RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 ZAP70P43403 619 aa21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 RHBDL3P58872 404 aa21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 NOM1Q5C9Z4 860 aaKnown RBP21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 OTUD7BQ6GQQ9 843 aa21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 AACSQ86V21 672 aa21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 ERO1BQ86YB8 467 aa21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 ZSCAN29Q8IWY8 852 aaPredicted RBP21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 SIRT2Q8IXJ6 389 aa21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 RHPN1Q8TCX5 695 aa21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 MS4A4AQ96JQ5 239 aa21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 R3HDMLQ9H3Y0 253 aa21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 IL1RAPL2Q9NP60 686 aa21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 DDX4Q9NQI0 724 aaKnown RBP21.9■■□□□ 1.1
RAPGEF3-208ENST00000476259 GTF2A2P52657 109 aa21.89■■□□□ 1.09
RAPGEF3-208ENST00000476259 PTPN18Q99952 460 aa21.89■■□□□ 1.09
RAPGEF3-208ENST00000476259 ZNF112Q9UJU3 913 aa21.89■■□□□ 1.09
RAPGEF3-208ENST00000476259 ATRNL1Q5VV63 1379 aa21.88■■□□□ 1.09
RAPGEF3-208ENST00000476259 ATAD5Q96QE3 1844 aa21.88■■□□□ 1.09
RAPGEF3-208ENST00000476259 CCL15-CCL14A0A0B4J2E2 113 aa21.88■■□□□ 1.09
RAPGEF3-208ENST00000476259 APBB1O00213 710 aa21.88■■□□□ 1.09
RAPGEF3-208ENST00000476259 CCL15Q16663 113 aa21.88■■□□□ 1.09
RAPGEF3-208ENST00000476259 NAA16Q6N069 864 aaPredicted RBP21.88■■□□□ 1.09
RAPGEF3-208ENST00000476259 SH3BP5LQ7L8J4 393 aa21.88■■□□□ 1.09
RAPGEF3-208ENST00000476259 CTU1Q7Z7A3 348 aaKnown RBP21.88■■□□□ 1.09
RAPGEF3-208ENST00000476259 NOL10Q9BSC4 688 aaKnown RBP21.88■■□□□ 1.09
RAPGEF3-208ENST00000476259 DDTLA6NHG4 134 aaPredicted RBP21.87■■□□□ 1.09
RAPGEF3-208ENST00000476259 FKTNO75072 461 aa21.87■■□□□ 1.09
RAPGEF3-208ENST00000476259 MAP4K4O95819 1239 aaPredicted RBP21.87■■□□□ 1.09
RAPGEF3-208ENST00000476259 BRI3BPQ8WY22 251 aa21.87■■□□□ 1.09
RAPGEF3-208ENST00000476259 KIF1BPQ96EK5 621 aa21.87■■□□□ 1.09
RAPGEF3-208ENST00000476259 PIH1D3Q9NQM4 214 aaKnown RBP21.87■■□□□ 1.09
RAPGEF3-208ENST00000476259 CCDC85CA6NKD9 419 aa21.86■■□□□ 1.09
RAPGEF3-208ENST00000476259 PPATQ06203 517 aa21.86■■□□□ 1.09
RAPGEF3-208ENST00000476259 PPIL2Q13356 520 aa21.86■■□□□ 1.09
RAPGEF3-208ENST00000476259 PHIPQ8WWQ0 1821 aa21.85■■□□□ 1.09
RAPGEF3-208ENST00000476259 IRF6O14896 467 aa21.85■■□□□ 1.09
RAPGEF3-208ENST00000476259 NPM3O75607 178 aaKnown RBP21.85■■□□□ 1.09
RAPGEF3-208ENST00000476259 CRHR2Q13324 411 aa21.85■■□□□ 1.09
RAPGEF3-208ENST00000476259 NOL9Q5SY16 702 aaKnown RBP21.85■■□□□ 1.09
RAPGEF3-208ENST00000476259 TEX11Q8IYF3 940 aa21.85■■□□□ 1.09
RAPGEF3-208ENST00000476259 CLASRPQ8N2M8 674 aaKnown RBP21.85■■□□□ 1.09
RAPGEF3-208ENST00000476259 AATFQ9NY61 560 aaKnown RBP eCLIP21.85■■□□□ 1.09
RAPGEF3-208ENST00000476259 NDUFB9Q9Y6M9 179 aa21.85■■□□□ 1.09
RAPGEF3-208ENST00000476259 SIPA1L1O43166 1804 aa21.85■■□□□ 1.09
RAPGEF3-208ENST00000476259 PTPRFP10586 1907 aa21.84■■□□□ 1.09
RAPGEF3-208ENST00000476259 COL2A1P02458 1487 aaPredicted RBP21.84■■□□□ 1.09
RAPGEF3-208ENST00000476259 IGSF3O75054 1194 aa21.84■■□□□ 1.09
RAPGEF3-208ENST00000476259 RAB11FIP3O75154 756 aa21.84■■□□□ 1.09
RAPGEF3-208ENST00000476259 BAG3O95817 575 aa21.84■■□□□ 1.09
RAPGEF3-208ENST00000476259 CETPP11597 493 aa21.84■■□□□ 1.09
RAPGEF3-208ENST00000476259 SH3RF3Q8TEJ3 882 aaPredicted RBP21.84■■□□□ 1.09
RAPGEF3-208ENST00000476259 MYH1P12882 1939 aa21.84■■□□□ 1.09
RAPGEF3-208ENST00000476259 PHF20L1A8MW92 1017 aa21.83■■□□□ 1.09
RAPGEF3-208ENST00000476259 IDH1O75874 414 aaKnown RBP21.83■■□□□ 1.09
RAPGEF3-208ENST00000476259 MAP3K10Q02779 954 aa21.83■■□□□ 1.09
RAPGEF3-208ENST00000476259 SNAPC2Q13487 334 aa21.83■■□□□ 1.09
RAPGEF3-208ENST00000476259 ADGRA1Q86SQ6 560 aa21.83■■□□□ 1.09
RAPGEF3-208ENST00000476259 OSBPL5Q9H0X9 879 aaPredicted RBP21.83■■□□□ 1.09
RAPGEF3-208ENST00000476259 BCL11AQ9H165 835 aa21.83■■□□□ 1.09
RAPGEF3-208ENST00000476259 SLURP2P0DP57 97 aa21.82■■□□□ 1.08
RAPGEF3-208ENST00000476259 PLCG2P16885 1265 aa21.82■■□□□ 1.08
RAPGEF3-208ENST00000476259 TAF1CQ15572 869 aaPredicted RBP21.82■■□□□ 1.08
RAPGEF3-208ENST00000476259 FAM43AQ8N2R8 423 aa21.82■■□□□ 1.08
RAPGEF3-208ENST00000476259 IFIT2P09913 472 aaKnown RBP21.81■■□□□ 1.08
RAPGEF3-208ENST00000476259 PPP4CP60510 307 aa21.81■■□□□ 1.08
RAPGEF3-208ENST00000476259 SCYL3Q8IZE3 742 aa21.81■■□□□ 1.08
RAPGEF3-208ENST00000476259 YTHDC1Q96MU7 727 aaKnown RBP21.81■■□□□ 1.08
RAPGEF3-208ENST00000476259 ANTXR1Q9H6X2 564 aa21.81■■□□□ 1.08
RAPGEF3-208ENST00000476259 PKN2Q16513 984 aaKnown RBP21.8■■□□□ 1.08
RAPGEF3-208ENST00000476259 MYH7P12883 1935 aa21.8■■□□□ 1.08
RAPGEF3-208ENST00000476259 BTBD19C9JJ37 291 aa21.79■■□□□ 1.08
RAPGEF3-208ENST00000476259 TBC1D12O60347 775 aa21.79■■□□□ 1.08
RAPGEF3-208ENST00000476259 CYP7A1P22680 504 aa21.79■■□□□ 1.08
RAPGEF3-208ENST00000476259 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.79■■□□□ 1.08
RAPGEF3-208ENST00000476259 ZFYVE28Q9HCC9 887 aa21.79■■□□□ 1.08
RAPGEF3-208ENST00000476259 PICK1Q9NRD5 415 aa21.79■■□□□ 1.08
RAPGEF3-208ENST00000476259 KCNH4Q9UQ05 1017 aa21.79■■□□□ 1.08
RAPGEF3-208ENST00000476259 FAM196BA6NMK8 535 aa21.78■■□□□ 1.08
RAPGEF3-208ENST00000476259 CTNND1O60716 968 aaKnown RBP21.78■■□□□ 1.08
RAPGEF3-208ENST00000476259 MAP3K12Q12852 859 aa21.78■■□□□ 1.08
RAPGEF3-208ENST00000476259 MAGEB6Q8N7X4 407 aa21.78■■□□□ 1.08
RAPGEF3-208ENST00000476259 TGFBRAP1Q8WUH2 860 aa21.78■■□□□ 1.08
RAPGEF3-208ENST00000476259 ERO1AQ96HE7 468 aa21.78■■□□□ 1.08
RAPGEF3-208ENST00000476259 ZCCHC17Q9NP64 241 aaKnown RBP21.78■■□□□ 1.08
RAPGEF3-208ENST00000476259 PTPRAP18433 802 aa21.77■■□□□ 1.08
RAPGEF3-208ENST00000476259 DYNLL1P63167 89 aaKnown RBP21.77■■□□□ 1.08
RAPGEF3-208ENST00000476259 SP3Q02447 781 aa21.77■■□□□ 1.08
RAPGEF3-208ENST00000476259 TTF1Q15361 905 aaPredicted RBP21.77■■□□□ 1.08
RAPGEF3-208ENST00000476259 MAPKAPK5Q8IW41 473 aa21.77■■□□□ 1.08
RAPGEF3-208ENST00000476259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.77■■□□□ 1.08
RAPGEF3-208ENST00000476259 NAV1Q8NEY1 1877 aa21.77■■□□□ 1.08
RAPGEF3-208ENST00000476259 FLT1P17948 1338 aa21.77■■□□□ 1.07
RAPGEF3-208ENST00000476259 ZSWIM8A7E2V4 1837 aa21.76■■□□□ 1.07
RAPGEF3-208ENST00000476259 MIGA1Q8NAN2 632 aa21.76■■□□□ 1.07
RAPGEF3-208ENST00000476259 CD99L2Q8TCZ2 262 aa21.76■■□□□ 1.07
RAPGEF3-208ENST00000476259 DNAJC2Q99543 621 aaKnown RBP21.76■■□□□ 1.07
RAPGEF3-208ENST00000476259 LRRCC1Q9C099 1032 aa21.76■■□□□ 1.07
RAPGEF3-208ENST00000476259 DHX36Q9H2U1 1008 aaKnown RBP21.76■■□□□ 1.07
RAPGEF3-208ENST00000476259 ZHX2Q9Y6X8 837 aa21.76■■□□□ 1.07
RAPGEF3-208ENST00000476259 CXCL11O14625 94 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms