RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 MCOLN1Q9GZU1 580 aa9.23□□□□□ -0.93
BRCA1-214ENST00000477152 CASP8AP2Q9UKL3 1982 aa9.22□□□□□ -0.93
BRCA1-214ENST00000477152 ADM5C9JUS6 153 aa9.22□□□□□ -0.93
BRCA1-214ENST00000477152 STRIP1Q5VSL9 837 aa9.22□□□□□ -0.93
BRCA1-214ENST00000477152 ANGEL2Q5VTE6 544 aaKnown RBP9.22□□□□□ -0.93
BRCA1-214ENST00000477152 CCDC85AQ96PX6 553 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-214ENST00000477152 PAPPA2Q9BXP8 1791 aa9.22□□□□□ -0.93
BRCA1-214ENST00000477152 SHTN1A0MZ66 631 aa9.21□□□□□ -0.93
BRCA1-214ENST00000477152 RGS19P49795 217 aa9.21□□□□□ -0.93
BRCA1-214ENST00000477152 CCT4P50991 539 aaKnown RBP9.21□□□□□ -0.93
BRCA1-214ENST00000477152 PKN2Q16513 984 aaKnown RBP9.21□□□□□ -0.93
BRCA1-214ENST00000477152 APOBEC3FQ8IUX4 373 aaKnown RBP9.21□□□□□ -0.93
BRCA1-214ENST00000477152 CDAN1Q8IWY9 1227 aa9.21□□□□□ -0.93
BRCA1-214ENST00000477152 TTLL11Q8NHH1 800 aa9.21□□□□□ -0.93
BRCA1-214ENST00000477152 ZNF516Q92618 1163 aa9.21□□□□□ -0.93
BRCA1-214ENST00000477152 SCN9AQ15858 1988 aa9.21□□□□□ -0.94
BRCA1-214ENST00000477152 SPEF2Q9C093 1822 aa9.21□□□□□ -0.94
BRCA1-214ENST00000477152 ANKRD18BA2A2Z9 1011 aa9.21□□□□□ -0.94
BRCA1-214ENST00000477152 NEURL1BA8MQ27 555 aa9.21□□□□□ -0.94
BRCA1-214ENST00000477152 F12P00748 615 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-214ENST00000477152 FKBP5Q13451 457 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-214ENST00000477152 POTEGQ6S5H5 508 aa9.21□□□□□ -0.94
BRCA1-214ENST00000477152 ARMC9Q7Z3E5 817 aa9.21□□□□□ -0.94
BRCA1-214ENST00000477152 PLA2G12BQ9BX93 195 aa9.21□□□□□ -0.94
BRCA1-214ENST00000477152 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.94
BRCA1-214ENST00000477152 MINPP1Q9UNW1 487 aa9.21□□□□□ -0.94
BRCA1-214ENST00000477152 H7C1W4 665 aa9.2□□□□□ -0.94
BRCA1-214ENST00000477152 MYO1BO43795 1136 aa9.2□□□□□ -0.94
BRCA1-214ENST00000477152 JUNDP17535 347 aa9.2□□□□□ -0.94
BRCA1-214ENST00000477152 SREBF2Q12772 1141 aa9.2□□□□□ -0.94
BRCA1-214ENST00000477152 UBE3BQ7Z3V4 1068 aa9.2□□□□□ -0.94
BRCA1-214ENST00000477152 MTRQ99707 1265 aa9.2□□□□□ -0.94
BRCA1-214ENST00000477152 ZNF804BA4D1E1 1349 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 FAM155AB1AL88 458 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-214ENST00000477152 TRPA1O75762 1119 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 CTHP32929 405 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 TTLL5Q6EMB2 1281 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 LINS1Q8NG48 757 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 DNAAF4Q8WXU2 420 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 GREM2Q9H772 168 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 RNF186Q9NXI6 227 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 ANP32CO43423 234 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 IGKV5-2P06315 115 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 ITGA6P23229 1130 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 ZEB1P37275 1124 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-214ENST00000477152 IFIT5Q13325 482 aaKnown RBP9.19□□□□□ -0.94
BRCA1-214ENST00000477152 GCKRQ14397 625 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 TAF7LQ5H9L4 462 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 ZNF804AQ7Z570 1209 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 CTU1Q7Z7A3 348 aaKnown RBP9.19□□□□□ -0.94
BRCA1-214ENST00000477152 WDR63Q8IWG1 891 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 JARID2Q92833 1246 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-214ENST00000477152 GMLQ99445 158 aa9.19□□□□□ -0.94
BRCA1-214ENST00000477152 COL1A1P02452 1464 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-214ENST00000477152 ALDH1A1P00352 501 aa9.18□□□□□ -0.94
BRCA1-214ENST00000477152 EGFRP00533 1210 aa9.18□□□□□ -0.94
BRCA1-214ENST00000477152 RFX1P22670 979 aa9.18□□□□□ -0.94
BRCA1-214ENST00000477152 INHBEP58166 350 aa9.18□□□□□ -0.94
BRCA1-214ENST00000477152 CWF19L2Q2TBE0 894 aaKnown RBP9.18□□□□□ -0.94
BRCA1-214ENST00000477152 DACT2Q5SW24 774 aa9.18□□□□□ -0.94
BRCA1-214ENST00000477152 RASAL3Q86YV0 1011 aa9.18□□□□□ -0.94
BRCA1-214ENST00000477152 TSPYL6Q8N831 410 aa9.18□□□□□ -0.94
BRCA1-214ENST00000477152 TSR2Q969E8 191 aaKnown RBP9.18□□□□□ -0.94
BRCA1-214ENST00000477152 CSRNP1Q96S65 589 aa9.18□□□□□ -0.94
BRCA1-214ENST00000477152 ALG2Q9H553 416 aa9.18□□□□□ -0.94
BRCA1-214ENST00000477152 PPP2R3BQ9Y5P8 575 aa9.18□□□□□ -0.94
BRCA1-214ENST00000477152 UNCXA6NJT0 531 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 PPP1R12BO60237 982 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-214ENST00000477152 FBXO45P0C2W1 286 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 DLGAP5Q15398 846 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 CSF1RP07333 972 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 FKBP1AP62942 108 aaKnown RBP9.17□□□□□ -0.94
BRCA1-214ENST00000477152 PTPRNQ16849 979 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 CCDC57Q2TAC2 916 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 SUPT20HL1Q3ZLR7 823 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 NOM1Q5C9Z4 860 aaKnown RBP9.17□□□□□ -0.94
BRCA1-214ENST00000477152 OTUD7BQ6GQQ9 843 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 NKX2-3Q8TAU0 364 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 UCN2Q96RP3 112 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 MRS2Q9HD23 443 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 FKBPLQ9UIM3 349 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 CHMP3Q9Y3E7 222 aa9.17□□□□□ -0.94
BRCA1-214ENST00000477152 WNT10BO00744 389 aa9.16□□□□□ -0.94
BRCA1-214ENST00000477152 DXOO77932 396 aaKnown RBP9.16□□□□□ -0.94
BRCA1-214ENST00000477152 GTF2IP78347 998 aa9.16□□□□□ -0.94
BRCA1-214ENST00000477152 PCNTO95613 3336 aa9.16□□□□□ -0.94
BRCA1-214ENST00000477152 ECM29Q5VYK3 1845 aa9.16□□□□□ -0.94
BRCA1-214ENST00000477152 TM4SF4P48230 202 aa9.15□□□□□ -0.94
BRCA1-214ENST00000477152 CHRNDQ07001 517 aa9.15□□□□□ -0.94
BRCA1-214ENST00000477152 TNFAIP1Q13829 316 aa9.15□□□□□ -0.94
BRCA1-214ENST00000477152 NBPF9Q3BBW0 867 aa9.15□□□□□ -0.94
BRCA1-214ENST00000477152 MSS51Q4VC12 460 aa9.15□□□□□ -0.94
BRCA1-214ENST00000477152 TJAP1Q5JTD0 557 aa9.15□□□□□ -0.94
BRCA1-214ENST00000477152 C15orf52Q6ZUT6 534 aaKnown RBP9.15□□□□□ -0.94
BRCA1-214ENST00000477152 ZIC5Q96T25 663 aa9.15□□□□□ -0.94
BRCA1-214ENST00000477152 NUDT12Q9BQG2 462 aa9.15□□□□□ -0.94
BRCA1-214ENST00000477152 C9orf78Q9NZ63 289 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-214ENST00000477152 COL4A1P02462 1669 aa9.15□□□□□ -0.94
BRCA1-214ENST00000477152 MANSC4A6NHS7 340 aaPredicted RBP9.15□□□□□ -0.95
BRCA1-214ENST00000477152 UBE2Q2LH0YL09 131 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms