RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 FGRP09769 529 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 EVCP57679 992 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 FKBP1AP62942 108 aaKnown RBP17.07■□□□□ 0.32
COL4A6-206ENST00000477085 TRDNQ13061 729 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 SBK1Q52WX2 424 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 USP17L1Q7RTZ2 530 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 NLGN2Q8NFZ4 835 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 SENP2Q9HC62 589 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 BRPF3Q9ULD4 1205 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 WDR19Q8NEZ3 1342 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 BRCA1P38398 1863 aaKnown RBP17.07■□□□□ 0.32
COL4A6-206ENST00000477085 BAZ2AQ9UIF9 1905 aaKnown RBP17.07■□□□□ 0.32
COL4A6-206ENST00000477085 KDM4AO75164 1064 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 IGDCC4Q8TDY8 1250 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 PCDHAC2Q9Y5I4 1007 aa17.07■□□□□ 0.32
COL4A6-206ENST00000477085 PDIA3P30101 505 aaKnown RBP17.06■□□□□ 0.32
COL4A6-206ENST00000477085 USP5P45974 858 aa17.06■□□□□ 0.32
COL4A6-206ENST00000477085 FGD1P98174 961 aa17.06■□□□□ 0.32
COL4A6-206ENST00000477085 SCRN1Q12765 414 aa17.06■□□□□ 0.32
COL4A6-206ENST00000477085 NFKBIBQ15653 356 aa17.06■□□□□ 0.32
COL4A6-206ENST00000477085 APOBEC3HQ6NTF7 200 aaKnown RBP17.06■□□□□ 0.32
COL4A6-206ENST00000477085 KIAA0825Q8IV33 1275 aa17.06■□□□□ 0.32
COL4A6-206ENST00000477085 SLF2Q8IX21 1173 aa17.06■□□□□ 0.32
COL4A6-206ENST00000477085 MCM9Q9NXL9 1143 aa17.06■□□□□ 0.32
COL4A6-206ENST00000477085 ADAMTSL1Q8N6G6 1762 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 PFKFB2O60825 505 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 SLC4A8Q2Y0W8 1093 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 RRP12Q5JTH9 1297 aaKnown RBP17.05■□□□□ 0.32
COL4A6-206ENST00000477085 MAPKAPK5Q8IW41 473 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 TNPO1Q92973 898 aaKnown RBP17.05■□□□□ 0.32
COL4A6-206ENST00000477085 GTF3C6Q969F1 213 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 NOL10Q9BSC4 688 aaKnown RBP17.05■□□□□ 0.32
COL4A6-206ENST00000477085 CNNM2Q9H8M5 875 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 NFKBIEO00221 500 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 SH2B2O14492 632 aaPredicted RBP17.05■□□□□ 0.32
COL4A6-206ENST00000477085 SOGA3Q5TF21 947 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 C12orf60Q5U649 245 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 HHIPL2Q6UWX4 724 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 TEX11Q8IYF3 940 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 LARGE2Q8N3Y3 721 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 KRT23Q9C075 422 aa17.05■□□□□ 0.32
COL4A6-206ENST00000477085 ARPP21Q9UBL0 812 aaPredicted RBP17.05■□□□□ 0.32
COL4A6-206ENST00000477085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL4A6-206ENST00000477085 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.05■□□□□ 0.32
COL4A6-206ENST00000477085 PRDM1O75626 825 aa17.04■□□□□ 0.32
COL4A6-206ENST00000477085 CRKP46108 304 aa17.04■□□□□ 0.32
COL4A6-206ENST00000477085 PLCD1P51178 756 aa17.04■□□□□ 0.32
COL4A6-206ENST00000477085 ZNF274Q96GC6 653 aaPredicted RBP17.04■□□□□ 0.32
COL4A6-206ENST00000477085 RNF41Q9H4P4 317 aaPredicted RBP17.04■□□□□ 0.32
COL4A6-206ENST00000477085 SAP30BPQ9UHR5 308 aaKnown RBP17.04■□□□□ 0.32
COL4A6-206ENST00000477085 HPS5Q9UPZ3 1129 aa17.04■□□□□ 0.32
COL4A6-206ENST00000477085 FLT1P17948 1338 aa17.03■□□□□ 0.32
COL4A6-206ENST00000477085 WDHD1O75717 1129 aaPredicted RBP17.03■□□□□ 0.32
COL4A6-206ENST00000477085 RAD17O75943 681 aa17.03■□□□□ 0.32
COL4A6-206ENST00000477085 CTDNEP1O95476 244 aa17.03■□□□□ 0.32
COL4A6-206ENST00000477085 GJB2P29033 226 aa17.03■□□□□ 0.32
COL4A6-206ENST00000477085 CCT2P78371 535 aaKnown RBP17.03■□□□□ 0.32
COL4A6-206ENST00000477085 NBR1Q14596 966 aa17.03■□□□□ 0.32
COL4A6-206ENST00000477085 CERS3Q8IU89 383 aa17.03■□□□□ 0.32
COL4A6-206ENST00000477085 ZKSCAN3Q9BRR0 538 aa17.03■□□□□ 0.32
COL4A6-206ENST00000477085 MRIQ9BWK5 157 aa17.03■□□□□ 0.32
COL4A6-206ENST00000477085 VPS33BQ9H267 617 aa17.03■□□□□ 0.32
COL4A6-206ENST00000477085 LY9Q9HBG7 655 aa17.03■□□□□ 0.32
COL4A6-206ENST00000477085 NCOA5Q9HCD5 579 aaKnown RBP17.03■□□□□ 0.32
COL4A6-206ENST00000477085 ANGEL1Q9UNK9 670 aaKnown RBP17.03■□□□□ 0.32
COL4A6-206ENST00000477085 BCS1LQ9Y276 419 aa17.03■□□□□ 0.32
COL4A6-206ENST00000477085 PLCG2P16885 1265 aa17.02■□□□□ 0.32
COL4A6-206ENST00000477085 IARSP41252 1262 aaKnown RBP17.02■□□□□ 0.32
COL4A6-206ENST00000477085 PRELPP51888 382 aa17.02■□□□□ 0.32
COL4A6-206ENST00000477085 CDC42EP5Q6NZY7 148 aa17.02■□□□□ 0.32
COL4A6-206ENST00000477085 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
COL4A6-206ENST00000477085 DYNLL2Q96FJ2 89 aa17.02■□□□□ 0.32
COL4A6-206ENST00000477085 ZDHHC15Q96MV8 337 aa17.02■□□□□ 0.32
COL4A6-206ENST00000477085 DDX4Q9NQI0 724 aaKnown RBP17.02■□□□□ 0.32
COL4A6-206ENST00000477085 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
COL4A6-206ENST00000477085 SMC3Q9UQE7 1217 aa17.02■□□□□ 0.32
COL4A6-206ENST00000477085 CDK5RAP2Q96SN8 1893 aa17.02■□□□□ 0.31
COL4A6-206ENST00000477085 KLF18A0A0U1RQI7 1052 aa17.02■□□□□ 0.31
COL4A6-206ENST00000477085 PSMD14O00487 310 aa17.02■□□□□ 0.31
COL4A6-206ENST00000477085 JAK2O60674 1132 aa17.02■□□□□ 0.31
COL4A6-206ENST00000477085 VIL1P09327 827 aaKnown RBP17.02■□□□□ 0.31
COL4A6-206ENST00000477085 NUCB2P80303 420 aa17.02■□□□□ 0.31
COL4A6-206ENST00000477085 RAB11FIP4Q86YS3 637 aa17.02■□□□□ 0.31
COL4A6-206ENST00000477085 TMEM87BQ96K49 555 aa17.02■□□□□ 0.31
COL4A6-206ENST00000477085 USP40Q9NVE5 1235 aa17.02■□□□□ 0.31
COL4A6-206ENST00000477085 ORC4O43929 436 aa17.01■□□□□ 0.31
COL4A6-206ENST00000477085 TMEM67Q5HYA8 995 aa17.01■□□□□ 0.31
COL4A6-206ENST00000477085 GMLQ99445 158 aa17.01■□□□□ 0.31
COL4A6-206ENST00000477085 TAOK3Q9H2K8 898 aa17.01■□□□□ 0.31
COL4A6-206ENST00000477085 SPON1Q9HCB6 807 aa17.01■□□□□ 0.31
COL4A6-206ENST00000477085 UTRNP46939 3433 aa17.01■□□□□ 0.31
COL4A6-206ENST00000477085 FER1L6Q2WGJ9 1857 aa17.01■□□□□ 0.31
COL4A6-206ENST00000477085 IFIT3O14879 490 aaKnown RBP17■□□□□ 0.31
COL4A6-206ENST00000477085 BRD1O95696 1058 aa17■□□□□ 0.31
COL4A6-206ENST00000477085 HDLBPQ00341 1268 aaKnown RBP17■□□□□ 0.31
COL4A6-206ENST00000477085 RSBN1LQ6PCB5 846 aaPredicted RBP17■□□□□ 0.31
COL4A6-206ENST00000477085 ESR2Q92731 530 aa17■□□□□ 0.31
COL4A6-206ENST00000477085 ZNRF3Q9ULT6 936 aa17■□□□□ 0.31
COL4A6-206ENST00000477085 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
COL4A6-206ENST00000477085 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms