RNA–Protein interactions for RNA: ENST00000476335.1

ELL3-204, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 452 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-204ENST00000476335 PTPRAP18433 802 aa16.68■□□□□ 0.26
ELL3-204ENST00000476335 PRDX5P30044 214 aa16.68■□□□□ 0.26
ELL3-204ENST00000476335 SCYL3Q8IZE3 742 aa16.68■□□□□ 0.26
ELL3-204ENST00000476335 SLC45A1Q9Y2W3 748 aa16.68■□□□□ 0.26
ELL3-204ENST00000476335 AFG3L2Q9Y4W6 797 aa16.68■□□□□ 0.26
ELL3-204ENST00000476335 ZHX2Q9Y6X8 837 aa16.68■□□□□ 0.26
ELL3-204ENST00000476335 PTPRFP10586 1907 aa16.68■□□□□ 0.26
ELL3-204ENST00000476335 UNC80Q8N2C7 3258 aa16.67■□□□□ 0.26
ELL3-204ENST00000476335 DOCK3Q8IZD9 2030 aa16.67■□□□□ 0.26
ELL3-204ENST00000476335 DIS3LQ8TF46 1054 aaKnown RBP16.67■□□□□ 0.26
ELL3-204ENST00000476335 PAWRQ96IZ0 340 aaKnown RBP16.67■□□□□ 0.26
ELL3-204ENST00000476335 GDF15Q99988 308 aa16.67■□□□□ 0.26
ELL3-204ENST00000476335 USP40Q9NVE5 1235 aa16.67■□□□□ 0.26
ELL3-204ENST00000476335 DOCK2Q92608 1830 aa16.66■□□□□ 0.26
ELL3-204ENST00000476335 TNPO2O14787 897 aaKnown RBP16.66■□□□□ 0.26
ELL3-204ENST00000476335 MNX1P50219 401 aaPredicted RBP16.66■□□□□ 0.26
ELL3-204ENST00000476335 GADL1Q6ZQY3 521 aa16.66■□□□□ 0.26
ELL3-204ENST00000476335 LPIN2Q92539 896 aa16.66■□□□□ 0.26
ELL3-204ENST00000476335 PHIPQ8WWQ0 1821 aa16.66■□□□□ 0.26
ELL3-204ENST00000476335 SLC5A1P13866 664 aa16.65■□□□□ 0.26
ELL3-204ENST00000476335 BMP8BP34820 402 aa16.65■□□□□ 0.26
ELL3-204ENST00000476335 RFX5P48382 616 aaPredicted RBP16.65■□□□□ 0.26
ELL3-204ENST00000476335 MAP3K10Q02779 954 aa16.65■□□□□ 0.26
ELL3-204ENST00000476335 GPR153Q6NV75 609 aa16.65■□□□□ 0.26
ELL3-204ENST00000476335 SH3BP5LQ7L8J4 393 aa16.65■□□□□ 0.26
ELL3-204ENST00000476335 IDI2Q9BXS1 227 aa16.65■□□□□ 0.26
ELL3-204ENST00000476335 PICK1Q9NRD5 415 aa16.65■□□□□ 0.26
ELL3-204ENST00000476335 RFX7Q2KHR2 1363 aa16.64■□□□□ 0.26
ELL3-204ENST00000476335 EYA2O00167 538 aa16.64■□□□□ 0.25
ELL3-204ENST00000476335 LDHBP07195 334 aaKnown RBP16.64■□□□□ 0.25
ELL3-204ENST00000476335 SLURP2P0DP57 97 aa16.64■□□□□ 0.25
ELL3-204ENST00000476335 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.25
ELL3-204ENST00000476335 RGS3P49796 1198 aa16.64■□□□□ 0.25
ELL3-204ENST00000476335 NECAB2Q7Z6G3 386 aa16.64■□□□□ 0.25
ELL3-204ENST00000476335 SMCR8Q8TEV9 937 aaPredicted RBP16.64■□□□□ 0.25
ELL3-204ENST00000476335 SALL1Q9NSC2 1324 aa16.64■□□□□ 0.25
ELL3-204ENST00000476335 ENTPD3O75355 529 aa16.63■□□□□ 0.25
ELL3-204ENST00000476335 ATG9AQ7Z3C6 839 aa16.63■□□□□ 0.25
ELL3-204ENST00000476335 ANKRD13CQ8N6S4 541 aa16.63■□□□□ 0.25
ELL3-204ENST00000476335 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.63■□□□□ 0.25
ELL3-204ENST00000476335 USP44Q9H0E7 712 aa16.63■□□□□ 0.25
ELL3-204ENST00000476335 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.63■□□□□ 0.25
ELL3-204ENST00000476335 DOCK1Q14185 1865 aa16.63■□□□□ 0.25
ELL3-204ENST00000476335 DDTLA6NHG4 134 aaPredicted RBP16.62■□□□□ 0.25
ELL3-204ENST00000476335 TRIM75PA6NK02 468 aa16.62■□□□□ 0.25
ELL3-204ENST00000476335 C7orf61Q8IZ16 206 aa16.62■□□□□ 0.25
ELL3-204ENST00000476335 DEFB123Q8N688 67 aa16.62■□□□□ 0.25
ELL3-204ENST00000476335 ANKLE1Q8NAG6 615 aa16.62■□□□□ 0.25
ELL3-204ENST00000476335 COA7Q96BR5 231 aa16.62■□□□□ 0.25
ELL3-204ENST00000476335 TAOK2Q9UL54 1235 aa16.62■□□□□ 0.25
ELL3-204ENST00000476335 ZMYND8Q9ULU4 1186 aaPredicted RBP16.62■□□□□ 0.25
ELL3-204ENST00000476335 AGTPBP1Q9UPW5 1226 aa16.62■□□□□ 0.25
ELL3-204ENST00000476335 GAKO14976 1311 aa16.62■□□□□ 0.25
ELL3-204ENST00000476335 CTNND1O60716 968 aaKnown RBP16.61■□□□□ 0.25
ELL3-204ENST00000476335 FAM110CQ1W6H9 321 aa16.61■□□□□ 0.25
ELL3-204ENST00000476335 TREML2Q5T2D2 321 aa16.61■□□□□ 0.25
ELL3-204ENST00000476335 Q7L0L9 218 aa16.61■□□□□ 0.25
ELL3-204ENST00000476335 CCDC84Q86UT8 332 aaPredicted RBP16.61■□□□□ 0.25
ELL3-204ENST00000476335 DDX4Q9NQI0 724 aaKnown RBP16.61■□□□□ 0.25
ELL3-204ENST00000476335 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
ELL3-204ENST00000476335 LAMA2P24043 3122 aaKnown RBP16.61■□□□□ 0.25
ELL3-204ENST00000476335 MYH2Q9UKX2 1941 aa16.6■□□□□ 0.25
ELL3-204ENST00000476335 LRIT3Q3SXY7 679 aa16.6■□□□□ 0.25
ELL3-204ENST00000476335 ZSCAN29Q8IWY8 852 aaPredicted RBP16.6■□□□□ 0.25
ELL3-204ENST00000476335 MRPL50Q8N5N7 158 aaKnown RBP16.6■□□□□ 0.25
ELL3-204ENST00000476335 HMGCRP04035 888 aa16.59■□□□□ 0.25
ELL3-204ENST00000476335 PHKA1P46020 1223 aa16.59■□□□□ 0.25
ELL3-204ENST00000476335 TRIM32Q13049 653 aa16.59■□□□□ 0.25
ELL3-204ENST00000476335 ATP2B3Q16720 1220 aa16.59■□□□□ 0.25
ELL3-204ENST00000476335 MRS2Q9HD23 443 aa16.59■□□□□ 0.25
ELL3-204ENST00000476335 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
ELL3-204ENST00000476335 MTMR10Q9NXD2 777 aa16.59■□□□□ 0.25
ELL3-204ENST00000476335 GJD2Q9UKL4 321 aa16.59■□□□□ 0.25
ELL3-204ENST00000476335 DENND2AQ9ULE3 1009 aa16.59■□□□□ 0.25
ELL3-204ENST00000476335 STXBP5LQ9Y2K9 1186 aa16.59■□□□□ 0.25
ELL3-204ENST00000476335 SEMA3EO15041 775 aa16.58■□□□□ 0.24
ELL3-204ENST00000476335 ZBTB22O15209 634 aa16.58■□□□□ 0.24
ELL3-204ENST00000476335 SYN1P17600 705 aa16.58■□□□□ 0.24
ELL3-204ENST00000476335 MAGEA10P43363 369 aaPredicted RBP16.58■□□□□ 0.24
ELL3-204ENST00000476335 PROCA1Q8NCQ7 364 aaPredicted RBP16.58■□□□□ 0.24
ELL3-204ENST00000476335 NBPF3Q9H094 633 aa16.58■□□□□ 0.24
ELL3-204ENST00000476335 PNMA3Q9UL41 463 aa16.58■□□□□ 0.24
ELL3-204ENST00000476335 RPTORQ8N122 1335 aa16.58■□□□□ 0.24
ELL3-204ENST00000476335 DDX60LQ5H9U9 1706 aaKnown RBP16.58■□□□□ 0.24
ELL3-204ENST00000476335 LOC285556D6RIA3 1793 aa16.57■□□□□ 0.24
ELL3-204ENST00000476335 PTPRCP08575 1304 aa16.57■□□□□ 0.24
ELL3-204ENST00000476335 TDHQ8IZJ6 230 aa16.57■□□□□ 0.24
ELL3-204ENST00000476335 FAM163AQ96GL9 167 aaPredicted RBP16.57■□□□□ 0.24
ELL3-204ENST00000476335 PLXNB2O15031 1838 aa16.56■□□□□ 0.24
ELL3-204ENST00000476335 TBC1D12O60347 775 aa16.56■□□□□ 0.24
ELL3-204ENST00000476335 CIAO1O76071 339 aa16.56■□□□□ 0.24
ELL3-204ENST00000476335 GCLCP48506 637 aaPredicted RBP16.56■□□□□ 0.24
ELL3-204ENST00000476335 PICALMQ13492 652 aa16.56■□□□□ 0.24
ELL3-204ENST00000476335 SIL1Q9H173 461 aa16.56■□□□□ 0.24
ELL3-204ENST00000476335 C11orf49Q9H6J7 331 aa16.56■□□□□ 0.24
ELL3-204ENST00000476335 HMX1Q9NP08 348 aaPredicted RBP16.56■□□□□ 0.24
ELL3-204ENST00000476335 CEP126Q9P2H0 1117 aa16.56■□□□□ 0.24
ELL3-204ENST00000476335 FBXO3Q9UK99 471 aa16.56■□□□□ 0.24
ELL3-204ENST00000476335 OGDHLQ9ULD0 1010 aa16.56■□□□□ 0.24
ELL3-204ENST00000476335 VCANP13611 3396 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms