RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 YY1AP1Q9H869 796 aa20.29■□□□□ 0.84
CCM2-207ENST00000475551 CDC27P30260 824 aa20.28■□□□□ 0.84
CCM2-207ENST00000475551 IRX3P78415 501 aaPredicted RBP20.28■□□□□ 0.84
CCM2-207ENST00000475551 LONRF3Q496Y0 759 aa20.28■□□□□ 0.84
CCM2-207ENST00000475551 MB21D2Q8IYB1 491 aaPredicted RBP20.28■□□□□ 0.84
CCM2-207ENST00000475551 MAP3K14Q99558 947 aa20.28■□□□□ 0.84
CCM2-207ENST00000475551 DESI2Q9BSY9 194 aa20.28■□□□□ 0.84
CCM2-207ENST00000475551 GPR108Q9NPR9 543 aa20.28■□□□□ 0.84
CCM2-207ENST00000475551 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.28■□□□□ 0.84
CCM2-207ENST00000475551 COL22A1Q8NFW1 1626 aaPredicted RBP20.28■□□□□ 0.84
CCM2-207ENST00000475551 RGPD2P0DJD1 1756 aa20.28■□□□□ 0.84
CCM2-207ENST00000475551 MAGEA9P43362 315 aa20.28■□□□□ 0.84
CCM2-207ENST00000475551 ENOX1Q8TC92 643 aaKnown RBP20.28■□□□□ 0.84
CCM2-207ENST00000475551 PANX2Q96RD6 677 aa20.28■□□□□ 0.84
CCM2-207ENST00000475551 MKRN1Q9UHC7 482 aaKnown RBP20.28■□□□□ 0.84
CCM2-207ENST00000475551 A0A1B0GUL7 405 aa20.27■□□□□ 0.83
CCM2-207ENST00000475551 M0R2C6 588 aa20.27■□□□□ 0.83
CCM2-207ENST00000475551 MYL6BP14649 208 aa20.27■□□□□ 0.83
CCM2-207ENST00000475551 MDM2Q00987 491 aaPredicted RBP20.27■□□□□ 0.83
CCM2-207ENST00000475551 CHRNA2Q15822 529 aa20.27■□□□□ 0.83
CCM2-207ENST00000475551 IMMTQ16891 758 aaKnown RBP20.27■□□□□ 0.83
CCM2-207ENST00000475551 ANKRD13DQ6ZTN6 518 aa20.27■□□□□ 0.83
CCM2-207ENST00000475551 VPS37DQ86XT2 251 aa20.27■□□□□ 0.83
CCM2-207ENST00000475551 PNKPQ96T60 521 aa20.27■□□□□ 0.83
CCM2-207ENST00000475551 ZSWIM4Q9H7M6 989 aa20.27■□□□□ 0.83
CCM2-207ENST00000475551 RAI14Q9P0K7 980 aa20.27■□□□□ 0.83
CCM2-207ENST00000475551 KCNH3Q9ULD8 1083 aa20.27■□□□□ 0.83
CCM2-207ENST00000475551 NFE2L3Q9Y4A8 694 aa20.27■□□□□ 0.83
CCM2-207ENST00000475551 UBE3BQ7Z3V4 1068 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 NAA15Q9BXJ9 866 aaKnown RBP20.26■□□□□ 0.83
CCM2-207ENST00000475551 IRX2Q9BZI1 471 aaPredicted RBP20.26■□□□□ 0.83
CCM2-207ENST00000475551 DACH1Q9UI36 760 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 HOOK1Q9UJC3 728 aaKnown RBP20.26■□□□□ 0.83
CCM2-207ENST00000475551 MAP3K15Q6ZN16 1313 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 WDR19Q8NEZ3 1342 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 NR1I3Q14994 352 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 MLKLQ8NB16 471 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 FAM71BQ8TC56 605 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 NEUROD6Q96NK8 337 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 GBP3Q9H0R5 595 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 ABCB6Q9NP58 842 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 PUF60Q9UHX1 559 aaKnown RBP20.26■□□□□ 0.83
CCM2-207ENST00000475551 FAN1Q9Y2M0 1017 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 ADGRG1Q9Y653 693 aa20.26■□□□□ 0.83
CCM2-207ENST00000475551 AKR1B15C9JRZ8 316 aaPredicted RBP20.25■□□□□ 0.83
CCM2-207ENST00000475551 KIF5CO60282 957 aa20.25■□□□□ 0.83
CCM2-207ENST00000475551 TUBBP07437 444 aa20.25■□□□□ 0.83
CCM2-207ENST00000475551 ICE2Q659A1 982 aa20.25■□□□□ 0.83
CCM2-207ENST00000475551 MAN1B1Q9UKM7 699 aa20.25■□□□□ 0.83
CCM2-207ENST00000475551 CCDC9Q9Y3X0 531 aaKnown RBP20.25■□□□□ 0.83
CCM2-207ENST00000475551 NUTM2BA6NNL0 878 aaPredicted RBP20.25■□□□□ 0.83
CCM2-207ENST00000475551 NUTM2EB1AL46 878 aaPredicted RBP20.25■□□□□ 0.83
CCM2-207ENST00000475551 MTF1Q14872 753 aa20.25■□□□□ 0.83
CCM2-207ENST00000475551 NT5DC1Q5TFE4 455 aa20.25■□□□□ 0.83
CCM2-207ENST00000475551 NUTM2AQ8IVF1 878 aaPredicted RBP20.25■□□□□ 0.83
CCM2-207ENST00000475551 CLIC6Q96NY7 704 aa20.25■□□□□ 0.83
CCM2-207ENST00000475551 ALG1Q9BT22 464 aa20.25■□□□□ 0.83
CCM2-207ENST00000475551 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.25■□□□□ 0.83
CCM2-207ENST00000475551 SPEF2Q9C093 1822 aa20.24■□□□□ 0.83
CCM2-207ENST00000475551 ANTXR2P58335 489 aa20.24■□□□□ 0.83
CCM2-207ENST00000475551 FMR1Q06787 632 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCM2-207ENST00000475551 NCOA7Q8NI08 942 aa20.24■□□□□ 0.83
CCM2-207ENST00000475551 OSBP2Q969R2 916 aa20.24■□□□□ 0.83
CCM2-207ENST00000475551 C4AP0C0L4 1744 aa20.24■□□□□ 0.83
CCM2-207ENST00000475551 C4BP0C0L5 1744 aa20.24■□□□□ 0.83
CCM2-207ENST00000475551 DDX60Q8IY21 1712 aaKnown RBP20.24■□□□□ 0.83
CCM2-207ENST00000475551 N4BP1O75113 896 aaKnown RBP20.24■□□□□ 0.83
CCM2-207ENST00000475551 CASP7P55210 303 aa20.24■□□□□ 0.83
CCM2-207ENST00000475551 HSP90AA4PQ58FG1 418 aa20.24■□□□□ 0.83
CCM2-207ENST00000475551 ATG9AQ7Z3C6 839 aa20.24■□□□□ 0.83
CCM2-207ENST00000475551 AXIN2Q9Y2T1 843 aa20.24■□□□□ 0.83
CCM2-207ENST00000475551 ADAMTS7Q9UKP4 1686 aa20.23■□□□□ 0.83
CCM2-207ENST00000475551 SOWAHDA6NJG2 315 aa20.23■□□□□ 0.83
CCM2-207ENST00000475551 FOXP2O15409 715 aa20.23■□□□□ 0.83
CCM2-207ENST00000475551 IFIT1P09914 478 aaKnown RBP20.23■□□□□ 0.83
CCM2-207ENST00000475551 KRT40Q6A162 431 aa20.23■□□□□ 0.83
CCM2-207ENST00000475551 ZNF790Q6PG37 636 aa20.23■□□□□ 0.83
CCM2-207ENST00000475551 LZTFL1Q9NQ48 299 aa20.23■□□□□ 0.83
CCM2-207ENST00000475551 NWD2Q9ULI1 1742 aa20.23■□□□□ 0.83
CCM2-207ENST00000475551 A0A1B0GTH6 734 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 SARSP49591 514 aaKnown RBP20.22■□□□□ 0.83
CCM2-207ENST00000475551 CASP8Q14790 479 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 LRP10Q7Z4F1 713 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCM2-207ENST00000475551 PRDM11Q9NQV5 511 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 CPDO75976 1380 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 ZMYM6O95789 1325 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 EIF3CLB5ME19 914 aaKnown RBP20.22■□□□□ 0.83
CCM2-207ENST00000475551 HAND2P61296 217 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 TIMM10P62072 90 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 TTC31Q49AM3 519 aaPredicted RBP20.22■□□□□ 0.83
CCM2-207ENST00000475551 HSP90B2PQ58FF3 399 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 RAD9BQ6WBX8 426 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 RAB11FIP4Q86YS3 637 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 TRIML1Q8N9V2 468 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 EIF3CQ99613 913 aaKnown RBP20.22■□□□□ 0.83
CCM2-207ENST00000475551 BRMS1Q9HCU9 246 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 MED4Q9NPJ6 270 aa20.22■□□□□ 0.83
CCM2-207ENST00000475551 A0A087WZG4 1122 aa20.21■□□□□ 0.83
CCM2-207ENST00000475551 FOXN1O15353 648 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms