RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 RAI14Q9P0K7 980 aa13.27□□□□□ -0.29
SEC13-214ENST00000476597 DDTLA6NHG4 134 aaPredicted RBP13.26□□□□□ -0.29
SEC13-214ENST00000476597 PHF20L1A8MW92 1017 aa13.26□□□□□ -0.29
SEC13-214ENST00000476597 TAF1CQ15572 869 aaPredicted RBP13.26□□□□□ -0.29
SEC13-214ENST00000476597 RFX7Q2KHR2 1363 aa13.26□□□□□ -0.29
SEC13-214ENST00000476597 TTC39AQ5SRH9 613 aa13.26□□□□□ -0.29
SEC13-214ENST00000476597 ATRNL1Q5VV63 1379 aa13.26□□□□□ -0.29
SEC13-214ENST00000476597 EAF2Q96CJ1 260 aaPredicted RBP13.26□□□□□ -0.29
SEC13-214ENST00000476597 ERO1AQ96HE7 468 aa13.26□□□□□ -0.29
SEC13-214ENST00000476597 ZCCHC17Q9NP64 241 aaKnown RBP13.26□□□□□ -0.29
SEC13-214ENST00000476597 SNRKQ9NRH2 765 aa13.26□□□□□ -0.29
SEC13-214ENST00000476597 LRP2BPQ9P2M1 347 aa13.26□□□□□ -0.29
SEC13-214ENST00000476597 KCNH4Q9UQ05 1017 aa13.26□□□□□ -0.29
SEC13-214ENST00000476597 TRIM17Q9Y577 477 aa13.26□□□□□ -0.29
SEC13-214ENST00000476597 BTBD19C9JJ37 291 aa13.25□□□□□ -0.29
SEC13-214ENST00000476597 IGSF3O75054 1194 aa13.25□□□□□ -0.29
SEC13-214ENST00000476597 CYP2E1P05181 493 aaPredicted RBP13.25□□□□□ -0.29
SEC13-214ENST00000476597 OTOP1Q7RTM1 612 aa13.25□□□□□ -0.29
SEC13-214ENST00000476597 ZSCAN29Q8IWY8 852 aaPredicted RBP13.25□□□□□ -0.29
SEC13-214ENST00000476597 CCDC8Q9H0W5 538 aaPredicted RBP13.25□□□□□ -0.29
SEC13-214ENST00000476597 DBNLQ9UJU6 430 aaKnown RBP13.25□□□□□ -0.29
SEC13-214ENST00000476597 HTTP42858 3142 aa13.24□□□□□ -0.29
SEC13-214ENST00000476597 TBC1D12O60347 775 aa13.24□□□□□ -0.29
SEC13-214ENST00000476597 SLURP2P0DP57 97 aa13.24□□□□□ -0.29
SEC13-214ENST00000476597 PICALMQ13492 652 aa13.24□□□□□ -0.29
SEC13-214ENST00000476597 MOGSQ13724 837 aa13.24□□□□□ -0.29
SEC13-214ENST00000476597 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
SEC13-214ENST00000476597 CD99L2Q8TCZ2 262 aa13.24□□□□□ -0.29
SEC13-214ENST00000476597 EFCC1Q9HA90 598 aa13.24□□□□□ -0.29
SEC13-214ENST00000476597 PTPN22Q9Y2R2 807 aa13.24□□□□□ -0.29
SEC13-214ENST00000476597 CXCL11O14625 94 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 TLR2O60603 784 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 ZAP70P43403 619 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 SOX10P56693 466 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 PPP4CP60510 307 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 CAP1Q01518 475 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 NAA16Q6N069 864 aaPredicted RBP13.23□□□□□ -0.29
SEC13-214ENST00000476597 ANKRD23Q86SG2 305 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 ERC1Q8IUD2 1116 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 RPAP2Q8IXW5 612 aaPredicted RBP13.23□□□□□ -0.29
SEC13-214ENST00000476597 SCYL3Q8IZE3 742 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 ZBTB40Q9NUA8 1239 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 TLR7Q9NYK1 1049 aaKnown RBP13.23□□□□□ -0.29
SEC13-214ENST00000476597 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 DDX19BQ9UMR2 479 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 EXOC6BQ9Y2D4 811 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
SEC13-214ENST00000476597 CTNND1O60716 968 aaKnown RBP13.22□□□□□ -0.29
SEC13-214ENST00000476597 BAG3O95817 575 aa13.22□□□□□ -0.29
SEC13-214ENST00000476597 PTPRAP18433 802 aa13.22□□□□□ -0.29
SEC13-214ENST00000476597 ARHGEF6Q15052 776 aa13.22□□□□□ -0.29
SEC13-214ENST00000476597 HSP90AB4PQ58FF6 505 aa13.22□□□□□ -0.29
SEC13-214ENST00000476597 PICK1Q9NRD5 415 aa13.22□□□□□ -0.29
SEC13-214ENST00000476597 ZHX2Q9Y6X8 837 aa13.22□□□□□ -0.29
SEC13-214ENST00000476597 TNRC18O15417 2968 aaPredicted RBP13.21□□□□□ -0.29
SEC13-214ENST00000476597 PDHXO00330 501 aa13.21□□□□□ -0.29
SEC13-214ENST00000476597 C17orf99Q6UX52 265 aa13.21□□□□□ -0.29
SEC13-214ENST00000476597 ADGRA1Q86SQ6 560 aa13.21□□□□□ -0.29
SEC13-214ENST00000476597 SIRT2Q8IXJ6 389 aa13.21□□□□□ -0.29
SEC13-214ENST00000476597 TEX11Q8IYF3 940 aa13.21□□□□□ -0.29
SEC13-214ENST00000476597 RHPN1Q8TCX5 695 aa13.21□□□□□ -0.29
SEC13-214ENST00000476597 SH3RF3Q8TEJ3 882 aaPredicted RBP13.21□□□□□ -0.29
SEC13-214ENST00000476597 OSBPL5Q9H0X9 879 aaPredicted RBP13.21□□□□□ -0.29
SEC13-214ENST00000476597 PIH1D3Q9NQM4 214 aaKnown RBP13.21□□□□□ -0.29
SEC13-214ENST00000476597 AATFQ9NY61 560 aaKnown RBP eCLIP13.21□□□□□ -0.29
SEC13-214ENST00000476597 AFG3L2Q9Y4W6 797 aa13.21□□□□□ -0.29
SEC13-214ENST00000476597 OTOFQ9HC10 1997 aa13.21□□□□□ -0.29
SEC13-214ENST00000476597 PLCG2P16885 1265 aa13.2□□□□□ -0.3
SEC13-214ENST00000476597 GPAT2Q6NUI2 795 aa13.2□□□□□ -0.3
SEC13-214ENST00000476597 NOL10Q9BSC4 688 aaKnown RBP13.2□□□□□ -0.3
SEC13-214ENST00000476597 CHMP4BQ9H444 224 aaKnown RBP13.2□□□□□ -0.3
SEC13-214ENST00000476597 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.2□□□□□ -0.3
SEC13-214ENST00000476597 LAMB1P07942 1786 aa13.2□□□□□ -0.3
SEC13-214ENST00000476597 MYH13Q9UKX3 1938 aa13.19□□□□□ -0.3
SEC13-214ENST00000476597 A0A0G2JLL6 359 aaPredicted RBP13.19□□□□□ -0.3
SEC13-214ENST00000476597 HMMRO75330 724 aa13.19□□□□□ -0.3
SEC13-214ENST00000476597 PDE3AQ14432 1141 aa13.19□□□□□ -0.3
SEC13-214ENST00000476597 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
SEC13-214ENST00000476597 PRRT2Q7Z6L0 340 aaPredicted RBP13.19□□□□□ -0.3
SEC13-214ENST00000476597 AACSQ86V21 672 aa13.19□□□□□ -0.3
SEC13-214ENST00000476597 TGFBRAP1Q8WUH2 860 aa13.19□□□□□ -0.3
SEC13-214ENST00000476597 DHX36Q9H2U1 1008 aaKnown RBP13.19□□□□□ -0.3
SEC13-214ENST00000476597 IL1RAPL2Q9NP60 686 aa13.19□□□□□ -0.3
SEC13-214ENST00000476597 CENPFP49454 3210 aa13.18□□□□□ -0.3
SEC13-214ENST00000476597 CYP7A1P22680 504 aa13.18□□□□□ -0.3
SEC13-214ENST00000476597 LACTBP83111 547 aaPredicted RBP13.18□□□□□ -0.3
SEC13-214ENST00000476597 KIF22Q14807 665 aa13.18□□□□□ -0.3
SEC13-214ENST00000476597 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
SEC13-214ENST00000476597 FOXP4Q8IVH2 680 aaPredicted RBP13.18□□□□□ -0.3
SEC13-214ENST00000476597 ARMC5Q96C12 935 aa13.18□□□□□ -0.3
SEC13-214ENST00000476597 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
SEC13-214ENST00000476597 ANTXR1Q9H6X2 564 aa13.18□□□□□ -0.3
SEC13-214ENST00000476597 PI4KBQ9UBF8 816 aa13.18□□□□□ -0.3
SEC13-214ENST00000476597 CPA4Q9UI42 421 aa13.18□□□□□ -0.3
SEC13-214ENST00000476597 HERC5Q9UII4 1024 aaKnown RBP13.18□□□□□ -0.3
SEC13-214ENST00000476597 NDUFB9Q9Y6M9 179 aa13.18□□□□□ -0.3
SEC13-214ENST00000476597 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
SEC13-214ENST00000476597 COL2A1P02458 1487 aaPredicted RBP13.17□□□□□ -0.3
SEC13-214ENST00000476597 ADGRA2Q96PE1 1338 aa13.17□□□□□ -0.3
SEC13-214ENST00000476597 FAM196BA6NMK8 535 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms