RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 ZSCAN29Q8IWY8 852 aaPredicted RBP35.61■■■■□ 3.29
HOXB3-208ENST00000476342 SSC5DA1L4H1 1573 aa35.61■■■■□ 3.29
HOXB3-208ENST00000476342 PPP1R12BO60237 982 aaPredicted RBP35.6■■■■□ 3.29
HOXB3-208ENST00000476342 MBD4O95243 580 aa35.6■■■■□ 3.29
HOXB3-208ENST00000476342 USP5P45974 858 aa35.6■■■■□ 3.29
HOXB3-208ENST00000476342 TTLL12Q14166 644 aaPredicted RBP35.6■■■■□ 3.29
HOXB3-208ENST00000476342 CDAN1Q8IWY9 1227 aa35.6■■■■□ 3.29
HOXB3-208ENST00000476342 PUS7LQ9H0K6 701 aaKnown RBP35.6■■■■□ 3.29
HOXB3-208ENST00000476342 OSBPL5Q9H0X9 879 aaPredicted RBP35.6■■■■□ 3.29
HOXB3-208ENST00000476342 COL2A1P02458 1487 aaPredicted RBP35.59■■■■□ 3.29
HOXB3-208ENST00000476342 FLT1P17948 1338 aa35.59■■■■□ 3.29
HOXB3-208ENST00000476342 ZFPM1Q8IX07 1006 aa35.59■■■■□ 3.29
HOXB3-208ENST00000476342 LCORLQ8N3X6 602 aa35.59■■■■□ 3.29
HOXB3-208ENST00000476342 TLL2Q9Y6L7 1015 aa35.59■■■■□ 3.29
HOXB3-208ENST00000476342 ARMC9Q7Z3E5 817 aa35.58■■■■□ 3.29
HOXB3-208ENST00000476342 MAPKAPK5Q8IW41 473 aa35.58■■■■□ 3.29
HOXB3-208ENST00000476342 ARMT1Q9H993 441 aa35.58■■■■□ 3.29
HOXB3-208ENST00000476342 ATRNL1Q5VV63 1379 aa35.58■■■■□ 3.29
HOXB3-208ENST00000476342 SAPCD2Q86UD0 394 aa35.57■■■■□ 3.29
HOXB3-208ENST00000476342 OSBP2Q969R2 916 aa35.57■■■■□ 3.29
HOXB3-208ENST00000476342 CSRNP1Q96S65 589 aa35.57■■■■□ 3.29
HOXB3-208ENST00000476342 GSPT1P15170 499 aaKnown RBP35.57■■■■□ 3.28
HOXB3-208ENST00000476342 PRKG1Q13976 671 aa35.57■■■■□ 3.28
HOXB3-208ENST00000476342 HTRA3P83110 453 aa35.56■■■■□ 3.28
HOXB3-208ENST00000476342 ZMYM1Q5SVZ6 1142 aa35.56■■■■□ 3.28
HOXB3-208ENST00000476342 DCAF15Q66K64 600 aa35.56■■■■□ 3.28
HOXB3-208ENST00000476342 MYH1P12882 1939 aa35.55■■■■□ 3.28
HOXB3-208ENST00000476342 HUNKP57058 714 aa35.55■■■■□ 3.28
HOXB3-208ENST00000476342 DHX36Q9H2U1 1008 aaKnown RBP35.55■■■■□ 3.28
HOXB3-208ENST00000476342 ANGEL1Q9UNK9 670 aaKnown RBP35.55■■■■□ 3.28
HOXB3-208ENST00000476342 NAV1Q8NEY1 1877 aa35.54■■■■□ 3.28
HOXB3-208ENST00000476342 DDTLA6NHG4 134 aaPredicted RBP35.54■■■■□ 3.28
HOXB3-208ENST00000476342 SH3BP5LQ7L8J4 393 aa35.54■■■■□ 3.28
HOXB3-208ENST00000476342 IREB2P48200 963 aaKnown RBP35.53■■■■□ 3.28
HOXB3-208ENST00000476342 HIP1O00291 1037 aa35.52■■■■□ 3.28
HOXB3-208ENST00000476342 MAP3K11Q16584 847 aa35.52■■■■□ 3.28
HOXB3-208ENST00000476342 MOB2Q70IA6 237 aa35.52■■■■□ 3.28
HOXB3-208ENST00000476342 HHIPL1Q96JK4 782 aa35.52■■■■□ 3.28
HOXB3-208ENST00000476342 RASSF10A6NK89 507 aa35.51■■■■□ 3.28
HOXB3-208ENST00000476342 GPAA1O43292 621 aa35.51■■■■□ 3.28
HOXB3-208ENST00000476342 SDSP20132 328 aa35.51■■■■□ 3.28
HOXB3-208ENST00000476342 SKAP1Q86WV1 359 aa35.51■■■■□ 3.28
HOXB3-208ENST00000476342 SDR42E1Q8WUS8 393 aa35.51■■■■□ 3.28
HOXB3-208ENST00000476342 STRBPQ96SI9 672 aaKnown RBP35.51■■■■□ 3.28
HOXB3-208ENST00000476342 ATP8A2Q9NTI2 1148 aa35.51■■■■□ 3.28
HOXB3-208ENST00000476342 SLC4A4Q9Y6R1 1079 aa35.51■■■■□ 3.28
HOXB3-208ENST00000476342 M0R2C6 588 aa35.5■■■■□ 3.27
HOXB3-208ENST00000476342 DDRGK1Q96HY6 314 aa35.5■■■■□ 3.27
HOXB3-208ENST00000476342 HELLSQ9NRZ9 838 aa35.5■■■■□ 3.27
HOXB3-208ENST00000476342 FZD1Q9UP38 647 aa35.5■■■■□ 3.27
HOXB3-208ENST00000476342 USP2O75604 605 aaPredicted RBP35.49■■■■□ 3.27
HOXB3-208ENST00000476342 GNAT2P19087 354 aa35.49■■■■□ 3.27
HOXB3-208ENST00000476342 DEFB115Q30KQ5 88 aa35.49■■■■□ 3.27
HOXB3-208ENST00000476342 SEC62Q99442 399 aaKnown RBP35.49■■■■□ 3.27
HOXB3-208ENST00000476342 DDX60LQ5H9U9 1706 aaKnown RBP35.49■■■■□ 3.27
HOXB3-208ENST00000476342 UBE2Q2LH0YL09 131 aa35.49■■■■□ 3.27
HOXB3-208ENST00000476342 HLA-DOAP06340 250 aa35.49■■■■□ 3.27
HOXB3-208ENST00000476342 MIGA2Q7L4E1 593 aa35.49■■■■□ 3.27
HOXB3-208ENST00000476342 ZNF341Q9BYN7 854 aa35.49■■■■□ 3.27
HOXB3-208ENST00000476342 DCP1AQ9NPI6 582 aaPredicted RBP35.49■■■■□ 3.27
HOXB3-208ENST00000476342 DIAPH3Q9NSV4 1193 aa35.49■■■■□ 3.27
HOXB3-208ENST00000476342 PI4KBQ9UBF8 816 aa35.49■■■■□ 3.27
HOXB3-208ENST00000476342 SAP30BPQ9UHR5 308 aaKnown RBP35.49■■■■□ 3.27
HOXB3-208ENST00000476342 UNCXA6NJT0 531 aa35.48■■■■□ 3.27
HOXB3-208ENST00000476342 MKRN1Q9UHC7 482 aaKnown RBP35.48■■■■□ 3.27
HOXB3-208ENST00000476342 PALD1Q9ULE6 856 aa35.48■■■■□ 3.27
HOXB3-208ENST00000476342 PRKAB2O43741 272 aa35.47■■■■□ 3.27
HOXB3-208ENST00000476342 PAXIP1Q6ZW49 1069 aaPredicted RBP35.47■■■■□ 3.27
HOXB3-208ENST00000476342 OTOFQ9HC10 1997 aa35.46■■■■□ 3.27
HOXB3-208ENST00000476342 NMIQ13287 307 aaPredicted RBP35.46■■■■□ 3.27
HOXB3-208ENST00000476342 MCMDC2Q4G0Z9 681 aa35.46■■■■□ 3.27
HOXB3-208ENST00000476342 KLRG1Q96E93 195 aa35.46■■■■□ 3.27
HOXB3-208ENST00000476342 FAM227BQ96M60 508 aa35.46■■■■□ 3.27
HOXB3-208ENST00000476342 MCM9Q9NXL9 1143 aa35.46■■■■□ 3.27
HOXB3-208ENST00000476342 BAZ2AQ9UIF9 1905 aaKnown RBP35.45■■■■□ 3.27
HOXB3-208ENST00000476342 A0A0D9SFI3 127 aa35.45■■■■□ 3.27
HOXB3-208ENST00000476342 LDLRAD1Q5T700 205 aa35.45■■■■□ 3.27
HOXB3-208ENST00000476342 RGMBQ6NW40 437 aa35.45■■■■□ 3.27
HOXB3-208ENST00000476342 TTC6Q86TZ1 520 aa35.45■■■■□ 3.27
HOXB3-208ENST00000476342 ANKRD13AQ8IZ07 590 aa35.45■■■■□ 3.27
HOXB3-208ENST00000476342 TBC1D12O60347 775 aa35.44■■■■□ 3.26
HOXB3-208ENST00000476342 MAP3K10Q02779 954 aa35.44■■■■□ 3.26
HOXB3-208ENST00000476342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP35.44■■■■□ 3.26
HOXB3-208ENST00000476342 WRNIP1Q96S55 665 aa35.44■■■■□ 3.26
HOXB3-208ENST00000476342 HERC5Q9UII4 1024 aaKnown RBP35.44■■■■□ 3.26
HOXB3-208ENST00000476342 SIPA1L1O43166 1804 aa35.44■■■■□ 3.26
HOXB3-208ENST00000476342 POLR3DP05423 398 aaPredicted RBP35.43■■■■□ 3.26
HOXB3-208ENST00000476342 AMOTL1Q8IY63 956 aa35.43■■■■□ 3.26
HOXB3-208ENST00000476342 TRIM34Q9BYJ4 488 aa35.43■■■■□ 3.26
HOXB3-208ENST00000476342 ECE1P42892 770 aa35.42■■■■□ 3.26
HOXB3-208ENST00000476342 ZNF157P51786 506 aaPredicted RBP35.42■■■■□ 3.26
HOXB3-208ENST00000476342 BMP2KLQ5H9B9 411 aa35.42■■■■□ 3.26
HOXB3-208ENST00000476342 GIMAP6Q6P9H5 292 aa35.42■■■■□ 3.26
HOXB3-208ENST00000476342 FOXP4Q8IVH2 680 aaPredicted RBP35.42■■■■□ 3.26
HOXB3-208ENST00000476342 XPO5Q9HAV4 1204 aaKnown RBP eCLIP35.42■■■■□ 3.26
HOXB3-208ENST00000476342 MAP3K9P80192 1104 aa35.41■■■■□ 3.26
HOXB3-208ENST00000476342 SLC4A8Q2Y0W8 1093 aa35.41■■■■□ 3.26
HOXB3-208ENST00000476342 CWC27Q6UX04 472 aaKnown RBP35.41■■■■□ 3.26
HOXB3-208ENST00000476342 CRACR2BQ8N4Y2 399 aaPredicted RBP35.41■■■■□ 3.26
HOXB3-208ENST00000476342 CSADQ9Y600 493 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms