RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 UACAQ9BZF9 1416 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 NUTM2FA1L443 756 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 SPDYE3A6NKU9 549 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 ANKRD65E5RJM6 399 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 CAPN5O15484 640 aaPredicted RBP4.73□□□□□ -1.65
CD55-208ENST00000476590 ATP6V1G1O75348 118 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 EZRP15311 586 aaKnown RBP4.73□□□□□ -1.65
CD55-208ENST00000476590 GCLCP48506 637 aaPredicted RBP4.73□□□□□ -1.65
CD55-208ENST00000476590 TBX4P57082 545 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 CAMK2BQ13554 666 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 GJC2Q5T442 439 aaPredicted RBP4.73□□□□□ -1.65
CD55-208ENST00000476590 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 SOGA3Q5TF21 947 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 TLDC1Q6P9B6 456 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 SLC30A9Q6PML9 568 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 TMEM110Q86TL2 294 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 NEK9Q8TD19 979 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 AGBL1Q96MI9 1066 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 ZFP42Q96MM3 310 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 EPAS1Q99814 870 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 L2HGDHQ9H9P8 463 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 ATP6V0A4Q9HBG4 840 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 ITM2BQ9Y287 266 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 CNTNAP5Q8WYK1 1306 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 SPATA31E1Q6ZUB1 1445 aa4.73□□□□□ -1.65
CD55-208ENST00000476590 ENO4A6NNW6 628 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 HMGB1P1B2RPK0 211 aaPredicted RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 MYO1BO43795 1136 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 ZNF189O75820 626 aaPredicted RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 PTGS1P23219 599 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 INPP5BP32019 993 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 MAGEA10P43363 369 aaPredicted RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 ROR2Q01974 943 aaKnown RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 KCNB1Q14721 858 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 POSTNQ15063 836 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 CCDC158Q5M9N0 1113 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 ANKRD13BQ86YJ7 626 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 CCDC65Q8IXS2 484 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 LMBR1Q8WVP7 490 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 TAF4BQ92750 862 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 CCDC85AQ96PX6 553 aaPredicted RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 ALS2CR12Q96Q35 445 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 RPS6KC1Q96S38 1066 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 CD248Q9HCU0 757 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 DNAAF2Q9NVR5 837 aaKnown RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 ORC3Q9UBD5 711 aaPredicted RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 PRKAG2Q9UGJ0 569 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 PUF60Q9UHX1 559 aaKnown RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 NRBP1Q9UHY1 535 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 WDR37Q9Y2I8 494 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.72□□□□□ -1.65
CD55-208ENST00000476590 COL4A3BPQ9Y5P4 624 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 AATKQ6ZMQ8 1374 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 ATXN2Q99700 1313 aaKnown RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 LRRC10BA6NIK2 292 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 SKAP2O75563 359 aaPredicted RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 SASH3O75995 380 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 TUBB4AP04350 444 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 YY1P25490 414 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 HOXA10P31260 410 aaPredicted RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 MAP3K9P80192 1104 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 PDE3AQ14432 1141 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 MFSD10Q14728 455 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 KIAA0753Q2KHM9 967 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 Q4G0T1 1027 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 CCDC92Q53HC0 331 aaPredicted RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 CC2D1AQ6P1N0 951 aaPredicted RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 OTUD6AQ7L8S5 288 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 FBXO33Q7Z6M2 555 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 CCDC50Q8IVM0 306 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 CEP112Q8N8E3 955 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 MAGEC3Q8TD91 643 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 ARHGAP45Q92619 1136 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 KCNN1Q92952 543 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 JAKMIP2Q96AA8 810 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 TRIM11Q96F44 468 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 RBM41Q96IZ5 413 aaKnown RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 RSRC1Q96IZ7 334 aaKnown RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 ZSWIM4Q9H7M6 989 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 GPCPD1Q9NPB8 672 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 NSFL1CQ9UNZ2 370 aaKnown RBP4.72□□□□□ -1.65
CD55-208ENST00000476590 ANKRD30AQ9BXX3 1397 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 ARAP1Q96P48 1450 aa4.72□□□□□ -1.65
CD55-208ENST00000476590 NPHP1O15259 732 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 SRGAP3O43295 1099 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 NEMFO60524 1076 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 HMMRO75330 724 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 STK10O94804 968 aaKnown RBP4.71□□□□□ -1.65
CD55-208ENST00000476590 KCNA2P16389 499 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 FERP16591 822 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 RPL13P26373 211 aaKnown RBP4.71□□□□□ -1.65
CD55-208ENST00000476590 GBP2P32456 591 aaPredicted RBP4.71□□□□□ -1.65
CD55-208ENST00000476590 COPB2P35606 906 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 SLC4A8Q2Y0W8 1093 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 LDLRAD1Q5T700 205 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 THEMIS2Q5TEJ8 643 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 CAPRIN2Q6IMN6 1127 aaKnown RBP4.71□□□□□ -1.65
CD55-208ENST00000476590 TTLL7Q6ZT98 887 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 BRAPQ7Z569 592 aa4.71□□□□□ -1.65
CD55-208ENST00000476590 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms