RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 TCP10L2B9ZVM9 353 aa18.31■□□□□ 0.52
SNX13-207ENST00000475800 CYP7A1P22680 504 aa18.31■□□□□ 0.52
SNX13-207ENST00000475800 PPP4CP60510 307 aa18.31■□□□□ 0.52
SNX13-207ENST00000475800 FKBP1BP68106 108 aa18.31■□□□□ 0.52
SNX13-207ENST00000475800 SUPT20HL1Q3ZLR7 823 aa18.31■□□□□ 0.52
SNX13-207ENST00000475800 MAGEB6Q8N7X4 407 aa18.31■□□□□ 0.52
SNX13-207ENST00000475800 IDI2Q9BXS1 227 aa18.31■□□□□ 0.52
SNX13-207ENST00000475800 FZD1Q9UP38 647 aa18.31■□□□□ 0.52
SNX13-207ENST00000475800 PAPPA2Q9BXP8 1791 aa18.31■□□□□ 0.52
SNX13-207ENST00000475800 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
SNX13-207ENST00000475800 SLC9C2Q5TAH2 1124 aa18.3■□□□□ 0.52
SNX13-207ENST00000475800 TSHZ3Q63HK5 1081 aa18.3■□□□□ 0.52
SNX13-207ENST00000475800 HOOK2Q96ED9 719 aa18.3■□□□□ 0.52
SNX13-207ENST00000475800 CDK5RAP2Q96SN8 1893 aa18.29■□□□□ 0.52
SNX13-207ENST00000475800 FOCADQ5VW36 1801 aa18.29■□□□□ 0.52
SNX13-207ENST00000475800 ENTPD3O75355 529 aa18.29■□□□□ 0.52
SNX13-207ENST00000475800 PDE6AP16499 860 aa18.29■□□□□ 0.52
SNX13-207ENST00000475800 CACNB3P54284 484 aa18.29■□□□□ 0.52
SNX13-207ENST00000475800 RHBDL3P58872 404 aa18.29■□□□□ 0.52
SNX13-207ENST00000475800 CENPQQ7L2Z9 268 aaPredicted RBP18.29■□□□□ 0.52
SNX13-207ENST00000475800 KBTBD3Q8NAB2 608 aa18.29■□□□□ 0.52
SNX13-207ENST00000475800 FAM151AQ8WW52 585 aa18.29■□□□□ 0.52
SNX13-207ENST00000475800 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
SNX13-207ENST00000475800 OSBPL3Q9H4L5 887 aa18.29■□□□□ 0.52
SNX13-207ENST00000475800 MLLT1Q03111 559 aaPredicted RBP18.28■□□□□ 0.52
SNX13-207ENST00000475800 UBE3CQ15386 1083 aa18.28■□□□□ 0.52
SNX13-207ENST00000475800 AATFQ9NY61 560 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNX13-207ENST00000475800 RFX7Q2KHR2 1363 aa18.28■□□□□ 0.52
SNX13-207ENST00000475800 PPP1R12BO60237 982 aaPredicted RBP18.27■□□□□ 0.52
SNX13-207ENST00000475800 ZFYP08048 801 aaPredicted RBP18.27■□□□□ 0.52
SNX13-207ENST00000475800 ADD2P35612 726 aa18.27■□□□□ 0.52
SNX13-207ENST00000475800 ARMC9Q7Z3E5 817 aa18.27■□□□□ 0.52
SNX13-207ENST00000475800 ADGRA1Q86SQ6 560 aa18.27■□□□□ 0.52
SNX13-207ENST00000475800 TICAM2Q86XR7 235 aa18.27■□□□□ 0.52
SNX13-207ENST00000475800 PLEKHM2Q8IWE5 1019 aa18.27■□□□□ 0.52
SNX13-207ENST00000475800 TEX11Q8IYF3 940 aa18.27■□□□□ 0.52
SNX13-207ENST00000475800 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.52
SNX13-207ENST00000475800 TMEM39BQ9GZU3 492 aa18.27■□□□□ 0.52
SNX13-207ENST00000475800 SAGE1Q9NXZ1 904 aa18.27■□□□□ 0.52
SNX13-207ENST00000475800 ZNF532Q9HCE3 1301 aa18.26■□□□□ 0.51
SNX13-207ENST00000475800 WDHD1O75717 1129 aaPredicted RBP18.26■□□□□ 0.51
SNX13-207ENST00000475800 TBC1D8O95759 1140 aa18.26■□□□□ 0.51
SNX13-207ENST00000475800 RGS3P49796 1198 aa18.26■□□□□ 0.51
SNX13-207ENST00000475800 SOX10P56693 466 aa18.26■□□□□ 0.51
SNX13-207ENST00000475800 NFIAQ12857 509 aa18.26■□□□□ 0.51
SNX13-207ENST00000475800 EVI5LQ96CN4 794 aa18.26■□□□□ 0.51
SNX13-207ENST00000475800 TEPSINQ96N21 525 aa18.26■□□□□ 0.51
SNX13-207ENST00000475800 FAM198AQ9UFP1 575 aa18.26■□□□□ 0.51
SNX13-207ENST00000475800 COL2A1P02458 1487 aaPredicted RBP18.26■□□□□ 0.51
SNX13-207ENST00000475800 MAGEB6P1A0A0J9YX57 407 aa18.25■□□□□ 0.51
SNX13-207ENST00000475800 TCRBV5S4A2TA0A5A2 114 aa18.25■□□□□ 0.51
SNX13-207ENST00000475800 TCP10Q12799 353 aa18.25■□□□□ 0.51
SNX13-207ENST00000475800 NBPF12Q5TAG4 269 aaPredicted RBP18.25■□□□□ 0.51
SNX13-207ENST00000475800 SH3RF3Q8TEJ3 882 aaPredicted RBP18.25■□□□□ 0.51
SNX13-207ENST00000475800 ANGEL1Q9UNK9 670 aaKnown RBP18.25■□□□□ 0.51
SNX13-207ENST00000475800 MYH1P12882 1939 aa18.24■□□□□ 0.51
SNX13-207ENST00000475800 UNCXA6NJT0 531 aa18.24■□□□□ 0.51
SNX13-207ENST00000475800 DCAF15Q66K64 600 aa18.24■□□□□ 0.51
SNX13-207ENST00000475800 MIGA1Q8NAN2 632 aa18.24■□□□□ 0.51
SNX13-207ENST00000475800 FSD1Q9BTV5 496 aa18.24■□□□□ 0.51
SNX13-207ENST00000475800 SSC5DA1L4H1 1573 aa18.23■□□□□ 0.51
SNX13-207ENST00000475800 ATRNL1Q5VV63 1379 aa18.23■□□□□ 0.51
SNX13-207ENST00000475800 RNF113AO15541 343 aaKnown RBP18.23■□□□□ 0.51
SNX13-207ENST00000475800 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
SNX13-207ENST00000475800 PICALMQ13492 652 aa18.23■□□□□ 0.51
SNX13-207ENST00000475800 MAP3K11Q16584 847 aa18.23■□□□□ 0.51
SNX13-207ENST00000475800 ZSCAN29Q8IWY8 852 aaPredicted RBP18.23■□□□□ 0.51
SNX13-207ENST00000475800 RIOK1Q9BRS2 568 aaKnown RBP18.23■□□□□ 0.51
SNX13-207ENST00000475800 CRNKL1Q9BZJ0 848 aaKnown RBP18.23■□□□□ 0.51
SNX13-207ENST00000475800 DYNLL1P63167 89 aaKnown RBP18.22■□□□□ 0.51
SNX13-207ENST00000475800 APPBP2Q92624 585 aa18.22■□□□□ 0.51
SNX13-207ENST00000475800 OSBPL5Q9H0X9 879 aaPredicted RBP18.22■□□□□ 0.51
SNX13-207ENST00000475800 DHX36Q9H2U1 1008 aaKnown RBP18.22■□□□□ 0.51
SNX13-207ENST00000475800 DDX4Q9NQI0 724 aaKnown RBP18.22■□□□□ 0.51
SNX13-207ENST00000475800 USP5P45974 858 aa18.21■□□□□ 0.51
SNX13-207ENST00000475800 TGFBRAP1Q8WUH2 860 aa18.21■□□□□ 0.51
SNX13-207ENST00000475800 PPP4R2Q9NY27 417 aa18.21■□□□□ 0.51
SNX13-207ENST00000475800 FLT1P17948 1338 aa18.21■□□□□ 0.51
SNX13-207ENST00000475800 NAV1Q8NEY1 1877 aa18.2■□□□□ 0.5
SNX13-207ENST00000475800 TRIM6-TRIM34B2RNG4 842 aa18.2■□□□□ 0.5
SNX13-207ENST00000475800 PDE4AP27815 886 aa18.2■□□□□ 0.5
SNX13-207ENST00000475800 CTU1Q7Z7A3 348 aaKnown RBP18.2■□□□□ 0.5
SNX13-207ENST00000475800 ZNF296Q8WUU4 475 aaPredicted RBP18.2■□□□□ 0.5
SNX13-207ENST00000475800 USP2O75604 605 aaPredicted RBP18.19■□□□□ 0.5
SNX13-207ENST00000475800 MBD4O95243 580 aa18.19■□□□□ 0.5
SNX13-207ENST00000475800 RGS19P49795 217 aa18.19■□□□□ 0.5
SNX13-207ENST00000475800 LDLRAD1Q5T700 205 aa18.19■□□□□ 0.5
SNX13-207ENST00000475800 MAPKAPK5Q8IW41 473 aa18.19■□□□□ 0.5
SNX13-207ENST00000475800 CDAN1Q8IWY9 1227 aa18.19■□□□□ 0.5
SNX13-207ENST00000475800 ZFPM1Q8IX07 1006 aa18.19■□□□□ 0.5
SNX13-207ENST00000475800 REM2Q8IYK8 340 aaPredicted RBP18.19■□□□□ 0.5
SNX13-207ENST00000475800 ZNF341Q9BYN7 854 aa18.19■□□□□ 0.5
SNX13-207ENST00000475800 R3HDMLQ9H3Y0 253 aa18.19■□□□□ 0.5
SNX13-207ENST00000475800 OTOFQ9HC10 1997 aa18.19■□□□□ 0.5
SNX13-207ENST00000475800 ANKRD13AQ8IZ07 590 aa18.18■□□□□ 0.5
SNX13-207ENST00000475800 LCORLQ8N3X6 602 aa18.18■□□□□ 0.5
SNX13-207ENST00000475800 RILPL2Q969X0 211 aa18.18■□□□□ 0.5
SNX13-207ENST00000475800 DDRGK1Q96HY6 314 aa18.18■□□□□ 0.5
SNX13-207ENST00000475800 CLMNQ96JQ2 1002 aa18.18■□□□□ 0.5
SNX13-207ENST00000475800 PUS7LQ9H0K6 701 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms