RNA–Protein interactions for RNA: ENST00000476173.5

TMEM254-211, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-211ENST00000476173 PRKAB2O43741 272 aa11.74□□□□□ -0.53
TMEM254-211ENST00000476173 WDHD1O75717 1129 aaPredicted RBP11.74□□□□□ -0.53
TMEM254-211ENST00000476173 CACNB3P54284 484 aa11.74□□□□□ -0.53
TMEM254-211ENST00000476173 NFIAQ12857 509 aa11.74□□□□□ -0.53
TMEM254-211ENST00000476173 PNMA8AQ86V59 439 aaPredicted RBP11.74□□□□□ -0.53
TMEM254-211ENST00000476173 TEX11Q8IYF3 940 aa11.74□□□□□ -0.53
TMEM254-211ENST00000476173 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
TMEM254-211ENST00000476173 IDI2Q9BXS1 227 aa11.74□□□□□ -0.53
TMEM254-211ENST00000476173 CRNKL1Q9BZJ0 848 aaKnown RBP11.74□□□□□ -0.53
TMEM254-211ENST00000476173 PGAP2Q9UHJ9 254 aa11.74□□□□□ -0.53
TMEM254-211ENST00000476173 SLC4A4Q9Y6R1 1079 aa11.74□□□□□ -0.53
TMEM254-211ENST00000476173 ECM29Q5VYK3 1845 aa11.74□□□□□ -0.53
TMEM254-211ENST00000476173 CDK5RAP2Q96SN8 1893 aa11.74□□□□□ -0.53
TMEM254-211ENST00000476173 GSG1L2A8MUP6 293 aa11.73□□□□□ -0.53
TMEM254-211ENST00000476173 PATL2C9JE40 543 aaKnown RBP11.73□□□□□ -0.53
TMEM254-211ENST00000476173 GNAT2P19087 354 aa11.73□□□□□ -0.53
TMEM254-211ENST00000476173 YY1P25490 414 aa11.73□□□□□ -0.53
TMEM254-211ENST00000476173 MFAP1P55081 439 aaKnown RBP11.73□□□□□ -0.53
TMEM254-211ENST00000476173 C8orf34Q49A92 452 aa11.73□□□□□ -0.53
TMEM254-211ENST00000476173 EAPPQ56P03 285 aaPredicted RBP11.73□□□□□ -0.53
TMEM254-211ENST00000476173 VPS53Q5VIR6 699 aa11.73□□□□□ -0.53
TMEM254-211ENST00000476173 ANGEL2Q5VTE6 544 aaKnown RBP11.73□□□□□ -0.53
TMEM254-211ENST00000476173 FKBP1CQ5VVH2 108 aa11.73□□□□□ -0.53
TMEM254-211ENST00000476173 TGFBRAP1Q8WUH2 860 aa11.73□□□□□ -0.53
TMEM254-211ENST00000476173 SDR42E1Q8WUS8 393 aa11.73□□□□□ -0.53
TMEM254-211ENST00000476173 VEZTQ9HBM0 779 aa11.73□□□□□ -0.53
TMEM254-211ENST00000476173 GPBP1L1Q9HC44 474 aaPredicted RBP11.73□□□□□ -0.53
TMEM254-211ENST00000476173 DDX4Q9NQI0 724 aaKnown RBP11.73□□□□□ -0.53
TMEM254-211ENST00000476173 FAM198AQ9UFP1 575 aa11.73□□□□□ -0.53
TMEM254-211ENST00000476173 MKRN1Q9UHC7 482 aaKnown RBP11.73□□□□□ -0.53
TMEM254-211ENST00000476173 CNTNAP1P78357 1384 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 RPAP1Q9BWH6 1393 aaPredicted RBP11.72□□□□□ -0.53
TMEM254-211ENST00000476173 PITPNM2Q9BZ72 1349 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 TCP10L2B9ZVM9 353 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 ENTPD3O75355 529 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 POTEIP0CG38 1075 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 USP5P45974 858 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 TCP10Q12799 353 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 ZFPM1Q8IX07 1006 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 DCP1AQ9NPI6 582 aaPredicted RBP11.72□□□□□ -0.53
TMEM254-211ENST00000476173 ATP8A2Q9NTI2 1148 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 GGA3Q9NZ52 723 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 TMOD2Q9NZR1 351 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 SCAF8Q9UPN6 1271 aaKnown RBP11.72□□□□□ -0.53
TMEM254-211ENST00000476173 FOCADQ5VW36 1801 aa11.72□□□□□ -0.53
TMEM254-211ENST00000476173 FLT1P17948 1338 aa11.71□□□□□ -0.53
TMEM254-211ENST00000476173 HSPD1P10809 573 aaKnown RBP11.71□□□□□ -0.53
TMEM254-211ENST00000476173 PTH1RQ03431 593 aa11.71□□□□□ -0.53
TMEM254-211ENST00000476173 PICALMQ13492 652 aa11.71□□□□□ -0.53
TMEM254-211ENST00000476173 ALX1Q15699 326 aa11.71□□□□□ -0.53
TMEM254-211ENST00000476173 GIMAP6Q6P9H5 292 aa11.71□□□□□ -0.53
TMEM254-211ENST00000476173 FAM83AQ86UY5 434 aa11.71□□□□□ -0.53
TMEM254-211ENST00000476173 LDHDQ86WU2 507 aa11.71□□□□□ -0.53
TMEM254-211ENST00000476173 APOBEC3FQ8IUX4 373 aaKnown RBP11.71□□□□□ -0.53
TMEM254-211ENST00000476173 MAPKAPK5Q8IW41 473 aa11.71□□□□□ -0.53
TMEM254-211ENST00000476173 DCPSQ96C86 337 aaKnown RBP11.71□□□□□ -0.53
TMEM254-211ENST00000476173 DSCC1Q9BVC3 393 aa11.71□□□□□ -0.53
TMEM254-211ENST00000476173 KIF3CO14782 793 aa11.7□□□□□ -0.54
TMEM254-211ENST00000476173 APPP05067 770 aa11.7□□□□□ -0.54
TMEM254-211ENST00000476173 TNFAIP1Q13829 316 aa11.7□□□□□ -0.54
TMEM254-211ENST00000476173 RASA3Q14644 834 aa11.7□□□□□ -0.54
TMEM254-211ENST00000476173 KIAA1211Q6ZU35 1233 aa11.7□□□□□ -0.54
TMEM254-211ENST00000476173 IFNL3Q8IZI9 196 aa11.7□□□□□ -0.54
TMEM254-211ENST00000476173 ZNF784Q8NCA9 323 aaPredicted RBP11.7□□□□□ -0.54
TMEM254-211ENST00000476173 FAM151AQ8WW52 585 aa11.7□□□□□ -0.54
TMEM254-211ENST00000476173 NACAP1Q9BZK3 213 aa11.7□□□□□ -0.54
TMEM254-211ENST00000476173 LSG1Q9H089 658 aaKnown RBP11.7□□□□□ -0.54
TMEM254-211ENST00000476173 OSBPL5Q9H0X9 879 aaPredicted RBP11.7□□□□□ -0.54
TMEM254-211ENST00000476173 DEFB129Q9H1M3 183 aa11.7□□□□□ -0.54
TMEM254-211ENST00000476173 EPB41L4AQ9HCS5 686 aaPredicted RBP11.7□□□□□ -0.54
TMEM254-211ENST00000476173 BAZ2AQ9UIF9 1905 aaKnown RBP11.7□□□□□ -0.54
TMEM254-211ENST00000476173 USP17L12C9JPN9 530 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 USP17L21D6R901 530 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 SEC24BO95487 1268 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 FGAP02671 866 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 TNNI2P48788 182 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 MAP1SQ66K74 1059 aaPredicted RBP11.69□□□□□ -0.54
TMEM254-211ENST00000476173 SH3BP5LQ7L8J4 393 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 KRT26Q7Z3Y9 468 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 SULF1Q8IWU6 871 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 MAP4K1Q92918 833 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 DDRGK1Q96HY6 314 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 TEPSINQ96N21 525 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 ANO2Q9NQ90 1003 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 SAP30BPQ9UHR5 308 aaKnown RBP11.69□□□□□ -0.54
TMEM254-211ENST00000476173 PALD1Q9ULE6 856 aa11.69□□□□□ -0.54
TMEM254-211ENST00000476173 MYH1P12882 1939 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 ATRNL1Q5VV63 1379 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 NAV1Q8NEY1 1877 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 DDTLA6NHG4 134 aaPredicted RBP11.68□□□□□ -0.54
TMEM254-211ENST00000476173 ADM5C9JUS6 153 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 REC8O95072 547 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 CHRM1P11229 460 aaPredicted RBP11.68□□□□□ -0.54
TMEM254-211ENST00000476173 TDO2P48775 406 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 SBK1Q52WX2 424 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 CTR9Q6PD62 1173 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 DLK2Q6UY11 383 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 CDC37L1Q7L3B6 337 aa11.68□□□□□ -0.54
TMEM254-211ENST00000476173 USP48Q86UV5 1035 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms