RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 SMCR8Q8TEV9 937 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-218ENST00000475657 C11orf49Q9H6J7 331 aa17.57■□□□□ 0.4
FAM3A-218ENST00000475657 CACNA1FO60840 1977 aa17.57■□□□□ 0.4
FAM3A-218ENST00000475657 PHF20L1A8MW92 1017 aa17.56■□□□□ 0.4
FAM3A-218ENST00000475657 PDE8BO95263 885 aa17.56■□□□□ 0.4
FAM3A-218ENST00000475657 SYN1P17600 705 aa17.56■□□□□ 0.4
FAM3A-218ENST00000475657 PTPRAP18433 802 aa17.56■□□□□ 0.4
FAM3A-218ENST00000475657 TCP10Q12799 353 aa17.56■□□□□ 0.4
FAM3A-218ENST00000475657 CDC42EP5Q6NZY7 148 aa17.56■□□□□ 0.4
FAM3A-218ENST00000475657 HMX1Q9NP08 348 aaPredicted RBP17.56■□□□□ 0.4
FAM3A-218ENST00000475657 PICK1Q9NRD5 415 aa17.56■□□□□ 0.4
FAM3A-218ENST00000475657 C9orf78Q9NZ63 289 aaPredicted RBP17.56■□□□□ 0.4
FAM3A-218ENST00000475657 OGDHLQ9ULD0 1010 aa17.56■□□□□ 0.4
FAM3A-218ENST00000475657 IL16Q14005 1332 aa17.55■□□□□ 0.4
FAM3A-218ENST00000475657 F6X3S4 739 aa17.55■□□□□ 0.4
FAM3A-218ENST00000475657 MAP3K10Q02779 954 aa17.55■□□□□ 0.4
FAM3A-218ENST00000475657 NFIAQ12857 509 aa17.55■□□□□ 0.4
FAM3A-218ENST00000475657 FAM110CQ1W6H9 321 aa17.55■□□□□ 0.4
FAM3A-218ENST00000475657 GADL1Q6ZQY3 521 aa17.55■□□□□ 0.4
FAM3A-218ENST00000475657 WWC1Q8IX03 1113 aa17.55■□□□□ 0.4
FAM3A-218ENST00000475657 VGLL2Q8N8G2 317 aa17.55■□□□□ 0.4
FAM3A-218ENST00000475657 WDR66Q8TBY9 1149 aa17.55■□□□□ 0.4
FAM3A-218ENST00000475657 FAM198AQ9UFP1 575 aa17.55■□□□□ 0.4
FAM3A-218ENST00000475657 TAOK2Q9UL54 1235 aa17.55■□□□□ 0.4
FAM3A-218ENST00000475657 ATRNL1Q5VV63 1379 aa17.54■□□□□ 0.4
FAM3A-218ENST00000475657 DOCK3Q8IZD9 2030 aa17.54■□□□□ 0.4
FAM3A-218ENST00000475657 VAMP4O75379 141 aa17.54■□□□□ 0.4
FAM3A-218ENST00000475657 ALDH1L1O75891 902 aa17.54■□□□□ 0.4
FAM3A-218ENST00000475657 GUCD1Q96NT3 240 aa17.54■□□□□ 0.4
FAM3A-218ENST00000475657 PRDM6Q9NQX0 595 aa17.54■□□□□ 0.4
FAM3A-218ENST00000475657 DAGLAQ9Y4D2 1042 aa17.54■□□□□ 0.4
FAM3A-218ENST00000475657 METTL24Q5JXM2 366 aa17.53■□□□□ 0.4
FAM3A-218ENST00000475657 ANKRD13CQ8N6S4 541 aa17.53■□□□□ 0.4
FAM3A-218ENST00000475657 KAZALD1Q96I82 304 aa17.53■□□□□ 0.4
FAM3A-218ENST00000475657 MRS2Q9HD23 443 aa17.53■□□□□ 0.4
FAM3A-218ENST00000475657 GJD2Q9UKL4 321 aa17.53■□□□□ 0.4
FAM3A-218ENST00000475657 PNMA3Q9UL41 463 aa17.53■□□□□ 0.4
FAM3A-218ENST00000475657 AGTPBP1Q9UPW5 1226 aa17.53■□□□□ 0.4
FAM3A-218ENST00000475657 GCLCP48506 637 aaPredicted RBP17.52■□□□□ 0.4
FAM3A-218ENST00000475657 CTNND1O60716 968 aaKnown RBP17.51■□□□□ 0.39
FAM3A-218ENST00000475657 ENTPD3O75355 529 aa17.51■□□□□ 0.39
FAM3A-218ENST00000475657 RABL6Q3YEC7 729 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-218ENST00000475657 LRRC24Q50LG9 513 aa17.51■□□□□ 0.39
FAM3A-218ENST00000475657 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
FAM3A-218ENST00000475657 USP40Q9NVE5 1235 aa17.51■□□□□ 0.39
FAM3A-218ENST00000475657 COL2A1P02458 1487 aaPredicted RBP17.5■□□□□ 0.39
FAM3A-218ENST00000475657 PFASO15067 1338 aa17.5■□□□□ 0.39
FAM3A-218ENST00000475657 SPTBN5Q9NRC6 3674 aaKnown RBP17.5■□□□□ 0.39
FAM3A-218ENST00000475657 IFIT1P09914 478 aaKnown RBP17.5■□□□□ 0.39
FAM3A-218ENST00000475657 COL6A1P12109 1028 aa17.5■□□□□ 0.39
FAM3A-218ENST00000475657 FGFR2P21802 821 aa17.5■□□□□ 0.39
FAM3A-218ENST00000475657 MAP3K21Q5TCX8 1036 aa17.5■□□□□ 0.39
FAM3A-218ENST00000475657 ZFPM1Q8IX07 1006 aa17.5■□□□□ 0.39
FAM3A-218ENST00000475657 SUCLG2Q96I99 432 aa17.5■□□□□ 0.39
FAM3A-218ENST00000475657 IDI2Q9BXS1 227 aa17.5■□□□□ 0.39
FAM3A-218ENST00000475657 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
FAM3A-218ENST00000475657 LRRFIP2Q9Y608 721 aaKnown RBP17.5■□□□□ 0.39
FAM3A-218ENST00000475657 UTYO14607 1347 aa17.49■□□□□ 0.39
FAM3A-218ENST00000475657 PUM3Q15397 648 aaKnown RBP17.49■□□□□ 0.39
FAM3A-218ENST00000475657 DIXDC1Q155Q3 683 aa17.49■□□□□ 0.39
FAM3A-218ENST00000475657 PROCA1Q8NCQ7 364 aaPredicted RBP17.49■□□□□ 0.39
FAM3A-218ENST00000475657 SRCIN1Q9C0H9 1055 aa17.49■□□□□ 0.39
FAM3A-218ENST00000475657 LAMA2P24043 3122 aaKnown RBP17.49■□□□□ 0.39
FAM3A-218ENST00000475657 AK9Q5TCS8 1911 aa17.49■□□□□ 0.39
FAM3A-218ENST00000475657 TRIM75PA6NK02 468 aa17.48■□□□□ 0.39
FAM3A-218ENST00000475657 TRIM32Q13049 653 aa17.48■□□□□ 0.39
FAM3A-218ENST00000475657 FANCIQ9NVI1 1328 aa17.47■□□□□ 0.39
FAM3A-218ENST00000475657 DDX60LQ5H9U9 1706 aaKnown RBP17.47■□□□□ 0.39
FAM3A-218ENST00000475657 XRCC5P13010 732 aaKnown RBP17.47■□□□□ 0.39
FAM3A-218ENST00000475657 RGS3P49796 1198 aa17.47■□□□□ 0.39
FAM3A-218ENST00000475657 TREML2Q5T2D2 321 aa17.47■□□□□ 0.39
FAM3A-218ENST00000475657 TRIB2Q92519 343 aa17.47■□□□□ 0.39
FAM3A-218ENST00000475657 LDHBP07195 334 aaKnown RBP17.46■□□□□ 0.39
FAM3A-218ENST00000475657 NBPF7P0C2Y1 421 aaPredicted RBP17.46■□□□□ 0.39
FAM3A-218ENST00000475657 PRDX5P30044 214 aa17.46■□□□□ 0.39
FAM3A-218ENST00000475657 PABPC4Q13310 644 aaKnown RBP eCLIP17.46■□□□□ 0.393e-7■■□□□ 14
FAM3A-218ENST00000475657 SH3BP5LQ7L8J4 393 aa17.46■□□□□ 0.39
FAM3A-218ENST00000475657 BICC1Q9H694 974 aaKnown RBP17.46■□□□□ 0.39
FAM3A-218ENST00000475657 PTPRFP10586 1907 aa17.46■□□□□ 0.39
FAM3A-218ENST00000475657 SALL1Q9NSC2 1324 aa17.46■□□□□ 0.38
FAM3A-218ENST00000475657 ZBTB22O15209 634 aa17.45■□□□□ 0.38
FAM3A-218ENST00000475657 PRKAR2AP13861 404 aaKnown RBP17.45■□□□□ 0.38
FAM3A-218ENST00000475657 MDM2Q00987 491 aaPredicted RBP17.45■□□□□ 0.38
FAM3A-218ENST00000475657 EXOSC9Q06265 439 aaKnown RBP17.45■□□□□ 0.38
FAM3A-218ENST00000475657 ZNF697Q5TEC3 545 aa17.45■□□□□ 0.38
FAM3A-218ENST00000475657 TRMT44Q8IYL2 757 aaKnown RBP17.45■□□□□ 0.38
FAM3A-218ENST00000475657 LPIN2Q92539 896 aa17.45■□□□□ 0.38
FAM3A-218ENST00000475657 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
FAM3A-218ENST00000475657 MORF4L1Q9UBU8 362 aa17.45■□□□□ 0.38
FAM3A-218ENST00000475657 RFX7Q2KHR2 1363 aa17.44■□□□□ 0.38
FAM3A-218ENST00000475657 TBC1D12O60347 775 aa17.44■□□□□ 0.38
FAM3A-218ENST00000475657 SLC5A1P13866 664 aa17.44■□□□□ 0.38
FAM3A-218ENST00000475657 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
FAM3A-218ENST00000475657 ZSCAN29Q8IWY8 852 aaPredicted RBP17.44■□□□□ 0.38
FAM3A-218ENST00000475657 ANKRD44Q8N8A2 993 aa17.44■□□□□ 0.38
FAM3A-218ENST00000475657 SYMPKQ92797 1274 aaKnown RBP17.44■□□□□ 0.38
FAM3A-218ENST00000475657 PRUNE2Q8WUY3 3088 aa17.43■□□□□ 0.38
FAM3A-218ENST00000475657 LHX8Q68G74 356 aa17.43■□□□□ 0.38
FAM3A-218ENST00000475657 SLC4A10Q6U841 1118 aa17.43■□□□□ 0.38
FAM3A-218ENST00000475657 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms