RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 NOP53Q9NZM5 478 aaKnown RBP10.4□□□□□ -0.74
CHD6-207ENST00000476641 A0A087WZG4 1122 aa10.39□□□□□ -0.75
CHD6-207ENST00000476641 KRT24Q2M2I5 525 aa10.39□□□□□ -0.75
CHD6-207ENST00000476641 ZCCHC2Q9C0B9 1178 aaKnown RBP10.39□□□□□ -0.75
CHD6-207ENST00000476641 DOLKQ9UPQ8 538 aa10.39□□□□□ -0.75
CHD6-207ENST00000476641 PCDHGC4Q9Y5F7 938 aa10.39□□□□□ -0.75
CHD6-207ENST00000476641 KIF13BQ9NQT8 1826 aa10.39□□□□□ -0.75
CHD6-207ENST00000476641 ATP10DQ9P241 1426 aa10.39□□□□□ -0.75
CHD6-207ENST00000476641 APBB1O00213 710 aa10.38□□□□□ -0.75
CHD6-207ENST00000476641 USP4Q13107 963 aa10.38□□□□□ -0.75
CHD6-207ENST00000476641 WDR43Q15061 677 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHD6-207ENST00000476641 HLFQ16534 295 aa10.38□□□□□ -0.75
CHD6-207ENST00000476641 TSGA10IPQ3SY00 556 aa10.38□□□□□ -0.75
CHD6-207ENST00000476641 PRR5LQ6MZQ0 368 aa10.38□□□□□ -0.75
CHD6-207ENST00000476641 ARHGAP27Q6ZUM4 889 aa10.38□□□□□ -0.75
CHD6-207ENST00000476641 DNAAF2Q9NVR5 837 aaKnown RBP10.38□□□□□ -0.75
CHD6-207ENST00000476641 TSPYL4Q9UJ04 414 aa10.38□□□□□ -0.75
CHD6-207ENST00000476641 DLG5Q8TDM6 1919 aa10.38□□□□□ -0.75
CHD6-207ENST00000476641 ADCY9O60503 1353 aa10.38□□□□□ -0.75
CHD6-207ENST00000476641 CHD4Q14839 1912 aa10.37□□□□□ -0.75
CHD6-207ENST00000476641 FAM177BA6PVY3 158 aa10.37□□□□□ -0.75
CHD6-207ENST00000476641 ANXA1P04083 346 aa10.37□□□□□ -0.75
CHD6-207ENST00000476641 PROSER3Q2NL68 480 aa10.37□□□□□ -0.75
CHD6-207ENST00000476641 TTLL7Q6ZT98 887 aa10.37□□□□□ -0.75
CHD6-207ENST00000476641 C2CD5Q86YS7 1000 aa10.37□□□□□ -0.75
CHD6-207ENST00000476641 SNRKQ9NRH2 765 aa10.37□□□□□ -0.75
CHD6-207ENST00000476641 PIM2Q9P1W9 311 aa10.37□□□□□ -0.75
CHD6-207ENST00000476641 SCN7AQ01118 1682 aa10.37□□□□□ -0.75
CHD6-207ENST00000476641 MYL6BP14649 208 aa10.36□□□□□ -0.75
CHD6-207ENST00000476641 ZEB1P37275 1124 aaPredicted RBP10.36□□□□□ -0.75
CHD6-207ENST00000476641 DALRD3Q5D0E6 543 aaKnown RBP10.36□□□□□ -0.75
CHD6-207ENST00000476641 CHSY3Q70JA7 882 aa10.36□□□□□ -0.75
CHD6-207ENST00000476641 PNISRQ8TF01 805 aaKnown RBP10.36□□□□□ -0.75
CHD6-207ENST00000476641 RUNDC1Q96C34 613 aa10.36□□□□□ -0.75
CHD6-207ENST00000476641 PNNQ9H307 717 aaKnown RBP10.36□□□□□ -0.75
CHD6-207ENST00000476641 LAS1LQ9Y4W2 734 aaKnown RBP10.36□□□□□ -0.75
CHD6-207ENST00000476641 KDM3BQ7LBC6 1761 aa10.35□□□□□ -0.75
CHD6-207ENST00000476641 EIF2S2P20042 333 aaKnown RBP10.35□□□□□ -0.75
CHD6-207ENST00000476641 ATP4AP20648 1035 aa10.35□□□□□ -0.75
CHD6-207ENST00000476641 PRELPP51888 382 aa10.35□□□□□ -0.75
CHD6-207ENST00000476641 SETDB2Q96T68 719 aa10.35□□□□□ -0.75
CHD6-207ENST00000476641 AFDNP55196 1824 aaKnown RBP10.35□□□□□ -0.75
CHD6-207ENST00000476641 NRXN2Q9P2S2 1712 aa10.34□□□□□ -0.75
CHD6-207ENST00000476641 APAF1O14727 1248 aa10.34□□□□□ -0.75
CHD6-207ENST00000476641 ATXN7O15265 892 aaPredicted RBP10.34□□□□□ -0.75
CHD6-207ENST00000476641 ADH6P28332 368 aa10.34□□□□□ -0.75
CHD6-207ENST00000476641 OXLD1Q5BKU9 147 aa10.34□□□□□ -0.75
CHD6-207ENST00000476641 LRP10Q7Z4F1 713 aa10.34□□□□□ -0.75
CHD6-207ENST00000476641 NPM2Q86SE8 214 aaKnown RBP10.34□□□□□ -0.75
CHD6-207ENST00000476641 NLRP8Q86W28 1048 aa10.34□□□□□ -0.75
CHD6-207ENST00000476641 CNBD1Q8NA66 436 aa10.34□□□□□ -0.75
CHD6-207ENST00000476641 C1orf216Q8TAB5 229 aa10.34□□□□□ -0.75
CHD6-207ENST00000476641 ZNF428Q96B54 188 aa10.34□□□□□ -0.75
CHD6-207ENST00000476641 AIDAQ96BJ3 306 aa10.34□□□□□ -0.75
CHD6-207ENST00000476641 NIP7Q9Y221 180 aaKnown RBP eCLIP10.34□□□□□ -0.75
CHD6-207ENST00000476641 CEP350Q5VT06 3117 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 DCDC2BA2VCK2 349 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 CHL1O00533 1208 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 GPTP24298 496 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 ITGB7P26010 798 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 DOC2BQ14184 412 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 SLFNL1Q499Z3 407 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 C9orf131Q5VYM1 1079 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 SLC51AQ86UW1 340 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 NBPF5PQ86XG9 351 aaPredicted RBP10.33□□□□□ -0.76
CHD6-207ENST00000476641 PHTF2Q8N3S3 785 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 ZNF622Q969S3 477 aaKnown RBP eCLIP10.33□□□□□ -0.762e-6■■□□□ 11.9
CHD6-207ENST00000476641 SEMA6BQ9H3T3 888 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 KLF15Q9UIH9 416 aa10.33□□□□□ -0.76
CHD6-207ENST00000476641 BRCA1P38398 1863 aaKnown RBP10.32□□□□□ -0.76
CHD6-207ENST00000476641 ABCC12Q96J65 1359 aa10.32□□□□□ -0.76
CHD6-207ENST00000476641 H0YIN7 160 aa10.32□□□□□ -0.76
CHD6-207ENST00000476641 NPHP1O15259 732 aa10.32□□□□□ -0.76
CHD6-207ENST00000476641 CD33P20138 364 aa10.32□□□□□ -0.76
CHD6-207ENST00000476641 LMOD3Q0VAK6 560 aa10.32□□□□□ -0.76
CHD6-207ENST00000476641 PSMG3-AS1Q96PY0 264 aa10.32□□□□□ -0.76
CHD6-207ENST00000476641 BRIP1Q9BX63 1249 aa10.32□□□□□ -0.76
CHD6-207ENST00000476641 NIFKQ9BYG3 293 aaKnown RBP10.32□□□□□ -0.76
CHD6-207ENST00000476641 HCN2Q9UL51 889 aa10.32□□□□□ -0.76
CHD6-207ENST00000476641 ANKRD31Q8N7Z5 1873 aa10.32□□□□□ -0.76
CHD6-207ENST00000476641 MAP3K15Q6ZN16 1313 aa10.32□□□□□ -0.76
CHD6-207ENST00000476641 UBN2Q6ZU65 1347 aa10.32□□□□□ -0.76
CHD6-207ENST00000476641 BCORQ6W2J9 1755 aa10.31□□□□□ -0.76
CHD6-207ENST00000476641 COL11A2P13942 1736 aaPredicted RBP10.31□□□□□ -0.76
CHD6-207ENST00000476641 NFKBIEO00221 500 aa10.31□□□□□ -0.76
CHD6-207ENST00000476641 MAPTP10636 758 aaKnown RBP10.31□□□□□ -0.76
CHD6-207ENST00000476641 SCNN1DP51172 638 aa10.31□□□□□ -0.76
CHD6-207ENST00000476641 GDF10P55107 478 aa10.31□□□□□ -0.76
CHD6-207ENST00000476641 C1QTNF8P60827 252 aa10.31□□□□□ -0.76
CHD6-207ENST00000476641 OLFM4Q6UX06 510 aa10.31□□□□□ -0.76
CHD6-207ENST00000476641 CLEC4GQ6UXB4 293 aa10.31□□□□□ -0.76
CHD6-207ENST00000476641 FCHSD1Q86WN1 690 aa10.31□□□□□ -0.76
CHD6-207ENST00000476641 TTLL6Q8N841 843 aa10.31□□□□□ -0.76
CHD6-207ENST00000476641 RNF181Q9P0P0 153 aa10.31□□□□□ -0.76
CHD6-207ENST00000476641 LAMB4A4D0S4 1761 aa10.3□□□□□ -0.76
CHD6-207ENST00000476641 KHNYNO15037 678 aaKnown RBP10.3□□□□□ -0.76
CHD6-207ENST00000476641 C21orf2O43822 256 aa10.3□□□□□ -0.76
CHD6-207ENST00000476641 INHAP05111 366 aa10.3□□□□□ -0.76
CHD6-207ENST00000476641 SRGNP10124 158 aa10.3□□□□□ -0.76
CHD6-207ENST00000476641 ST5P78524 1137 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms