RNA–Protein interactions for RNA: ENST00000475074.1

IMP4-214, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-214ENST00000475074 FLT1P17948 1338 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 PITPNM2Q9BZ72 1349 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 ZNF213O14771 459 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 PRKAB2O43741 272 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 TNNI2P48788 182 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 KIF4BQ2VIQ3 1234 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 CREB3L3Q68CJ9 461 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 TTC6Q86TZ1 520 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 PNMA8AQ86V59 439 aaPredicted RBP13.16□□□□□ -0.3
IMP4-214ENST00000475074 ZC3H15Q8WU90 426 aaKnown RBP13.16□□□□□ -0.3
IMP4-214ENST00000475074 TGFBRAP1Q8WUH2 860 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 SDR42E1Q8WUS8 393 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 TM6SF1Q9BZW5 370 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 ZNF70Q9UC06 446 aaPredicted RBP13.16□□□□□ -0.3
IMP4-214ENST00000475074 HACL1Q9UJ83 578 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 ATRNL1Q5VV63 1379 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 DDX60LQ5H9U9 1706 aaKnown RBP13.16□□□□□ -0.3
IMP4-214ENST00000475074 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
IMP4-214ENST00000475074 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.3
IMP4-214ENST00000475074 SLC27A2O14975 620 aa13.15□□□□□ -0.3
IMP4-214ENST00000475074 SLC3A2P08195 630 aaKnown RBP13.15□□□□□ -0.3
IMP4-214ENST00000475074 CTR9Q6PD62 1173 aa13.15□□□□□ -0.3
IMP4-214ENST00000475074 FAM151AQ8WW52 585 aa13.15□□□□□ -0.3
IMP4-214ENST00000475074 OSBPL5Q9H0X9 879 aaPredicted RBP13.15□□□□□ -0.3
IMP4-214ENST00000475074 TDRD3Q9H7E2 651 aaKnown RBP13.15□□□□□ -0.3
IMP4-214ENST00000475074 ZNF287Q9HBT7 754 aa13.15□□□□□ -0.3
IMP4-214ENST00000475074 PPP2R3BQ9Y5P8 575 aa13.15□□□□□ -0.3
IMP4-214ENST00000475074 NAV1Q8NEY1 1877 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 USP17L12C9JPN9 530 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 USP17L21D6R901 530 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 CYP21A2P08686 494 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 HMGB1P09429 215 aaKnown RBP13.14□□□□□ -0.31
IMP4-214ENST00000475074 FGRP09769 529 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 PSMA5P28066 241 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 EPS15P42566 896 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 NBPF9Q3BBW0 867 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 C12orf60Q5U649 245 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
IMP4-214ENST00000475074 EHD4Q9H223 541 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 RNF41Q9H4P4 317 aaPredicted RBP13.14□□□□□ -0.31
IMP4-214ENST00000475074 CNNM2Q9H8M5 875 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 MCM9Q9NXL9 1143 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 FAM198AQ9UFP1 575 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 PGAP2Q9UHJ9 254 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 ROBO3Q96MS0 1386 aa13.14□□□□□ -0.31
IMP4-214ENST00000475074 LAMB1P07942 1786 aa13.13□□□□□ -0.31
IMP4-214ENST00000475074 PPARAQ07869 468 aa13.13□□□□□ -0.31
IMP4-214ENST00000475074 TBC1D10BQ4KMP7 808 aaPredicted RBP13.13□□□□□ -0.31
IMP4-214ENST00000475074 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
IMP4-214ENST00000475074 METTL16Q86W50 562 aaKnown RBP13.13□□□□□ -0.31
IMP4-214ENST00000475074 FOXP4Q8IVH2 680 aaPredicted RBP13.13□□□□□ -0.31
IMP4-214ENST00000475074 MAPKAPK5Q8IW41 473 aa13.13□□□□□ -0.31
IMP4-214ENST00000475074 STAG1Q8WVM7 1258 aa13.13□□□□□ -0.31
IMP4-214ENST00000475074 HOOK2Q96ED9 719 aa13.13□□□□□ -0.31
IMP4-214ENST00000475074 PCDHAC2Q9Y5I4 1007 aa13.13□□□□□ -0.31
IMP4-214ENST00000475074 SNX14Q9Y5W7 946 aa13.13□□□□□ -0.31
IMP4-214ENST00000475074 MYH1P12882 1939 aa13.13□□□□□ -0.31
IMP4-214ENST00000475074 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
IMP4-214ENST00000475074 HLA-DOAP06340 250 aa13.12□□□□□ -0.31
IMP4-214ENST00000475074 EPHX2P34913 555 aa13.12□□□□□ -0.31
IMP4-214ENST00000475074 PDE4BQ07343 736 aa13.12□□□□□ -0.31
IMP4-214ENST00000475074 NFIAQ12857 509 aa13.12□□□□□ -0.31
IMP4-214ENST00000475074 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
IMP4-214ENST00000475074 MTA3Q9BTC8 594 aa13.12□□□□□ -0.31
IMP4-214ENST00000475074 DDX4Q9NQI0 724 aaKnown RBP13.12□□□□□ -0.31
IMP4-214ENST00000475074 PI4KBQ9UBF8 816 aa13.12□□□□□ -0.31
IMP4-214ENST00000475074 SWAP70Q9UH65 585 aa13.12□□□□□ -0.31
IMP4-214ENST00000475074 UTRNP46939 3433 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 E7EWF7 191 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 ORC4O43929 436 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 EGFRP00533 1210 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 VEGFAP15692 232 aaPredicted RBP13.11□□□□□ -0.31
IMP4-214ENST00000475074 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
IMP4-214ENST00000475074 TRDNQ13061 729 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 PICALMQ13492 652 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 RABEP1Q15276 862 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 RBM26Q5T8P6 1007 aaKnown RBP13.11□□□□□ -0.31
IMP4-214ENST00000475074 MFSD6Q6ZSS7 791 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 KRT23Q9C075 422 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
IMP4-214ENST00000475074 HERC5Q9UII4 1024 aaKnown RBP13.11□□□□□ -0.31
IMP4-214ENST00000475074 BAZ2AQ9UIF9 1905 aaKnown RBP13.11□□□□□ -0.31
IMP4-214ENST00000475074 WDR19Q8NEZ3 1342 aa13.11□□□□□ -0.31
IMP4-214ENST00000475074 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 MINDY4BA8MYZ0 360 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 POTECB2RU33 542 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 TBC1D12O60347 775 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 MAP3K10Q02779 954 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 GABPAQ06546 454 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 C16orf86Q6ZW13 317 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 FBXL16Q8N461 479 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 NCOA7Q8NI08 942 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 TRPM4Q8TD43 1214 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 KIF2CQ99661 725 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 ALDH8A1Q9H2A2 487 aaPredicted RBP13.1□□□□□ -0.31
IMP4-214ENST00000475074 VEZTQ9HBM0 779 aa13.1□□□□□ -0.31
IMP4-214ENST00000475074 ZSWIM6Q9HCJ5 1215 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms