRN1-211ENST00000477237 CYFIP1Q7L576 1253 aa6.08□□□□□ -1.44
XRN1-211ENST00000477237 SPACA3Q8IXA5 215 aa6.08□□□□□ -1.44
XRN1-211ENST00000477237 NSUN3Q9H649 340 aaKnown RBP6.08□□□□□ -1.44
XRN1-211ENST00000477237 NEFMP07197 916 aa6.07□□□□□ -1.44
XRN1-211ENST00000477237 SLFN14P0C7P3 912 aa6.07□□□□□ -1.44
XRN1-211ENST00000477237 TMEM253P0C7T8 217 aa6.07□□□□□ -1.44
XRN1-211ENST00000477237 MTMR3Q13615 1198 aa6.07□□□□□ -1.44
XRN1-211ENST00000477237 ATG14Q6ZNE5 492 aa6.07□□□□□ -1.44
XRN1-211ENST00000477237 GALNT12Q8IXK2 581 aa6.07□□□□□ -1.44
XRN1-211ENST00000477237 C19orf73Q9NVV2 129 aa6.07□□□□□ -1.44
XRN1-211ENST00000477237 ITPKAP23677 461 aa6.06□□□□□ -1.44
XRN1-211ENST00000477237 AAMPQ13685 434 aa6.06□□□□□ -1.44
XRN1-211ENST00000477237 NKPD1Q17RQ9 610 aa6.06□□□□□ -1.44
XRN1-211ENST00000477237 KIF4BQ2VIQ3 1234 aa6.06□□□□□ -1.44
XRN1-211ENST00000477237 CIAPIN1Q6FI81 312 aa6.06□□□□□ -1.44
XRN1-211ENST00000477237 GTF3C2Q8WUA4 911 aaPredicted RBP6.06□□□□□ -1.44
XRN1-211ENST00000477237 RELTQ969Z4 430 aa6.06□□□□□ -1.44
XRN1-211ENST00000477237 PITPNM2Q9BZ72 1349 aa6.05□□□□□ -1.44
XRN1-211ENST00000477237 FZD6O60353 706 aa6.05□□□□□ -1.44
XRN1-211ENST00000477237 USP5P45974 858 aa6.05□□□□□ -1.44
XRN1-211ENST00000477237 ISL2Q96A47 359 aa6.05□□□□□ -1.44
XRN1-211ENST00000477237 MED14OSP0DP75 135 aa6.04□□□□□ -1.44
XRN1-211ENST00000477237 GJD3Q8N144 294 aa6.04□□□□□ -1.44
XRN1-211ENST00000477237 SMG5Q9UPR3 1016 aaKnown RBP6.04□□□□□ -1.44
XRN1-211ENST00000477237 ETV2O00321 342 aaPredicted RBP6.03□□□□□ -1.44
XRN1-211ENST00000477237 IGF2BP3O00425 579 aaKnown RBP eCLIP6.03□□□□□ -1.44
XRN1-211ENST00000477237 NPR3P17342 541 aa6.03□□□□□ -1.44
XRN1-211ENST00000477237 ZNF157P51786 506 aaPredicted RBP6.03□□□□□ -1.44
XRN1-211ENST00000477237 KIAA0319Q5VV43 1072 aa6.03□□□□□ -1.44
XRN1-211ENST00000477237 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.03□□□□□ -1.44
XRN1-211ENST00000477237 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
XRN1-211ENST00000477237 CARS2Q9HA77 564 aaKnown RBP6.03□□□□□ -1.44
XRN1-211ENST00000477237 SSU72Q9NP77 194 aaKnown RBP6.03□□□□□ -1.44
XRN1-211ENST00000477237 GTF2IRD1Q9UHL9 959 aa6.03□□□□□ -1.44
XRN1-211ENST00000477237 TCAF2A6NFQ2 919 aa6.02□□□□□ -1.45
XRN1-211ENST00000477237 NUAK1O60285 661 aa6.02□□□□□ -1.45
XRN1-211ENST00000477237 GDNFP39905 211 aa6.02□□□□□ -1.45
XRN1-211ENST00000477237 USPL1Q5W0Q7 1092 aa6.02□□□□□ -1.45
XRN1-211ENST00000477237 DCP1AQ9NPI6 582 aaPredicted RBP6.02□□□□□ -1.45
XRN1-211ENST00000477237 CCDC87Q9NVE4 849 aa6.02□□□□□ -1.45
XRN1-211ENST00000477237 GSTP1P09211 210 aaKnown RBP6.01□□□□□ -1.45
XRN1-211ENST00000477237 GLDCP23378 1020 aa6.01□□□□□ -1.45
XRN1-211ENST00000477237 CLCN7P51798 805 aa6.01□□□□□ -1.45
XRN1-211ENST00000477237 LINC00310P59036 64 aa6.01□□□□□ -1.45
XRN1-211ENST00000477237 FAAP100Q0VG06 881 aa6.01□□□□□ -1.45
XRN1-211ENST00000477237 CSRNP1Q96S65 589 aa6.01□□□□□ -1.45
XRN1-211ENST00000477237 EPB41L4BQ9H329 900 aa6.01□□□□□ -1.45
XRN1-211ENST00000477237 PARD6AQ9NPB6 346 aa6.01□□□□□ -1.45
XRN1-211ENST00000477237 KRT82Q9NSB4 513 aa6.01□□□□□ -1.45
XRN1-211ENST00000477237 FOXD2O60548 495 aaPredicted RBP6□□□□□ -1.45
XRN1-211ENST00000477237 PTPN12Q05209 780 aaKnown RBP6□□□□□ -1.45
XRN1-211ENST00000477237 IRF2BPLQ9H1B7 796 aa6□□□□□ -1.45
XRN1-211ENST00000477237 EHD4Q9H223 541 aa6□□□□□ -1.45
XRN1-211ENST00000477237 A0A0G2JLL6 359 aaPredicted RBP5.99□□□□□ -1.45
XRN1-211ENST00000477237 PRKCSHP14314 528 aaPredicted RBP5.99□□□□□ -1.45
XRN1-211ENST00000477237 DBX2Q6ZNG2 339 aa5.99□□□□□ -1.45
XRN1-211ENST00000477237 RNF214Q8ND24 703 aa5.99□□□□□ -1.45
XRN1-211ENST00000477237 ATP13A1Q9HD20 1204 aa5.99□□□□□ -1.45
XRN1-211ENST00000477237 ABCB6Q9NP58 842 aa5.99□□□□□ -1.45
XRN1-211ENST00000477237 PRDM10Q9NQV6 1147 aa5.99□□□□□ -1.45
XRN1-211ENST00000477237 SEMA3GQ9NS98 782 aa5.99□□□□□ -1.45
XRN1-211ENST00000477237 FAM13AO94988 1023 aa5.98□□□□□ -1.45
XRN1-211ENST00000477237 KRTAP10-2P60368 255 aa5.98□□□□□ -1.45
XRN1-211ENST00000477237 ZC3H12AQ5D1E8 599 aaKnown RBP5.98□□□□□ -1.45
XRN1-211ENST00000477237 RPS26P11Q5JNZ5 115 aaPredicted RBP5.98□□□□□ -1.45
XRN1-211ENST00000477237 PDZD3Q86UT5 571 aa5.98□□□□□ -1.45
XRN1-211ENST00000477237 KCNN1Q92952 543 aa5.98□□□□□ -1.45
XRN1-211ENST00000477237 GNAT3A8MTJ3 354 aa5.97□□□□□ -1.45
XRN1-211ENST00000477237 EOMESO95936 686 aa5.97□□□□□ -1.45
XRN1-211ENST00000477237 KCNB2Q92953 911 aa5.97□□□□□ -1.45
XRN1-211ENST00000477237 HSPA12BQ96MM6 686 aa5.97□□□□□ -1.45
XRN1-211ENST00000477237 BMP7P18075 431 aa5.96□□□□□ -1.46
XRN1-211ENST00000477237 ERVK-24P63145 666 aa5.96□□□□□ -1.46
XRN1-211ENST00000477237 UBE3DQ7Z6J8 389 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms